Os06g0508700

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Revision as of 09:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0508700| Description = Similar to Scye1-prov protein| Version = NM_001064264.1 GI:115468259 GeneID:4341140| Length = 8981 bp| Definition =...")
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Gene Name

Os06g0508700

Description

Similar to Scye1-prov protein

Version

NM_001064264.1 GI:115468259 GeneID:4341140

Length

8981 bp

Definition

Oryza sativa Japonica Group Os06g0508700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:19022515..19031495

Sequence Coding Region

19022900..19023130,19023224..19023325,19023420..19023649,19026410..19026536,19026632..19026775
,19026852..19026980,19027067..19027132,19027283..19027401,19027584..19027698
,19027773..19027879,19028957..19029047,19029675..19029818,19029897..19030127
,19030240..19030395,19030477..19030630,19031120..19031157

Expression

GEO Profiles:Os06g0508700

Genome Context

<gbrowseImage1> name=NC_008399:19022515..19031495 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:19022515..19031495 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggagaagtgctcgcccaaggagatctgcgacaagtatcatgctgtccatagtgaggtttacaaatggtttgacataaagtttgacaagtttggacggacatcctctccccaacagactgaagtctgccaagcaattttccaaaagttgatggaaaacaattggctcacagaaaacaccatgcagcagctgtactgtgatacttgccaacgatttttagcggataggctcgtggaggggaaatgtccaactgaaggctgtaattatgaggcggcgcgaggtgatcagtgtgaaaactgcagcaaattgttgaatccaactgagctaattgatcccaagtgtaaggtctgtaagaatactccacgtgtccgtgacacagatcacttattccttgagcttcctcttttgagcgacaagttggtaaactatatcaatgaaacttctgtagctggtatgtggagtcaaaatgctattcaggcaacaaacgcatggctgaaggaaggtttgaagccacgctgtatcacccgagatctcaagtggggtgttcctgttccacatgagaaatataaggacaaggtgttctatgtttggtttgatgcaccgattggctatgtatctatcacagcttcctatacacctgattgggagaaatggtggaaggatcctgataacgtagaattgtttcagttcatgggtaaagataatgtgccatttcacacggtcatgttcccttctacattacttggaactggcgaaaagtggacaatgatgaagaccataagtgtgactgaatatttgaactacgaagcaggaaaattctccaagagccatggtattggagtctttggtaatgacgcgaaggatacaaatatacctcctgaagtgtggcgttactacttgcttacaaatcgtcctgaggtatcagatacactatttacttgggctgatttgcaagccaaattaaacagtgagttgttgaacaacttggggaatttcatcaaccgtgtgctcagttttgttgcaaaaccagcaggagccggatatgattccatcgtacctgatgctcctaacgctgagtcgcatccactgacaaaggcacttgttgagaaaactaataaatgggttgaacaatatcttgaagcaatggaaaaggttaaattgaaacaaggactgaagagcgctatgggcatttctagtgatggaaatgcatatctgcaagagagccagttttggaaactttataaggaagatccagcagcctgtgctgttgtaatgaaaacttcagttggtgtggtctatctccttgcctgtttgctggagcctttcatgccttcattttccaatgaagtgttgctgcaattaaatatgacccctgaagaaagcttgtctttctgtgacgataaaggagaaatcgccaaggcaaaaagaccttgggattttgtatcagcaggccacaaaataggaaagccttcacctctatttaaagaactgaaagatgaagaagtagagtccttcaggaataaatttgcaggcagccaagctgagaggagctcaaaagcacaagctgatgctgaagctaagaaggttgctgacaagctcaagggcacaaaattatctgatggaggtcaaaagaaggaacagaaaaaacaatcaggtggttcaaaatcaaagaatgcagaggtggatgtcacggtggcaaagttggatattcgagtggggcttatcaggaaagcacagaagcatccagatgctgattcgctgtatgtagaggagattgatgttggagaggaagcaccaagaacagttgttagcggccttgtcaaattcatccctcttgaagaaatgcagaaccggaaagtgtgtgttctctgcaatctgaaaccagtggcgatgcgcggtataaaatcacatgcaatggttctggctgcatcaaatgaggaccatacaaaggttgagctggttgagccaccagaatccgcagcggttggggagagggtgacctttgctgggtactctggagagcctgaggcgtctctcaacgcaaagagcaagacgtgggagaagctatcagctgacctgcacagcaacggcgagctcgtggcgtgctacaaggatgtacccttcacaacttcagctggagtttgcaaggtgaagtcgatagcgagtggagaaattcgctag</cdnaseq>

Protein Sequence

<aaseq>MEEKCSPKEICDKYHAVHSEVYKWFDIKFDKFGRTSSPQQTEVC QAIFQKLMENNWLTENTMQQLYCDTCQRFLADRLVEGKCPTEGCNYEAARGDQCENCS KLLNPTELIDPKCKVCKNTPRVRDTDHLFLELPLLSDKLVNYINETSVAGMWSQNAIQ ATNAWLKEGLKPRCITRDLKWGVPVPHEKYKDKVFYVWFDAPIGYVSITASYTPDWEK WWKDPDNVELFQFMGKDNVPFHTVMFPSTLLGTGEKWTMMKTISVTEYLNYEAGKFSK SHGIGVFGNDAKDTNIPPEVWRYYLLTNRPEVSDTLFTWADLQAKLNSELLNNLGNFI NRVLSFVAKPAGAGYDSIVPDAPNAESHPLTKALVEKTNKWVEQYLEAMEKVKLKQGL KSAMGISSDGNAYLQESQFWKLYKEDPAACAVVMKTSVGVVYLLACLLEPFMPSFSNE VLLQLNMTPEESLSFCDDKGEIAKAKRPWDFVSAGHKIGKPSPLFKELKDEEVESFRN KFAGSQAERSSKAQADAEAKKVADKLKGTKLSDGGQKKEQKKQSGGSKSKNAEVDVTV AKLDIRVGLIRKAQKHPDADSLYVEEIDVGEEAPRTVVSGLVKFIPLEEMQNRKVCVL CNLKPVAMRGIKSHAMVLAASNEDHTKVELVEPPESAAVGERVTFAGYSGEPEASLNA KSKTWEKLSADLHSNGELVACYKDVPFTTSAGVCKVKSIASGEIR</aaseq>

Gene Sequence

<dnaseqindica>8366..8596#8171..8272#7847..8076#4960..5086#4721..4864#4516..4644#4364..4429#4095..4213#3798..3912#3617..3723#2449..2539#1678..1821#1369..1599#1101..1256#866..1019#339..376#cgccgccgccgcctccgaagctgccggtccccggccgccgcaacatcctcgtcaccagcgcgctgccctacgtcaacaacgtccctcacctcgggaacatcatcggctgtgagcctcctccctcgattttgctttttgtttgttagctttccttgcgctgacggattcagctagttcttgctgctgattgattggttgattgattgattgatggtggcggttgcgatgcaggcgtgctcagcgccgacgtgttcgcgcgctactgccggctgcggggctacaacgtcatctacatatgcggcaccgacgagtacgggacggccaccgagaccaaggccatggaggagaagtgctcgcccaaggagatctgcgacaagtgagagaggcttcaccttccctctgcttctaatttaatttggtctctctcaccctgttagtaatcgtatataggattttgtctgggtttattataattttggttgcgatggcactagttagtacaaaaacagtgtggtttagcttcaatatgagctgacgaattgaattgactagtcgcagcagatgcacttatagattttttattttccatgacactcatcgacagtggcggttggtggtcgcactctctgcttacaaccataagattatgcgcattaagtaatatgacgtgccaagtatgttcgtaaacaattgaaagtgatgtagagtgacagatcccataatttttggaaagaccatcgcaaacttttttttagttgtagttcacaaatgcatgagtcagttgcctttctttcatgtcctgtaaacttagcacatgaaaagcgaaggcattttcttcatagagagcttttcctgttgaaaataggtatcatgctgtccatagtgaggtttacaaatggtttgacataaagtttgacaagtttggacggacatcctctccccaacagactgaagtctgccaagcaattttccaaaagttgatggaaaacaattggctcacagaaaacaccatgcagcaggtatagatgattcttggtcttatccctgtgtatctgtcttttcatattctatcttttacacaatatatattccttttgcagctgtactgtgatacttgccaacgatttttagcggataggctcgtggaggggaaatgtccaactgaaggctgtaattatgaggcggcgcgaggtgatcagtgtgaaaactgcagcaaattgttgaatccaactgagctaattgatcccaagtgtaaggtaagctaatttgttcattgagcatcatttttttattgctgcatgatacaaagcacatagagtactgtgaagttttaattatgctttccttttgccctctatctttctgtaggtctgtaagaatactccacgtgtccgtgacacagatcacttattccttgagcttcctcttttgagcgacaagttggtaaactatatcaatgaaacttctgtagctggtatgtggagtcaaaatgctattcaggcaacaaacgcatggctgaaggaaggtttgaagccacgctgtatcacccgagatctcaagtggggtgttcctgttccacatgagaaatataaggacaaggtttgtgcatatcagatctgaagaagtcctgcttatgttctatttactttatctctaatgatttttttttatttttaggtgttctatgtttggtttgatgcaccgattggctatgtatctatcacagcttcctatacacctgattgggagaaatggtggaaggatcctgataacgtagaattgtttcagttcatgggtaaagataatgtgccatttcacacggtatgaattgtttctgttcatggcatatgaattatgaacatttttagtttttcattacgttttggatgtgaatgtatgaataattagttttccatgagtacatgtttgtaaatattgttgtatttaactacttagtcaagataatattatctcaaatgtttaactgagttagctttctctgaaaaaaagacgaattctgacttatatcttaaacgcctgattggtctctatccaacttggttatatgattgatagtatggtattaatttgtaatttgatgatttgtttgatacttcaattcatgaacttgatggttactacgaaaggactataaacccacaagctttatatcctttaagccttcaatggtcagtttgggggttgttgtacatgtgctttgtggacctagttatggccttatgagaatagttgccccctccatctaatctactgctatagcaaaatatactgtcaggtagtttatcaaagtaaaaaatacaagatcttttgcaaatgcagccatgtcaaaatggagcctaatatatatgtcatttactcattttgcaaatactagttattgttctcatgcttctaattattaaccatgaactacttatttaatgaaaggtcatgttcccttctacattacttggaactggcgaaaagtggacaatgatgaagaccataagtgtgactgaatatttgaactacgaagcaggtattgctgctacagtttttttttaaccaaaatgcttgattgacaaagagtccatattattggtaactggtaaatggtaaatacttgtttgcttatgtgagctcaggagcccgtggaattcatagacttttatcaaccaaatttgccgtgcccatttatttgaaccaaaacatgttattttctctctgctgaataatattagttactccctctatcccaaattataaggcctatatttttttacacggtcttcagtgacatactttgaccagtaatttattccatgttatgttcccaactaatataaaaattagcatcacatgaaagtacatcaaaatatgaatctagtgatataacattcataatacttagcatagatatgtttagtatgattattagtcaaaagctaccgagtttgacaaagagaagtattgaattggattgaagattctcatcccaagaatatttaagacattacattttatggcaccctcagacctgagttttattacctattttattccaccaatctctttcaaacatgcttcttttcatccattacactggactgcaaatttaaacaatggtgactaaaatttaacggtgtctgtagactaaaactgtcatttgattgaagtctgatatatgcctatgttctaacatgtaactttccctccgtttcaagttacttgccattctagctttgttgtaagtaaacatttatatctttgaccaccaatttctagaaattcatatagtttaacaacatgcaaattatccaatgaataacataaatattatgatgttaaactatatggatttccagaaattgatggtcaaggtacaaaccttttgacttacaacaaaactagaatggcaagtaatttgaaacggagggagtacttattcacaaaggatgccgtatttccttgcatgagcattatctgaacagaaaatcccatactgctttgcatgagctttatctaaacatgctgagttgctgaccaagatgcatgcatgataagacaaacatgcacatctatgtggataataattgaatattcattgcacttgaaggaaaattctccaagagccatggtattggagtctttggtaatgacgcgaaggatacaaatatacctcctgaagtgtggcgttactacttgcttacaaatcgtcctgaggtttgtattgaatggtacactgtaatggtacagtgtttaagttttttgtcctaactatcatctttttaattcaggtatcagatacactatttacttgggctgatttgcaagccaaattaaacagtgagttgttgaacaacttggggaatttcatcaaccgtgtgctcagttttgttgcaaaaccagcaggtcagtctagatgtcttaatacctggcatcttactttctttaaggactattaattgagtttggtatttttctcatagagtttagataggccataagtgatcagtcgccattatcttgttcttacctccaaacttttgttttatgttcattatgtttctttcttttttttctttttttgttaggagccggatatgattccatcgtacctgatgctcctaacgctgagtcgcatccactgacaaaggcacttgttgagaaaactaataaatgggttgaacaatatcttgaagcaatggaaaaggttatctatcaatctgttatcgtaggaaatgacacattcctatgcttcctgcttaacatcctgtcaattcttcttccttttttcttttttcttttggtttagcaagctagtaggttttggaacatatgtttaatagttttttcttgacaggttaaattgaaacaaggactgaagagcgctatgggcatttctagtgatggaaatgcatatctgcaagtaagtaatttgttttattgtcatggttttcgtttagtctattttaagtaacacttttatatcttcaattcgctaactgagtgcaggagagccagttttggaaactttataaggaagatccagcagcctgtgctgttgtaatgaaaacttcagttggtgtggtctatctccttgcctgtttgctggagcctttcatgccttcattttccaatgaagtatgatccttgtcatcactgaaacatgtctgagtttttataagagagccgaatctcacttcatttttttcataaggtgttgctgcaattaaatatgacccctgaagaaagcttgtctttctgtgacgataaaggagaaatcgccaaggcaaaaagaccttgggattttgtatcagcaggccacaaaataggaaagccttcacctctatttaaagaactggtacatatttgcaatttttgtaacttcttgcaacttttgtgacttttttctgtagtctgtcaaagctttacatctcttgacctcattggatgcagaaagatgaagaagtagagtccttcaggaataaatttgcaggcagccaagctgagaggagctcaaaagcacaagctgatgctgaagctaagaaggttgctgacaagctcaagggcacaaaattatctggtaattatctggacattgttacactgttctgattaaattgcttgcttgaatcagaacaaaagccagcttttctttgtttcacattcagcaagtggatgaaatccattgttaatggagttaataattaatataatatgaatgaagcactaagagcatctccaacagaggcccaaaagttagttcctaaaacctatggattgagacaattaagttagttcctaagacctatggattgggacaatttcaaaaaaatttaggtccaaaatatgtttatctccaagagatcctaaaaaaaaaataaaatatctctatctccaagagatgcctaaaaatagaatcccaaatattagtttgttgacacgtaggattaaattagttagttgaccaggtaggattggatgtgccatggttgttaccgattttttcttatacctgcacacaggtcaaatcgctcccctgccgctgcccttctggacgcctccagctcctgccgccgctagaaaaacctcacccaccagccattgtggtattgacggatgattccacatctaatgtggaaaaacagagggattagttgatcctctacatgaccatgcgatattaacatgtagattgatgacatcgtctagaggatcaactaggccttccgtttttctgcggcattcagaaagggcagcggcagggggagtgatctgttctgatccatgcgcatgttaaaaaaaaatcggtaacaaccatgggcccaatcctacgtggtcaactaactcatttttgggattctattttaggtatctcttggagatggaacatattttcccaatctataggttttaggaattatttttgggcctctcttggagatgctcttatggcgcgatttgctcttatagcgcgatttgtgcgattgggagggtgcaccgctcttatggcgcgatttgctcttctagcatgatttgtgcgattgggagggcgtaccgcttcccaaatcctgggtgggattggcgtgtgggtaaattttgggaccatgatttaaagtctgttagagcatcagcaagagcttccttattctattccttatcctcatttaggaaattttggtccaaaatcgcatccaagaaattccctaacctatctcccaataatccatgttcccaactccggatatctcgttacccacttctagcaagcgacttttcttcccaatcacgttcttcgctctcgcgcgcgcagggggaaaatgtgcccgcgctccttttctcgccgcactcggtcgcgactgcagcgaccgtcgtcggcggagacaaagcagctagcggagaggggaattaggggagatcagcgaccatttggcggctcgaacagatcggcttcggtggagaaaaatcgcgagagagatgaggagatcggcatctggtgcacacttggggaggggaggggagaaaaactttttttttattggtggttaaagggattgcccacttttaattataggaaatcggcatctggcgcacacttaggggatgggacgggagaaaaactttttttttctattggtggttaaaggggtggcccacttgtaattataggaaatcaattttaggctatctcttggagagatatgcagttcaggagatcaaaaaaaagtttagggaacgaaatattaggagcatcaccaagagtatcccagtaatcaattcccaaaactatattttttggatctcctaaacttaatataggaagtgagaaaacctatctctccaagagagagcctaaaattgatttccctataatgaaaagtgggacctccctttaactaccaacagtttttctgctcctccctacgccgatctcctcccctatgcacgcactgcgccaagtcagctcctccatctcgcgattttttttctccgtgcgcgcaggagagaacgattgggaacaaaaaaatcgctcccttcaagtggggaacgaaatatccagagttgggaatttggattattgggagacaggttagggattctgttggatgtgaattttgaccaaaatttcctaaatctgatgatagggaatagaataaggaagctgttggtcatgctttagatgactaaatttaaccaaagtccccaaaatttagtttttaggaacatgtttggtcctctcttggtgatactctaatgagcgggatcggtttttaatgtgtgatgccattgacttttggaaatacgtttgaccattcatcttattcgaaaaatgtgtaattatgatttatcttgttgtgatttgttttatcattaaagatactttaagcatgactttattttagcttgtttgcacaaaatttttgaataagatgaatcgtcaatggcatcaaacattaaaaattggagggagtagttcatatactccctttcatttttccaaatacaagcattagtaagttatttagcagagataatttgagaagaaaagataataagaggtggttgggatggggtggtggttgagagtaagattggggagaaatttgatcgagtgattgatgggactattagtactttaggaatgcttatattgtctacaaaaattgaaccctaggaatcctaggaacggagggagtatttccttgcaacaatgtatgggacaggggcatctgtcatggcaaactgtgtacacattgcatctgtttgatgtgctcaattttcttgagtcatttgaaaattccatcaactcattggctagtttccttttcatcatcttatccagatggaggtcaaaagaaggaacagaaaaaacaatcaggtggttcaaaatcaaagaatgcagaggtggatgtcacggtggcaaagttggatattcgagtggggcttatcaggaaagcacagaagcatccagatgctgattcgctgtatgtagaggagattgatgttggagaggaagcaccaagaacagttgttagcggccttgtcaaattcatccctcttgaagaaatgcaggttaatatttttaacatcgtgtgtagtcataacatagatatggtcatttggttgcttgaatttcatttatttttcatttatgataaattttcagaaccggaaagtgtgtgttctctgcaatctgaaaccagtggcgatgcgcggtataaaatcacatgcaatggttctggctgcatcaaatgaggaccatacaaaggtaagaaatcagaaatcttcagcagtacattacactgtgtgcgaccagtagcattcagctctgtttatggataagctgacatttgaaattcaggttgagctggttgagccaccagaatccgcagcggttggggagagggtgacctttgctgggtactctggagagcctgaggcgtctctcaacgcaaagagcaagacgtgggagaagctatcagctgacctgcacagcaacggcgagctcgtggcgtgctacaaggatgtacccttcacaacttcagctggagtttgcaaggtgaagtcgatagcgagtggagaaattcgctagcttggcgacgcccctaacggtggggatatactcgagtgacttgtttgactgatttttatcggaattgctgctgtttctttatgatgaaaattttgatcctgccatttgaaaggtcttgtatttgacaactgccagtatcaagtattgtccgcatttgtgtcatcgtgattatgaagacgcatggataaccgtttgtttcccttgtaatgttgtagacttcttgtagtaaccttttacaattcgtcgtacccctcatgtcttcaatcgtgtcgtcgtgtgcgttggacgtgtcaggagcacagttgggctgaatatgtgctgatcggccacgttccaaaccaggccaggcctgtttattcccaaacaaaaattattcaccttgtca</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0508700, RefSeq:Os06g0508700