BGIOSGA034992

From RiceWiki
Revision as of 18:18, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA034992

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA034992, complete gene.

LocusTag

OS11G0207100

Ensembl Transcript ID

BGIOSGA034992-TA

Ensembl Protein ID

BGIOSGA034992-PA

Length

6134

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:4915463..4921596

Sequence Coding Region

4915463..4915822,4915917..4916036,4916214..4916262,4916339..4916553,4916658..4916726
,4916851..4916945,4919586..4919679,4919893..4919962,4920581..4921596

Genome Context

<gbrowseImage1> name=IndicaChromosome11:4915463..4921596 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:4915463..4921596 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCAGCAGAGTTCAGACCCATCAGCATTCCTGCAACAGCAACAGCAGCAGCAACATTTGCTGCAGCTGACAAAGCAGAATCCTCAAGCTGCTGCGGCAGCTCAACTGAACCTTTTGCAACAGCAACGGATATTGCAAATGCAGCAACAACAGCAGCAACAACAACAGATTCTAAAGAATCTGCCTTTGCAGAGAAACCAATTACAACAGCAACAACAGCAGCAGCAGCAACAGCAGCAGCTACTTCGCCAACAGAGTCTAAACATGAGAACTCCAGGAAAATCGGCTCCTTATGAGCCAGGAACCTGTGCAAAGAGATTGACTCATTACATGTATCATCAACAAAACAGGCCACAGGATAACAATATCGAGTACTGGAGAAACTTTGTCAATGAGTATTTTTCTCCAAATGCTAAAAAAAGGTGGTGTGTATCTCTCTATGGAAGTGGTCGTCAAACTACTGGAGTTTTCCCTCAGGATGTATGGCATTGTGAGATATGCAATCGGAAGCCTGGGCGAGGCTTTGAGACCACCGTTGAGGTGTTACCACGATTATGCCAAATTAAATATGCCAGTGGTACATTGGAAGAATTACTATATGTCGACATGCCACGTGAATCGCAGAATGCCTCTGGTCAGATTGTTTTGGACTATACCAAAGCAATCCAGGAAAGTGTCTTTGAGCAGTTGCGTGTGGTACGCGAAGGACATCTAAGGATAGTTTTTAATCCTGATCTCAAGATCGCTTCTTGGGAGTTTTGTGCAAGGCGTCACGAGGAGCTTATTCCACGTAGATCAATAATACCACAGGTTAGTCAACTGGGCGCAGTTGTGCAAAAATACCAGAGTGCTGTTCAAAATTCGACAAATTTGTCAACTCAAGACATGCAGAATAATTGCAACTCGTTTGTTGCATGTGCCCGCCAATTGGCTAAAGCACTGGAGGTGCCTTTGGTAAATGATCTGGGATACACAAAACGATATGTGCGCTGCCTTCAGATTGCTGAGGTGGTAAACTGTATGAAAGATTTGATTGATTATAGCAGGCAAAATGGGTCTGGACCAATTGCTAGTTTGCATAGCTTTCCTCGGAGGACTTCATCAGGAGGGGTAAACCCTCAACAGTCACAGCAGCAACAGCCTGAAGAACAGCAATCTATCCCGCAGAGTTCAAACCAGAGTGGTCAAAATGCTGCTCCCATGACTGGTGTGCAGGCTTCTGCCTCTGCAAATGCAGATGTGACATCAAATAATTCTCTCAGCTGTGCACCCTCAACGTCTGCACCTTCACCGTCCGTTGTTGGGCTCCTCCAAGGTTCAATGAACTCTAGACAAGATCATCCAATGAGCAGTGCTAATGGTCCATATACCAGTGGAAACAGTGCTGCAATTCCCAAGGTGAACTCGACAACCTCACTGCAGTCAACTCCATCTACCTCTTTTCCTTCACCAGTGCCAACAACATCCAATAACAACATGATGCCTGCCCCTCAGAACACAAACCAACTCAGCTCCCCAACCGCATCATCAAACCTACCGCCAATGCAGCCACCTGCTACTCGACCTCAGGAGCCTGATCCAAATGAGTCCCAAAGCTCGGTTCAGAGAATATTGCAAGATTTGATGATGTCACCGCAGATGAATGGTGTTGGCCAGCTTGGGAATGACATGAAAAGACCGAACGGACTTACATCTAGTGTTAACGGAGTTAATTGTTTAGTTGGTAATGCTGTTACAAATAACTCAGGAATGGGAGGAATGGGAGGAATGGGGTTTGGGGCCATGGGTGGGCTTGGTCCAAATCATGCAGCTAGTGGATTGAGAACTGCAATAGCGAACAATGCGATGGCAATTAGTGGTAGGATGGGAATGAATCACAGTGCACATGACCTATCACAGTTGGGCCAACTACAGCAGCAACAGCAACAGCAACATCAACATCAACATCAACATCAACATCAACATCAACAGCAACAGCAGCAGCAGCAGCAGCAGCAACATGACTTAGGAAACCAACTGTTGAGTGGACTTAGAGCAGCAAACAGCTTCAATAACCTTCAGTATGACTGGAAACCATCTCAATAA</cdnaseq>

Protein Sequence

<aaseq>MEQQSSDPSAFLQQQQQQQHLLQLTKQNPQAAAAAQLNLLQQQRILQMQQQQQQQQQILKNLPLQRNQLQQQQQQQQQQQQLLRQQSLNMRTPGKSAPYEPGTCAKRLTHYMYHQQNRPQDNNIEYWRNFVNEYFSPNAKKRWCVSLYGSGRQTTGVFPQDVWHCEICNRKPGRGFETTVEVLPRLCQIKYASGTLEELLYVDMPRESQNASGQIVLDYTKAIQESVFEQLRVVREGHLRIVFNPDLKIASWEFCARRHEELIPRRSIIPQVSQLGAVVQKYQSAVQNSTNLSTQDMQNNCNSFVACARQLAKALEVPLVNDLGYTKRYVRCLQIAEVVNCMKDLIDYSRQNGSGPIASLHSFPRRTSSGGVNPQQSQQQQPEEQQSIPQSSNQSGQNAAPMTGVQASASANADVTSNNSLSCAPSTSAPSPSVVGLLQGSMNSRQDHPMSSANGPYTSGNSAAIPKVNSTTSLQSTPSTSFPSPVPTTSNNNMMPAPQNTNQLSSPTASSNLPPMQPPATRPQEPDPNESQSSVQRILQDLMMSPQMNGVGQLGNDMKRPNGLTSSVNGVNCLVGNAVTNNSGMGGMGGMGFGAMGGLGPNHAASGLRTAIANNAMAISGRMGMNHSAHDLSQLGQLQQQQQQQHQHQHQHQHQHQQQQQQQQQQQHDLGNQLLSGLRAANSFNNLQYDWKPSQ</aaseq>

Gene Sequence

<dnaseqindica>1..360#455..574#752..800#877..1091#1196..1264#1389..1483#4124..4217#4431..4500#5119..6134#ATGGAGCAGCAGAGTTCAGACCCATCAGCATTCCTGCAACAGCAACAGCAGCAGCAACATTTGCTGCAGCTGACAAAGCAGAATCCTCAAGCTGCTGCGGCAGCTCAACTGAACCTTTTGCAACAGCAACGGATATTGCAAATGCAGCAACAACAGCAGCAACAACAACAGATTCTAAAGAATCTGCCTTTGCAGAGAAACCAATTACAACAGCAACAACAGCAGCAGCAGCAACAGCAGCAGCTACTTCGCCAACAGAGTCTAAACATGAGAACTCCAGGAAAATCGGCTCCTTATGAGCCAGGAACCTGTGCAAAGAGATTGACTCATTACATGTATCATCAACAAAACAGGCCACAGGTAAGTTTTCGGCTTTTTCCAAACAATTAATTTAGTGTATAGTGAAGGCCATGGGCTTACAGTTTTGTGTCTCTACTTGTTCCTTTTGATGCAGGATAACAATATCGAGTACTGGAGAAACTTTGTCAATGAGTATTTTTCTCCAAATGCTAAAAAAAGGTGGTGTGTATCTCTCTATGGAAGTGGTCGTCAAACTACTGGAGTTTTCCCTCAGGTTTCATGAGCCGTTGCTGACTTGTCATTTTTTAAATCTGGAATATCCATTCTGTTTTTCATATATTTCATTAATGCTTCTGGTCTATTATTTTAATTGGCAGATGTGAAGTAGCGCCTCATATTTTTAATTTCCTTTCAAATTATTCGTTAAAGATTTCTATATTTGCCCTTGTAGGATGTATGGCATTGTGAGATATGCAATCGGAAGCCTGGGCGAGGCTTTGGTAAGCATCATTTTAATTTGCACATGTTTCTCTGTTAATCTGCTTTTTACATCCACTTACGTGACTACCTTAACAGAGACCACCGTTGAGGTGTTACCACGATTATGCCAAATTAAATATGCCAGTGGTACATTGGAAGAATTACTATATGTCGACATGCCACGTGAATCGCAGAATGCCTCTGGTCAGATTGTTTTGGACTATACCAAAGCAATCCAGGAAAGTGTCTTTGAGCAGTTGCGTGTGGTACGCGAAGGACATCTAAGGATAGTTTTTAATCCTGATCTCAAGGTATTATATTTTTTTTGATTTTTTTTTGTCACTGGTGGTCCTTTAAAGTTGCTGGTATGATAAATGGCGCCTTTTTGACTAAAGCATGTTTCCTTTTATTGAAGATCGCTTCTTGGGAGTTTTGTGCAAGGCGTCACGAGGAGCTTATTCCACGTAGATCAATAATACCACAGGTATTTAGCCCTTTCACTGTATACATATTTTTATACAAGTCAGATGTCTCATTTCGATATTCTGAATTTTGGGCAAAACGGGAAAGGGTTTAATATATTTTGGAACCCTCGGTGTTCTATGCAGGTTAGTCAACTGGGCGCAGTTGTGCAAAAATACCAGAGTGCTGTTCAAAATTCGACAAATTTGTCAACTCAAGACATGCAGAATAATTGCAACTCGTAAGGAGACTGTCTCTGATGCACACAATACTTTCCATCTTCAGTGTGTTGCAAAATCATTAATGCTTTATCCACCTTGTTCCTACATGCATATTTTTGTGTTCTTCTGAAATCTATCTTATTAGCAAAGAAGCTAGCGTGTCTACTCATGTAAATACTTTTTTAACTCAATACTAGCATGAACTGTCTTGCAAAATGGGACGTAGCCACTGTGTCATCCTTCGAGTTTAGGGCCAACCAGCCAAGCTGTAAAAATAGTTAAATACTATTCATGGCCTAACCATTTAGATCCTATGGCTGTTGTGGTTGATTTGGTTAGCATATGGCCTTTGACAACCATACCATATCAGCAGGATGTAGGCCACATAGTGATGGATTGGGTTGGATTGGTTGATCATCCTTAGGGTCGGCTTGGCGGCAGTGGAGTGGCTTCAACTCATTAGCAGGTCCACTTGCAGATTGGTCTCTACAGCATTACAACTGGTGTTAGGATTGCACCCCGGTTAGAATTATTTATTACCTCTTTTGAGGTGGGGTGATATTGTGCTTAAGGCATGGTTGTCAAGTCGTTACTACTAGTATTAGGCTGCACTGAGTAGGTGCAAAAATAGTTCTCTGAGACTAAGTCTGTGTTTAGACTATCCTCAACATGACAGGTGGCATAATCGCCATGTACAAGTAGTTAATTTTAGTGTATGTTAGTGCTTTGAGGATGGGTCTAAAGTCTAAACAGAGACCTGGTCTCTAGGATAGGTTTAGTGGGCCATTTTTTCCTTTTTCATTGTTCTTTTTACTGGCTTTAGTTGGTATATGATGGATTTCACTGAATATAACTACTGTTAGATGCTGACTAGGCACCTGCCTAGTGTCCAAGTGCCCCCAAAGTGCCAGAAGACACAGTGCTGTGCGAATGGCATGAGCCTTAAATACGTGGTATTCTGGTCCACTGGTTGAGTTCAACATGTCATGGTAGTTATGTACTGTACTCTGTGGTGTAGGCAGTCCTGCTTGTAGTACACTATTGAATTACTGAATTACATGCACAAGTCACCTTTTTTGTGCGAGACCAGGATTTGAACCCTGGTTGGTAGATTCTCACTGGAAGGCATTTACCACCATGCTACAAGCACATTTGCCTCAACATCTTGAATGACTTGAAACTTTTTAGAAATCAAGCAATAAACTGGATAGAAGGTCCTTCATGGCTACATGCATACATCGTTTATTCATGTAGTAGATGGTATTTTACTTGTTTGAAATGTTCCGTGGAAATCTCATTTGTTTCTTTTCTAATTGGATCTCAGGCAAATTATGCCTGATAAGAAAGTTACAACTATTGAGGAGCACCTACAGTGGTCTAGTTAGAAGGCAAGTTATTGTCACAGTATAAGCAGCATTATCCAAAGACTACAGCGTAATATGTAGAATCAACATATTTTGTGTTACATATTCTGCATGTTTGACATGTACGTTGACCCATATGGGTGAAATATTTATTAAAATATATAGTTGAGGCTACAGAATGAGATGTTTTTAAAAACATGCTTCTTTCAATGCCACTGTAGTATGCGAAGGAGTTGCACGAAACAAAGTGGTGGGTATAACCACTGATTTTTTGAAGGTTTGCTACCCAGTGTTTTTGGTTTAGTTTAGCTCACTGACTATCCTCCAAAAAGGTTAAGCTTCCAGGGGAACACTGACCATTTATTCACATCCAGGCTCATCTCAGGCCTACGATGTGGATGGTTAGATGATGTTGGGATGTGTGTACAGAAAAACTATAAGTGTAAAGCATTCTGGATCTATGGGTGTATAGTTATTCTTACTGTTCTAGCACCGTGTGTTCTTTTACTATGATAGGGGAGATGGATAATTTATGTATACTTAAGAGTTTCCATAAAAGGGGACCTTAATCCATTTCTGAGATCTTTTTGAAGTACAAGAATATAGTATGCATGATTTGCTCATCTGGTACATCTGATGGAACACATCTAATTAAACACGATCCAATTATTACATTGGGGATGTGACTGTATCATGGTGAATTTGGAACAGCGGAATAATTACATTAAAATGCTGTTGCTACAGAAGATAGTGTTTTAGTGGTAGGTATCTTGGAGATTCGGATTACACACATGGTGCTGGATATTACGGTGGCATGCCCAAGCAGATGTTTCACATGTGATCTGTTTATCATCTGATTATTTACCTCTGTAGAGAAGTCACCATCTGTTGACAAAAAAAAACAATTGTTGTTTTTTAAGTTACGACCAAATAGTTGGGAGTCCTTAAAGAAGAGGTGGTGATGGAGTGTGCTCTACAACTTTTTCTTCACTTTCAGATCTTTCAAGCGTGCACTTGAAGGATCTTTTTGCATTTGAGGATTCTTTTTTGCTTTTTTTCACTTTAGTGCTTTTGGTATGTTTGCTTCCGAACATTATTTTGCTTCTTTAATAAATTATATGTCACAGAAAAACTTATGAGGGTAGACCAATTTGTGCCTTTTAGGGCTCACTTTCCTTTTTCACTGTTGTTTATGTACCAAGTCTGTTGATTTTGTTTTTCTGTTTGATTCTTTTTTGGGATAATTGACATTTGAGTACTGCAAATTATACTTATTTTTCAATCTTTTACTATTAGGTTTGTTGCATGTGCCCGCCAATTGGCTAAAGCACTGGAGGTGCCTTTGGTAAATGATCTGGGATACACAAAACGATATGTGCGCTGCCTTCAGGTACACTTATACATGGTTCTGTTTTTATTCACCTGTTCTGTATTTCTACATCCAACAAATTTAGATTATTGTCATATGCAAAAGTTGGTATTTTTTACATAGGACTATTATCATTCTTTGTTGTGGGCCTTTGGCACCTGTTGCCATTCTCTATTTCGTTAAACTAATTTATCTGACCTATTGTTTTGTCATCCAAAACATTGATACTTCCAGATTGCTGAGGTGGTAAACTGTATGAAAGATTTGATTGATTATAGCAGGCAAAATGGGTCTGGACCAATTGGTACGCCATTCTTATCTTCTGTTTACTATGCAGTCTCATCTGATCTCATGTCATCTTGTTTAGCATCAAGTAATCTTCACATATTGTATGATCATCCACTTGTACTCCTACAGCTCCTTCATTTGTTTTCTTTTGATTGTACATTCTATTCACCATTTTTTATCAAGACAAGTTTCCAGGCCGTACAATTTTTGTTCATGCCCCCAGTCCCCCAAATTTGGTTGTTTAATTAATAAGGAAGTAACATGCTGTTATTGATCTGTCACAACTTTCAACCTGTGACTAAGATGTGTTTGAAATGAGACAGTTGATAGAGGGCTGATTTCCTGTATTTTCCTAGTTGCCTTTTCTCCAGATCTTTATTCATTTTTTTTTGTTTATTCAACCTTCAATAAAACATGTGAAATGAGCTTATTCTGAAATACCTTATAAATACCCCAAACTGGTGGCTCTCTGACTATAATATTAGGATGACTGAACTGGCTCCCTTGCTGATTTTTACTCCTAGCCAAAGAACATGGTAGTCTGTTGCTATAGTGTTAACTGTATTTTACAGCCTTATTAATGTTACCACTTGTTTTGTGCATATTTAACATCTACTACTATTAATTGTTTCAGCTAGTTTGCATAGCTTTCCTCGGAGGACTTCATCAGGAGGGGTAAACCCTCAACAGTCACAGCAGCAACAGCCTGAAGAACAGCAATCTATCCCGCAGAGTTCAAACCAGAGTGGTCAAAATGCTGCTCCCATGACTGGTGTGCAGGCTTCTGCCTCTGCAAATGCAGATGTGACATCAAATAATTCTCTCAGCTGTGCACCCTCAACGTCTGCACCTTCACCGTCCGTTGTTGGGCTCCTCCAAGGTTCAATGAACTCTAGACAAGATCATCCAATGAGCAGTGCTAATGGTCCATATACCAGTGGAAACAGTGCTGCAATTCCCAAGGTGAACTCGACAACCTCACTGCAGTCAACTCCATCTACCTCTTTTCCTTCACCAGTGCCAACAACATCCAATAACAACATGATGCCTGCCCCTCAGAACACAAACCAACTCAGCTCCCCAACCGCATCATCAAACCTACCGCCAATGCAGCCACCTGCTACTCGACCTCAGGAGCCTGATCCAAATGAGTCCCAAAGCTCGGTTCAGAGAATATTGCAAGATTTGATGATGTCACCGCAGATGAATGGTGTTGGCCAGCTTGGGAATGACATGAAAAGACCGAACGGACTTACATCTAGTGTTAACGGAGTTAATTGTTTAGTTGGTAATGCTGTTACAAATAACTCAGGAATGGGAGGAATGGGAGGAATGGGGTTTGGGGCCATGGGTGGGCTTGGTCCAAATCATGCAGCTAGTGGATTGAGAACTGCAATAGCGAACAATGCGATGGCAATTAGTGGTAGGATGGGAATGAATCACAGTGCACATGACCTATCACAGTTGGGCCAACTACAGCAGCAACAGCAACAGCAACATCAACATCAACATCAACATCAACATCAACATCAACAGCAACAGCAGCAGCAGCAGCAGCAGCAACATGACTTAGGAAACCAACTGTTGAGTGGACTTAGAGCAGCAAACAGCTTCAATAACCTTCAGTATGACTGGAAACCATCTCAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034992