Os09g0135100

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Revision as of 07:17, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0135100| Description = Conserved hypothetical protein| Version = NM_001069171.2 GI:297609079 GeneID:4346466| Length = 5963 bp| Definition ...")
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Gene Name

Os09g0135100

Description

Conserved hypothetical protein

Version

NM_001069171.2 GI:297609079 GeneID:4346466

Length

5963 bp

Definition

Oryza sativa Japonica Group Os09g0135100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:2610158..2616120

Sequence Coding Region

2610158..2610599,2610951..2611390,2614529..2614612,2615567..2615619,2615759..2615815
,2615982..2616120

Expression

GEO Profiles:Os09g0135100

Genome Context

<gbrowseImage1> name=NC_008402:2610158..2616120 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:2610158..2616120 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagctatggaaggtcggcttgtggacatgatccagtcgttggtgaagaaagtggaggaggtgaacgtaatgggatccaagctggagataattgataagaaattggagcagtatggggagcaattggggaaagtgcaggcgaaggtggatctatccatggattcccttgggcaagtgcagatggagcaagctttcgtgaccaaggcactcaaggaaggaaacccacacgctgcgccaacctcgactcgccccggcaaggctccgattctgcaaactccatcgacggcttctacgtcatcgacaccaccaactccaccaccgcttcctaatttgaatgggtatgcctctgttcagcccattcactctgctgcgcgtgatcatgctgaagtagaacacaaacgaaattggacccctaaaatggatttcccgaagtttgatggattgaaagatgaattgcactattcagttgctgctcagttgcctgaaaacgttcatcaagctttccaggttgctttaatctttgagagtgcacaccgtatgaaaaagggagttcataagaaggaagggtatctgactaagggaatagatacaccagcaaaagtaccaggagacatttggaaggcgcagcagttgaaggagtatcacaaaactcatggtttatgctttaagtgtggagacaaatatgcacctaggcatgtttgtgctaagcaagagggtccacagttgaaggcaatggaagtggagcaaaattctgaaatgttgactgatgaaatgttagatgtggtggcctgtttggagactcaaccagagaatatgttactgtctattcaagccatttctggttctgtggctcctaagaccattcagttaagggcattgctagatgttcagtcattatctccttctgccatattggatcgtcgcatggttaaaagaggcaatgcggctgtcgtccaagttaagggaattggtggatttgttttcggaaacgagaggtccgagtccaaggaagacagttacgtcgagagattccttgactgcataagcaacggtaccatacctgacgacagcaggcctgttctcctcaacgttctaaaagaagaccatgaagatgctgagcttgtgagaggtgctctagaaacctttgtgagtgcagtgactcctattgaaacctcaaaaaaccgaggttcagcctgcatcagtgaactctga</cdnaseq>

Protein Sequence

<aaseq>MEAMEGRLVDMIQSLVKKVEEVNVMGSKLEIIDKKLEQYGEQLG KVQAKVDLSMDSLGQVQMEQAFVTKALKEGNPHAAPTSTRPGKAPILQTPSTASTSST PPTPPPLPNLNGYASVQPIHSAARDHAEVEHKRNWTPKMDFPKFDGLKDELHYSVAAQ LPENVHQAFQVALIFESAHRMKKGVHKKEGYLTKGIDTPAKVPGDIWKAQQLKEYHKT HGLCFKCGDKYAPRHVCAKQEGPQLKAMEVEQNSEMLTDEMLDVVACLETQPENMLLS IQAISGSVAPKTIQLRALLDVQSLSPSAILDRRMVKRGNAAVVQVKGIGGFVFGNERS ESKEDSYVERFLDCISNGTIPDDSRPVLLNVLKEDHEDAELVRGALETFVSAVTPIET SKNRGSACISEL</aaseq>

Gene Sequence

<dnaseqindica>1..442#794..1233#4372..4455#5410..5462#5602..5658#5825..5963#atggaagctatggaaggtcggcttgtggacatgatccagtcgttggtgaagaaagtggaggaggtgaacgtaatgggatccaagctggagataattgataagaaattggagcagtatggggagcaattggggaaagtgcaggcgaaggtggatctatccatggattcccttgggcaagtgcagatggagcaagctttcgtgaccaaggcactcaaggaaggaaacccacacgctgcgccaacctcgactcgccccggcaaggctccgattctgcaaactccatcgacggcttctacgtcatcgacaccaccaactccaccaccgcttcctaatttgaatgggtatgcctctgttcagcccattcactctgctgcgcgtgatcatgctgaagtagaacacaaacgaaattggacccctaaaatggatttcccgaagtttgatggtactgatgttagagtttgggtggataattgtgacacttatttcaaattatagcaaattgtggagggtttcaaagtgttggcagcatccctgaacttggttggtgatgcggctcattggtaccaagcttggaagcaggaggtgggaagacactcttgggaacagtttcatgaagcagtgctgggggaatttgaggtcaatattgctaaagacaaaatggatgaattactgttattgtcttaaactggttcggttactgaatatcgctccaagtttgtccaattggtgtatcatctgtgtttatatgatcctaccctcagtaatctctttctgttgtctcaatttctcaaaggattgaaagatgaattgcactattcagttgctgctcagttgcctgaaaacgttcatcaagctttccaggttgctttaatctttgagagtgcacaccgtatgaaaaagggagttcataagaaggaagggtatctgactaagggaatagatacaccagcaaaagtaccaggagacatttggaaggcgcagcagttgaaggagtatcacaaaactcatggtttatgctttaagtgtggagacaaatatgcacctaggcatgtttgtgctaagcaagagggtccacagttgaaggcaatggaagtggagcaaaattctgaaatgttgactgatgaaatgttagatgtggtggcctgtttggagactcaaccagagaatatgttactgtctattcaagccatttctggttctgtggctcctaagaccattcagttaagggcattggtaaaagatcaggtggtactgattttagttgattctggaagctcacatagtttcattaatgaagctttatgtcagaagttgcaactgtcaacagtacctcatccttcttatgatgttaaagtagctaatggagctctcttgacttgtgcttctcatgtaccacactttaggtggctattgcagggacagacatttcagtttcctgtcaaagtactagctctgggaggttatgatatggtattgggaatggattggttggaacaacatagtcccatccaatgtgattggaatttgaagactatttctttcaatcatcagggttcttgggttactttacaagggattcaggccagtgctatgcattctttgactgcagcaactcctgatcagattatgaattggtttcagggtaatgatatttgggctatggctgttgttcaacagattactcctcccttgaactctgttataccatctacagtacaagccttgttggacaaatatcaatttgtattctctgcccctgactctttacctcctcatagagctgtggatcatgccttgccattactgcctggtgcagttccagtcaattgtcggccttacaggtattctcctgctcaaaaagatgagattgaaaaacaagtttgtgaaatgttggaggctggtctaatcactcatagctgtagtccttttgcttcacctgtcctattagttaagaagaaggataacacttggaggttttgtgtggattatcgtcgtttgaatactttaactgttaagaacaaatttcctcttccaattgtggatgagttgcttgatgaattaactggggctcaatacttttcgaagttagatttgaggagtggatatcatcaaatcagaatgttgcctgaggatgagtacaaaacagctttcaaaacacaccatggtcattttcaatctagagtaatgcctttcgggcttacaaatgcaccagctacatttcagtatttgatgaattctatatttgctccatttatgaggaagtttgtcctggttttcatggatgatatcctggtatatagtcactcttgggctgagcatttgtcccatttggagctggtctttcagacattacagaatcatcagttatttgctaaactctctaaatgctcctttgctacacccactttggaatatttgggacatactatatctaaagatggtgtggctactgatcctgcgaaaacagcatgtatgcaacaatggcctgttcctgctaatatcactgaactcagggggtttcttggtctcacaggatactatagaaaatttgttcaccattatgggattattgcaaaacctctgaccaaactgttacagaagaatgtgaagtttgtttggactcctgaagctgattctgcttttcacgccttgaagcaggctatgtgttctaccctagtgttagcactgcctgatttctctaagccctttgctctggaaactgacgcttgtgacattggaataggagctgtgctgcttcaagatggtcaccccattgccttttatagtaaagctataggcacacaaaacagtaagctgtctatctatgaaaaggagtttttggccattatgatggcagtggataaatgaagatcgtacttattaagaggccctttcactattaaaactgaccatcaatctctttgccacttaactgatcagtccttggacactgatttacagagaaaggctatgaccaagctaattggcctgcaatatcatttccagtacaaaaagggggttgagaataaagtagctgatgcattgcctcgagtcaaacatattcctgaatgccaggctatttttggtgctcatcctttatggattcaagaggtgctcaattcttatgctgttgatacttaggctcagcaattgctcactgaactggctattacaggttccaatactcaaggttttgagcttgtccatagtttgatcaggaagaaaggcaaaatctgggtgggagccaattctgccttgcaaactaagttgataattgcttttcataattcagctattgggggacattctggaggtcaagccacttatcaacgactgaagaaattgtttatgtgggctggtctgaaacagcaggtggaggaatttgttcagcagtgtgctgtgtgtcagcaagctaaacacgaacactgcaaatatcctgggttgttgcagccactccctatacctgaaggtgcttggcaagaagtgtgtatggattttattaagggattacctctgtcccgaggatttgatgtcattttggtggtggtggataggtttactaaatatgctcatttcatccctttgaagcatcctttcactgccttacaagtggctgaagttttcctcaataatgttactaagttgtatgggttacctaagattattgtttctgatcgagacaaggtgtttaccagtgcattttggcaggctttgttcaagcgttttgaagttcatttgcatctaagctcagcttaccatcctcagtccgatggacaaacggaaagggtcaaccaatgtttggagatgtatttgaggtgtgctgtttctaatactccctctaagtggtgttattggttgccattagctcagtattggtacaacactacattccatactgctattcagtgttctccacataaggcattgtatggtgtggatcctcatcatggcattttaccctcctttgctttggaagatgttgacacctctacttcgtcctctgaggctgataacttgctgaaagatcgcactttctatgctagtttacttcgtcaccatttgactcgagctcagcatcgtatgaaacaggcagctaatgctaatcgcacgttgcgttcttttcaagttggtgacatggtttacttgaagctccagccttatgcccagcattcagttgtttctcgcccctgccccaaactggcaatgaagtattttggtccattctccattgtcagcaaaattggctcagtagcttacaagctacagttgcctgaagctagccgtatccatccggtattccatgtctctcaattgaagcaagtgatccctaataatgcaccagttttttctaccctccctatgtctttggagctagatgttcagtcattatctccttctgccatattggatcgtcgcatggttaaaagaggcaatgcggctgtcgtccaagttaaggtgcgctggggttctttgcctgaagatttttccacttgggaagactatgatgtcttgtgtgttcgttttccggaggttaaatcttggggacaagattcctctcatgggggcggcactgtcatagctgcagccatgacagagtcgaagtctaaagcagaggagaagaagaaaggcaaagcagagtaaagcgtatagacgagttacgtattcgatgttagaaaacatgtaattggattgggagactgaattgtgggccttcggccagctgtaaggaaggggacatatatataaccccacggcactgtatcggaatcgacaatgaagaaatgaaaaagaaaattcgagaacaacttcttcttctccacgcatcttctccccatttctagaaacttgttcttcctgaactccggtgatcactggcggcgatctcgacggagttaggtcgtaacagctctctcgtccggagagccgccgcgtcgccgtgtcggcgaagtgggccgcggggtgatccgactaaagcgtgctcctcgctgttgctaggatttgcaggtgggcgggatccaatggacctgcggggtttcgctgctgctgctgctccatcaacctgctgggttttgccgggaacgccgacaaaaacatcatgtaggtgagcggtttcccgtctctcctctccactcccgacctgatgaatcgtgcgtgttgtgggatcggctctaggtttggagggagggagactgacgatgtgcgctgcgtctgtcatagggacgggttctagacacctagggcgttacagtttttttctctcagctcgcaaatgatgtatcagacagtcagagcttgttgtgtgtagcagttgctccatgtgatgttatatacttgtgatgatgttggaggcgattggtgtggtttgatgattctcgaccttatgttgtgttgatgtgtacaatttcgcagggaattggtggatttgttttcggaaacgagaggtccgagtccaaggaagacaggttggttggcattttggcattagttgttagttcacctgtacacaatcaaggaatgcttagctttaacttatgggaaaaggaaattattggtgcatgccacacttggaaagtgctcttttgaccgtgttctgtgctgcagttacgtcgagagattccttgactgcataagcaacggtaccatacctgacgacagcaggtctgccatgaccgagctgcagccgcttgtggctgagtctcattctgctcagatgtcatttggagccatgggtatttcacatactcgaagcccatgcgttcattcaccagctattggttatgtgtggttgacggttaatacatttatttgctaacttgcaaaataggcctgttctcctcaacgttctaaaagaagaccatgaagatgctgagcttgtgagaggtgctctagaaacctttgtgagtgcagtgactcctattgaaacctcaaaaaaccgaggttcagcctgcatcagtgaactctga</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0135100, RefSeq:Os09g0135100