Os06g0521600

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Revision as of 09:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0521600| Description = Zinc finger, SWIM-type domain containing protein| Version = NM_001064282.2 GI:297605925 GeneID:4341169| Length = 360...")
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Gene Name

Os06g0521600

Description

Zinc finger, SWIM-type domain containing protein

Version

NM_001064282.2 GI:297605925 GeneID:4341169

Length

3604 bp

Definition

Oryza sativa Japonica Group Os06g0521600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:20108203..20111806

Sequence Coding Region

20109315..20110868

Expression

GEO Profiles:Os06g0521600

Genome Context

<gbrowseImage1> name=NC_008399:20108203..20111806 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:20108203..20111806 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatggtgaatgacgcgaataagccatccttggtcaaaggaactgtgtatcccaacatgaaggtctttagattggcggttagacagtttgctatcaatgaggagtttgaactttgggtaaaggcgacagatcgtaaaaaatatgtaggagcatgcaaaggggcaagtgattgcccttggcatgtgaatgggcgtagacaggctgacgagcgaaccgtaatggtactttttttcctaatgtcattgacattttcacttctatgttattttctttattttgctctaatgccatgttttatttgttttaatttgcaggtgacaaagtttactaattatcacacgtgtacatctagcggtagaagaaagactaccacaccaaccagcgcctgggttgcttccaaggccatccatatccttaggacagactcaggtatgggccctaaagaactgcaaaaaaggttgcaagaggatcagaaatgcaaaatcaattatgatactgtggctaagggtaggagtttggctatgatccaattgcaaggtagttgggaagaaaatttccatatgttgtataggtggagggctgcagtcatggagaggtcccctggtagtgttattgagattgacactattgaggttgatgggaaggtttattttaacagattcttttgtgcacttagtccatggattactggatttctaactggatgtaggccataccttagtgtagactcaactgccctaaatggtttgtggaaaggacatttagcatctgccatagctatagatggaaacaactggatgtaccccattgcttttggtttctttgatgctgagactactgataattggacctggtttatgattcaattgctcaaggccataggaaaagtatctcctcttgcaatttgtactgatgcatgcaaaggattagagattgcagtgcaccgagttttcccttgggctggacatagagaatgttttaaccaccttacgcaaaatctaatcaagaaatatggtggatctgtcttccaagagatgtatcctgtagctagatcatatagggcacaagtgcacgaggagtgtatggatacaattaagaaagcatgcaccgatgtggctctctggcttgacacttaccataaattgatatggtacaggagtggcttcaatgctgaaattaaatgtgattatgtcactaacaatcttgcagagtgctttaacaattggatcagagatataaaggccttacctatttgtgagcttgctgacacatgtagggagatgataatgaccctgtggaataggaggagaaggattggaaataaattcacaggtacaattctacctgccattttgcaccagttgagagctaggactcgagggttaggccacttgtcagttgtgcatgctgacataaccactgctgaggtttgggacaatagtagcagccatgctaggcatgttgtgaggacacatgagcagtcttgtacatgtcaggagtggcaacacactagcaagccttgccaacatgccttggcagtgattgcctcctag</cdnaseq>

Protein Sequence

<aaseq>MMVNDANKPSLVKGTVYPNMKVFRLAVRQFAINEEFELWVKATD RKKYVGACKGASDCPWHVNGRRQADERTVMVLFFLMSLTFSLLCYFLYFALMPCFICF NLQVTKFTNYHTCTSSGRRKTTTPTSAWVASKAIHILRTDSGMGPKELQKRLQEDQKC KINYDTVAKGRSLAMIQLQGSWEENFHMLYRWRAAVMERSPGSVIEIDTIEVDGKVYF NRFFCALSPWITGFLTGCRPYLSVDSTALNGLWKGHLASAIAIDGNNWMYPIAFGFFD AETTDNWTWFMIQLLKAIGKVSPLAICTDACKGLEIAVHRVFPWAGHRECFNHLTQNL IKKYGGSVFQEMYPVARSYRAQVHEECMDTIKKACTDVALWLDTYHKLIWYRSGFNAE IKCDYVTNNLAECFNNWIRDIKALPICELADTCREMIMTLWNRRRRIGNKFTGTILPA ILHQLRARTRGLGHLSVVHADITTAEVWDNSSSHARHVVRTHEQSCTCQEWQHTSKPC QHALAVIAS</aaseq>

Gene Sequence

<dnaseqindica>939..2492#gttgactgagggagaagctgggagcggcatcggcagaggcgacagcagcgcgcctccgcatcggcttcgtcttcggcgccggcgccggcccccgcccctgccactcccctacctcgtcctcccccagtcagcgccaccgcccccatccgcctccgctgccaccgccacccccatccgccgccgccaccgcgacccccatccgccgccgcccccatccaccacggcctccatccaccgccacccccatctgccgccgcccccatccaccaccacccccatccgccgccaccgccgcccccatccaccgctacctccatccgctgccacccccatcagccgctgcccctcggtcagctcttcccgccctccactccctcctcccctccctcaatgtgtggttagggtttgactccatggatgactccacctggctacagattgttgggaggtatgcacttctctatttttttttcagtgacatgattacacgattgatttgctggaagtaaggggttagatagatctgactattgtttgcaattatttgcatctttttctctaggctcgaggaggagcctgggagtcaattagtagttgtacaatcacctgctgatgaacctgatagtggtggtagttctcctcctactcaaggagaacagccacagccagaaccacatccaccacctattgttgattgggaaaacctacagattatcgaatcgttagatgaggaaggaagggtaaacatcgtggatgatgacgagttgtatgtgcttttgggtttgagggctgaggatgaagccgccgagaatgctcaagcggcggctacaactgaacagggtaatggtaacaatggcaatggtgctgaaaatcggaatcacgatgaaaatgaggttgaggttgagcctccggtcgaggacgaggttgcgggagaaaggatgatggtgaatgacgcgaataagccatccttggtcaaaggaactgtgtatcccaacatgaaggtctttagattggcggttagacagtttgctatcaatgaggagtttgaactttgggtaaaggcgacagatcgtaaaaaatatgtaggagcatgcaaaggggcaagtgattgcccttggcatgtgaatgggcgtagacaggctgacgagcgaaccgtaatggtactttttttcctaatgtcattgacattttcacttctatgttattttctttattttgctctaatgccatgttttatttgttttaatttgcaggtgacaaagtttactaattatcacacgtgtacatctagcggtagaagaaagactaccacaccaaccagcgcctgggttgcttccaaggccatccatatccttaggacagactcaggtatgggccctaaagaactgcaaaaaaggttgcaagaggatcagaaatgcaaaatcaattatgatactgtggctaagggtaggagtttggctatgatccaattgcaaggtagttgggaagaaaatttccatatgttgtataggtggagggctgcagtcatggagaggtcccctggtagtgttattgagattgacactattgaggttgatgggaaggtttattttaacagattcttttgtgcacttagtccatggattactggatttctaactggatgtaggccataccttagtgtagactcaactgccctaaatggtttgtggaaaggacatttagcatctgccatagctatagatggaaacaactggatgtaccccattgcttttggtttctttgatgctgagactactgataattggacctggtttatgattcaattgctcaaggccataggaaaagtatctcctcttgcaatttgtactgatgcatgcaaaggattagagattgcagtgcaccgagttttcccttgggctggacatagagaatgttttaaccaccttacgcaaaatctaatcaagaaatatggtggatctgtcttccaagagatgtatcctgtagctagatcatatagggcacaagtgcacgaggagtgtatggatacaattaagaaagcatgcaccgatgtggctctctggcttgacacttaccataaattgatatggtacaggagtggcttcaatgctgaaattaaatgtgattatgtcactaacaatcttgcagagtgctttaacaattggatcagagatataaaggccttacctatttgtgagcttgctgacacatgtagggagatgataatgaccctgtggaataggaggagaaggattggaaataaattcacaggtacaattctacctgccattttgcaccagttgagagctaggactcgagggttaggccacttgtcagttgtgcatgctgacataaccactgctgaggtttgggacaatagtagcagccatgctaggcatgttgtgaggacacatgagcagtcttgtacatgtcaggagtggcaacacactagcaagccttgccaacatgccttggcagtgattgcctcctagcaaattagggatgtaaagttggagaactacattaatccctactactctgtggccctattctggaatgcatacaactcaattattgagccactccctgacaaatcacaatggcctaaggtggatttaccttttgttcttggtgcaccccttgcaaaaaggaacctaggaaggtacaggaaactaaggatcaagggttgcttggaaggtggtggtagcaagcctaaagactgccaaagagaaggcaacgattagaggaaaaagaggtgtaaaaaatgcggtgagttgggtcatggacaaactagctacaagtgcaagctcaatggtacaaagaagaagccgtaagtctaaatgtcattattttttttctattgtactacatttgtttttccttgtaaaattaaaatatatttatctcaccttgtaggaaacgaaaggcaagatggaacacaatgaggtatgggccggctcctgctcctaatgctcctgatgtggtttatgcccctgctcctgatgctcctgatgctcctgctgctcatgttgctcctgctcctataccacataccccaactaggcctactgtacaaaccattattcaagaaagcccaacagttgtgacaagacggttagtacaaccaactacaattacattaacctagatgtatttttgcttaacaacaacaatttccttgtagccggcttgcaatgttaatggaacaaggagggacaagcacacaaccggcacttgcttcacaagtgacatgtaaaaggaggttgaatattgctgaatcaagctcaaagaggacatgtacaaagaagctcacacccaagaaaatgaagcctacttgattgtgtgctatgcatgtgaggcactgttataagaggtattttgtgaaccatggtggtgtatgtgaaccatgttagtgtatgtgaaccacctttgttgttggtgcatgtgaggcactgttatttgaggtcttttgtgaaccatggtgcatgtgaaccatggtgcatgtgaaccactgttatgttgtgaccactgttatgttgtgaaccattgttatgtgaggtattttgtgaaccacatgctattcaatattatgtctacatgctgt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0521600, RefSeq:Os06g0521600