Os06g0506000

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Revision as of 09:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0506000| Description = Conserved hypothetical protein| Version = NM_001064254.1 GI:115468239 GeneID:4341130| Length = 1976 bp| Definition ...")
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Gene Name

Os06g0506000

Description

Conserved hypothetical protein

Version

NM_001064254.1 GI:115468239 GeneID:4341130

Length

1976 bp

Definition

Oryza sativa Japonica Group Os06g0506000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:18870240..18872215

Sequence Coding Region

18870336..18870629,18871672..18872169

Expression

GEO Profiles:Os06g0506000

Genome Context

<gbrowseImage1> name=NC_008399:18870240..18872215 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:18870240..18872215 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagattgcccgcatcgtcgtcgtcggcggcggggctgcaggagcgcatctgggacctccacgacaatctcagccacgccatcctctccctctccgcctccgcccaccgctgctgccgccgccgcgcccccgaagggcgcgtggtcgtcaaggggtggcggcggcagggaggatgtggggactgcggcctggagcaggaggcggctgcggcggccaccatggcggacgcgcggagccttcacgccgtccgcgccgcgctcgaggacctcgagggccacctccatttcctccacaacattcaattatgtcaggtggcagaacgagatgccgcgattgctaggctgcagcaaagtcgtattctgcttgctacaagattggctgaacataggtggaagaagcatgaagttattgaggaggccttagcttttgttgatgatgcgcttgacaagagtcgatttgtctcaccagaagatgtccgtgggacgcatacacacagccaatcagtagagaaccagtgccccaagatacatgattcaaacttcttggtgcgttttttatcctgtacattagctatagctaagaattctttaagatttgagaggattggtggtgcactcggtaataccgcgatgtttgcagtaagtatgcttgcattcttgcagctgcaacaagtggcctttggtaaacaaactccagcagtacaatgtagacgagtcaattattttcattctcagatgtctgtaaagaacactaaagaaaagcatctggtcgtattgttagctagaggatga</cdnaseq>

Protein Sequence

<aaseq>MRLPASSSSAAGLQERIWDLHDNLSHAILSLSASAHRCCRRRAP EGRVVVKGWRRQGGCGDCGLEQEAAAAATMADARSLHAVRAALEDLEGHLHFLHNIQL CQVAERDAAIARLQQSRILLATRLAEHRWKKHEVIEEALAFVDDALDKSRFVSPEDVR GTHTHSQSVENQCPKIHDSNFLVRFLSCTLAIAKNSLRFERIGGALGNTAMFAVSMLA FLQLQQVAFGKQTPAVQCRRVNYFHSQMSVKNTKEKHLVVLLARG</aaseq>

Gene Sequence

<dnaseqindica>97..390#1433..1930#aaaaaaataaaaaaaaaaccggcttctccgcctatcgtgcccaggtgtgcgcggctctcttctcctccatcggcgacgagccactcctgcgatgagatgagattgcccgcatcgtcgtcgtcggcggcggggctgcaggagcgcatctgggacctccacgacaatctcagccacgccatcctctccctctccgcctccgcccaccgctgctgccgccgccgcgcccccgaagggcgcgtggtcgtcaaggggtggcggcggcagggaggatgtggggactgcggcctggagcaggaggcggctgcggcggccaccatggcggacgcgcggagccttcacgccgtccgcgccgcgctcgaggacctcgagggccacctccatttcctccacgtcagtatcctcctctcctccttaattcttgattttttgtttactttgtacaagaaccatctccacttgatgatactacaaatgtagggaagagcttctgttacttcgtggcctcggattgccatgataattaattgatgaatttctgagctaaccaatccgcgctgattccaccatccaaatcgatgaatcgagattactttggtacaattggtactgttcattaagagaacaagctggatgtacacgcttgtatgcttgtttgatccacaaatttttaattctttgaccgttcgtcatggttgcgcagatggaaagaaccaaacttaagccacatcgttgtgagctgtatgctagccttggtttgttcttgttgtttgcgtcccttatgtctcattgccacccgtcatcgtgttctctcggaaccattttgtcctcctgtgatttgtaggtccacaactccagatgggttggactgtaagcacaattcactgtagaatgcaggtgttcatttaagcagtcgtgttggcattctctttcatgctctataagatgccaatctatatgggggtgatcttatctgtttgatagggacacgtcgtttccttatagccaataattgtatgaagaaattcaattggtagaggtgactaaccatgtagcttgctgtcttctggcttatgtttgttagctatatgtaagtagcttgttgtcccaggttgatggtttcaaccgggactctgaaaaattaaactgtagctttgtactttatttcttttcaaggtataatacgatctgtctaattttttttttgtttagatcctcacaataagctgaagcttagcttgagttatcacatttctcttgtgaaaagaaaagctgtcttatttctacatgatcgaaagttatcatttttgcatatttgtttttcaagcatgtagcttatgacctgctagatactagattatggagttctccagcaccatctaattaaattatccaaaaaataacatggtgcctattgtgtcaacaatacttgcagaacattcaattatgtcaggtggcagaacgagatgccgcgattgctaggctgcagcaaagtcgtattctgcttgctacaagattggctgaacataggtggaagaagcatgaagttattgaggaggccttagcttttgttgatgatgcgcttgacaagagtcgatttgtctcaccagaagatgtccgtgggacgcatacacacagccaatcagtagagaaccagtgccccaagatacatgattcaaacttcttggtgcgttttttatcctgtacattagctatagctaagaattctttaagatttgagaggattggtggtgcactcggtaataccgcgatgtttgcagtaagtatgcttgcattcttgcagctgcaacaagtggcctttggtaaacaaactccagcagtacaatgtagacgagtcaattattttcattctcagatgtctgtaaagaacactaaagaaaagcatctggtcgtattgttagctagaggatgaggaaatcatcattgtttgatgtatagataagttttgttctgttcac</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0506000, RefSeq:Os06g0506000