Os06g0523400

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Revision as of 09:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0523400| Description = Nucleotide-sugar transporter family protein| Version = NM_001064288.1 GI:115468307 GeneID:4341175| Length = 6089 bp|...")
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Gene Name

Os06g0523400

Description

Nucleotide-sugar transporter family protein

Version

NM_001064288.1 GI:115468307 GeneID:4341175

Length

6089 bp

Definition

Oryza sativa Japonica Group Os06g0523400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:20215636..20221724

Sequence Coding Region

20216026..20216130,20216271..20216348,20217547..20217733,20217919..20218088,20219051..20219129
,20219829..20220043,20220169..20220251,20221283..20221334

Expression

GEO Profiles:Os06g0523400

Genome Context

<gbrowseImage1> name=NC_008399:20215636..20221724 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:20215636..20221724 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagtggtacctggtggccgcgctcctcaccgtcctcaccagctcgcagggtatcttgactaccctctcgcagagcaatggcaaatataagtacgactacgcaaccattccatttctcgcagaactcttcaagctgtctttctcaagcttctttctttggaaggaatgccagtcttcatctccaccaaggatgacaaaagagtggaggagtatacgactataccttgttccttcagtcatatatctcatccacaacaatgtgcagtttgccaccttgacctatgttgatccatctacctatcagataatgggaaaccttaaaattgtcacaactggaattctgtttaggcttgtcctaaaaaggaagttgtcaaatctacaatggatggcagtagttttactggctgttggaactactacaagtcaggttaaaggatgtggcgatgctccatgtgattctcttttttcagccccatttcagggttacatgcttgggatactttctgcttgcctttctgcactagctggtgtctacactgaatatttgatgaagaagaataatgatagtctgtactggcaaaatgtacaattatatacgtttggtgttatattcaacatgggatggcttatctatggtgacttcaaagctggatttgagaggggtccatggtggcagcgtctttttaatggctattctatcacaacgtggatggttgtgttcaatttagggtctactggccttctggtctcatggctgatgaagtattctgacaatatagtcaaggtgtactcaacttcaatggccatgcttttaacaatggtattgtctgtatatcttttcaatgtgagagcaacacttcagcttttcctaggcattgtcatctgcataatttccctgcagatgtattttatgcctgtgaacatgcttgttgaattgccacaagcattgccagttacttcaaagtag</cdnaseq>

Protein Sequence

<aaseq>MQWYLVAALLTVLTSSQGILTTLSQSNGKYKYDYATIPFLAELF KLSFSSFFLWKECQSSSPPRMTKEWRSIRLYLVPSVIYLIHNNVQFATLTYVDPSTYQ IMGNLKIVTTGILFRLVLKRKLSNLQWMAVVLLAVGTTTSQVKGCGDAPCDSLFSAPF QGYMLGILSACLSALAGVYTEYLMKKNNDSLYWQNVQLYTFGVIFNMGWLIYGDFKAG FERGPWWQRLFNGYSITTWMVVFNLGSTGLLVSWLMKYSDNIVKVYSTSMAMLLTMVL SVYLFNVRATLQLFLGIVICIISLQMYFMPVNMLVELPQALPVTSK</aaseq>

Gene Sequence

<dnaseqindica>5595..5699#5377..5454#3992..4178#3637..3806#2596..2674#1682..1896#1474..1556#391..442#tccccggcccggtcacgccgccaccgccgtcgccaccgctccccgccggccgttgtccgtctctctcgccgcaacctcgaccacgacctggggctggggcaggctccgcctcgccgccgcccggcgactgccagtcaggctcgcctcgagccctttccgagcccaacccgtagctataggccctaaagtggagttaggtccaacgccacattgcctcgccgacgcaagtagcccaccgcaccactgtctcgtcgactccgctgctctacaacgaccactccccgaacccggattgagagcgagcgagagcgcgcgcgcggggagaagccgagggtgaagtcgtcgtcgtcggcggcggcggcggcggaggaggaggaggaggagacgacgatgcagtggtacctggtggccgcgctcctcaccgtcctcaccagctcgcaggcaagccccggccccccctccctaaaccctccacctcatcttccccttcctcttcccgcgacgcgctgtccagatctacgcgctttgggtttttcgtcgacgcgtggagcagaggcctctgtaggaggcggcggcggtggcggcggttgctgctgcttcgatctgcggcgatgtgcgtaatttgatccattggagttgtggtttggagaaatgcagttcagataaggtgtggcctgggggtccgtgcctgcttcagggagcagctacctgagcaggcgtgttctgaaggtgtccattttattcccttgttggggatgggtttttggtggaattgtgaagttctctaggtgtttgcaagttgatgtaaatggtcacggggacgcaccatgtagaacaaacttataattccattgcgggaatgtgtcattccgttcggttagtatggcatgaagatggcccttcatttttcatactagacaactatccagaccattatggtcattttgcacatttcctggtgttccaaacagaattctacttacagttaattccagaaatggaaaaataataggagtaaaatatccttatgagaagaaagagaagaagaaatcaagatattaaatgcaaaagaaatcaagaacatgaccaatcttcagcgcgcaaccaagggctatgacctgacgaagaatctcgggctagaaatagtgcggcattagggaggttaagatggtgagtgacttctctggagcttgcccagcagttatgagatagtagtgtactccagaagggtacaccagaatagcatggtactgaaatgtttgattccaagcgccaaaccagaatgacccacagaacaaaactgacaacttgatgtagaaaacccaatcattggaggttaacgagcagacttcatggtcatagttaaattaacttaagttattctagaaattgtccattacttgtttttttccttcaattgcatggtttattttctaagctctagagtttttaattctcttgcatatgtgcagggtatcttgactaccctctcgcagagcaatggcaaatataagtacgactacgcaaccattccatttctcgcagaactcttcaaggtacatgaagtttatgctattgtttacagtgatatctgtatatcctagttactgaaggcactcaagagataacattcatctatttatttattctgcatgctgatgttaacctgttcttgatacagctgtctttctcaagcttctttctttggaaggaatgccagtcttcatctccaccaaggatgacaaaagagtggaggagtatacgactataccttgttccttcagtcatatatctcatccacaacaatgtgcagtttgccaccttgacctatgttgatccatctacctatcagataatgggaaaccttaaaattgtcacaactggaattctgtttaggtgactcttttgtaccttaatgtcaaatatttccactgttattcttcctgatattattggcatgatagaatatatattaaatatccttgtgtactctgcttcatttgataaaattcaaacttcaagtgcattctgaacttgaaagcagtcaaagacttatccaaaataacatacacgatagaaatttttagcttgtcttcaaattttaagcagcttacccataatgccaattgtcattagcatatattatctgtatgtttgatgattcttgataatttaaattttatattttcaactattctggtggttcactatatgacactcttttgttgtttaaggtttgccctgacccttgaaattcagttgacttaatgtccgttttttcaggtcataaaataatttaatttgctacactgcaatcaattcactgaaatagctatacattttttcattttaatgtttcttgctccacaaagtaagaatatcaactagtaagaattgtgcaccacacaagtgttgcagagccattgaatttgtgacagctgacaattgagaaatcaatatcttatgtttgtgtttcaaaacttatgcattgcaactagatattgacacttcatttagttgaccagccaacatgctgaccaaattaatttctggtgcttgattgattaagtctcattttctctctaaactgtataggcttgtcctaaaaaggaagttgtcaaatctacaatggatggcagtagttttactggctgttggaactactacaagtcaggtttgtgaacattttgaaactttattcccttttgttttagcatatactattgggttatgcttatgttatctcacaaaactcctcatacaaacatgttacaaaaaatggactggtggcctgactggaaaaaaaaacctagtctggtcggtttaaataaaataatgattgagagaaaatccaggcagattgacttttgctactgttgaggcttctggggttcaaacctgggatcttgagtcccccgaatgcatggattgggcctctaaccaactgagctgagctacacatttgatttatgggagatcttgtagatatttaaaaaatgtttttattatgtgtagccttaaaatctattgaaaatatcatttccaaactggccagttcaccggttaactggtcagatcagcaaacaatgaaccagcaaatgaccagttcaaccatacatgttttttcatactacgataccacggatgactgcttcatcctttatggggcactcgtcttagtggcatgtgtgtgtggatccaccttgtaagtgtgataatcattgatccgttctgatagtagaaaacatatttaagtctgcctaacttatatgtttttaacttgatggccgcaaactttgtgaacatgtaactgagtaatatgtgactgtatttttttcttctattctttggtgcggtatatttacacctgatatacatgctccaagattggatttttcataatgtttcacacttactcaggtttccaatagatatacatataaaaatcagatttctgatgttcattagatgatcgcaagctatttaatgtgtaggaaagatccactgatattggacacttctccttttttcatgtcaaaatacactgcaataccattaatttttctttgaatattttactgtaactatgttaagtcactaaatttgtttttcttactacccttctgttgcttacaggttaaaggatgtggcgatgctccatgtgattctcttttttcagccccatttcagggttacatgcttgggatactttctgcttgcctttctgcactagctggtgtctacactgaatatttgatgaagaagaataatgatagtctgtactggcaaaatgtacaattatatacgtaggtatctatatctaactctggtccattgtcacagacctgcacaggccaaataccttccattttcagtgtgcatattttctgactatacatttgattgcatcaaaacaattttaaggctacctggtgtgctgtcacaccaggtgtggcaaacactatttcacacttatcttatgcactgtcaggtttggtgttatattcaacatgggatggcttatctatggtgacttcaaagctggatttgagaggggtccatggtggcagcgtctttttaatggctattctatcacaacgtggatggttgtgttcaatttagggtctactggccttctggtctcatggctgatgaagtattctgacaatatagtcaaggtgacagtttattcttaatcttagctgtgcagaaaaaaatcatctcactagcgtgtttcctttatactgtgaaagacgtaaatgaagataaagttcacaatataaaaataagttatccacagatccaaaatccatggacgatagcatggggtcagtcatccacctacatatacacatgcaaaagaatcaagatatgcctgattctagtgcctgcagtgcagattgatactgtgtatttgatttcatgccaattacgtatttgctatttgtcaaagaaaactagttgaccagactcttcaatctttagagagcatgctttatttgtactgtacatttgtctttaagaaaacatggaaaaacaagtatatttggtgtcctaaagcaggataatgtggttattcatgtgtgctgaacataagattttcaccatactgaactagttaattttttttgtgagtttgtttcttctcttttctttccttggttgagctagctgctattcattcccaatgcctttctactggccactccttgataactccattttcctgtccaatcaagtgacccatggagcggcagttcaaactttcgcctatagacattattattttttgtcagattcattgaaattaatagaccttttttcagtggtacttttttttttaacaaaacgatgagcgccgttttcattgaatatagaaggggtaaactgtacacaaaggaactgtaaaagtaaggggccttaggccctagctaactatactgtaagccagtctccgagtctttttgctcctgccaagacccaacccaagttttagcctcctccttgatttttgccatcaaactggccgtcgagagctctttttgttggaaggttctccggttcctctcgttccaaatctcccaggtcactagcagcgttaaggtgcatagtgcctttttgggtactccttttgtgtttgcgatggcctcccaccactctagcactgtcaaaatatgttgccgctgggtggggtttagctgggcgcaagcggtgcagtctgctagtgccgcccagatcctttttcagtggtacttgtattggggtttagcaaaatgttaatgccatcacaaatctgtagacagtaagaaggatatgccttttttatcttatacaattgaagttgaaggattgtcttatgaacctctatttgaacaggtgtactcaacttcaatggccatgcttttaacaatggtattgtctgtatatcttttcaatgtgagagcaacacttcaggtacctctttttttttttttttttggttattggagccctttcatccgtttcagtttattcaattttttttacatgttggatatgaaaccatgtagattactgttcatacttacacatgctctatcccctcccttttacagcttttcctaggcattgtcatctgcataatttccctgcagatgtattttatgcctgtgaacatgcttgttgaattgccacaagcattgccagttacttcaaagtaggtacatgccagtgatgccactgttgtttaacctgttgatcagtgtgtacggtcttctgatttaagcagaaaggttagttgattatttatagctcagcttttgtgagtaatcccatggaaatcggaggctgcaatctccacagcatatgtgtacagtgtcatgtttcagataacgtgaaagaagagtggagcaaacatgggtttactgctacactttgccaattttttggcaaaaaggtgaaagcatgccttggaaaaggaaatccagaatccctatacattctttagttagtgcttaatggtttattcaccttgtatctaaattttctgacattcagtggatgcaaaactggtgagtgatcatgaaatagtaaatctttgcagaaaattt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0523400, RefSeq:Os06g0523400