Os06g0513943

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Revision as of 09:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0513943| Description = Similar to Ligatoxin B| Version = NM_001187889.1 GI:297724908 GeneID:9268035| Length = 1078 bp| Definition = Oryza ...")
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Gene Name

Os06g0513943

Description

Similar to Ligatoxin B

Version

NM_001187889.1 GI:297724908 GeneID:9268035

Length

1078 bp

Definition

Oryza sativa Japonica Group Os06g0513943, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:19492729..19493806

Sequence Coding Region

19493008..19493108,19493222..19493290,19493472..19493709

Expression

GEO Profiles:Os06g0513943

Genome Context

<gbrowseImage1> name=NC_008399:19492729..19493806 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:19492729..19493806 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaaggagtgaagagtttgatcatgtgtatgctagtgctaggcttagtcctgcaacaagagaagatccaggtggaagcaaagagttgttgcccatccaccacagcaagaaacgtctataactcatgccgtttcgcgggtggctcaagagacacctgtgctaaactttctggctgcaaaattgttgatgggaactgcaagcctccttacgttcaccatacccttcacccagaagctgaggaatcggaggtagttgacttctgcaagctgggatgtgcttcgtctgtgtgcagcaccatgagcactctttttggcaatgaagaagccaatcatgccgtcgatcgttgcaacgaagcatgccgccgcttctgtaccaaggaagctgagactgtcaccgttgtttcctaa</cdnaseq>

Protein Sequence

<aaseq>MEGVKSLIMCMLVLGLVLQQEKIQVEAKSCCPSTTARNVYNSCR FAGGSRDTCAKLSGCKIVDGNCKPPYVHHTLHPEAEESEVVDFCKLGCASSVCSTMST LFGNEEANHAVDRCNEACRRFCTKEAETVTVVS</aaseq>

Gene Sequence

<dnaseqindica>699..799#517..585#98..335#gcacaaccacaagaccaagaaagcagtagcctttcagccctcttgctttagtttgttgatccgcgactaaatctcattggaaaacaagctagaaagcatggaaggagtgaagagtttgatcatgtgtatgctagtgctaggcttagtcctgcaacaagagaagatccaggtggaagcaaagagttgttgcccatccaccacagcaagaaacgtctataactcatgccgtttcgcgggtggctcaagagacacctgtgctaaactttctggctgcaaaattgttgatgggaactgcaagcctccttacgttcaccatacccttcacccagaagctggtaaattagaaacattagctctccttgtctatatttctatcttgcattcaccacgcccttcaccccagctaacctaggcaaattaaaacatattaactccctttgtgtaaacttttgggctattaattttgtaatatctattggtacaagcatttattcatgcatatacatgattttgcagaggaatcggaggtagttgacttctgcaagctgggatgtgcttcgtctgtgtgcagcaccatgagcactcgtaagcgagaaaaaacatcaagctaaattaccattgatttgcaaccaaaaaaataaatattctttgttctatatagctaatgtatagattgaaacgtttgttttccttttcagtttttggcaatgaagaagccaatcatgccgtcgatcgttgcaacgaagcatgccgccgcttctgtaccaaggaagctgagactgtcaccgttgtttcctaagcaagtgcaacatgcaagcataaggggcttcacacatggaagcccatggtaggctatgccaccctggagtagtcataaataaaatggatatcatgatatccaatccagtgtgccatcgatctctcttgatttctgtcacgttgtatttccaataagctatgataatcacgatctgccatcatatattatcttttcttgaggatgtgagcatatgtagagtgatgatatcattgcctaagaaataaatcttgtcatcgggatggatcccttttgttaaag</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0513943, RefSeq:Os06g0513943