Os06g0523800

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Revision as of 09:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0523800| Description = Similar to CRN (Crooked neck) protein| Version = NM_001187896.1 GI:297724922 GeneID:9268891| Length = 3268 bp| Defi...")
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Gene Name

Os06g0523800

Description

Similar to CRN (Crooked neck) protein

Version

NM_001187896.1 GI:297724922 GeneID:9268891

Length

3268 bp

Definition

Oryza sativa Japonica Group Os06g0523800, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:20234235..20237502

Sequence Coding Region

20234235..20234711,20234759..20235871,20236633..20236722,20236751..20236850,20236958..20237156
,20237382..20237502

Expression

GEO Profiles:Os06g0523800

Genome Context

<gbrowseImage1> name=NC_008399:20234235..20237502 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:20234235..20237502 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgctcgccatccgcgccgccgccgccgccgccggcgacatggcgccgtcatccgcctccgacccgaccctcgggttcctcaccaagcgggacacggaggtgaagctgccccgggcgacgcgcgtgaagaacaagaccccggcctcggtccagatcaccgcggagcagatcctgcgcgaggcccggagcggcaggagcccgaggtccgtccccccaagcagaagatcgccgactccgtcgagctctccgagtaccgcctccgccgccgcaaggagttcgaggacgccatccgccgcgcccggtggaacgtcggcgcgtgggtcaagtacgccaggtgggaggagcggcagggggacttcgcccgcgcgcgctccgtctacgagcgcgccctcgacgtcgcccaccgcgaccacacgctctggcgtggcgtggatatgccgagttcgagatgcggaatcggcatatgaaccgaatgaccagctctggtacaagtacatccatatggagcaagtgcttggagccgtcgccaacgcccgcaaggtgtttgagctgtggatggcatggcgtcctgacgcagctggttggaactcgtacatcaaatttgagctaagatacggtgaaattgagcgtgtgcgggccatctttgagcgttttgtggccgaacacccgcagccacatacattcatcctgtacgcaaagtttgagatgaagcgcggagaggtggagcgggcacgacgggtgtacgagcgtgcagcagacctgctggcagatgatgagcatgctgaggttttgtttgtagcctttgctgagtttgaggaaaggtgccgggaggtcgagcgcgcccgtgcagtgtacaagtatgcacttgacagggtgcccaaaggccaggctgaagagctgtacaggaagttccttgcctttgaaaaacagtttggtgaccgtgaaggaattgaggacgccattgtgggtaagaggagattccagtatgaggacgaggtgaggaaaaaccccctcaattatgattcatggtttgattacattaggcttgaggagagtgttgggaacaaggacaggatcagggaggtgtatgagagagccattgctaatatcccacctgcagaggagaagcgttactggcaacgatacatttatctatggataaattatgctttgtatgaggagcttgatgcaaaggacatggaacggaccagggaagtttacagcgagtgtctcaaattgattccacacaagaaactcactttttctaagatgtggctcatggcagcccagtttgagataaggcagaagaatcttaaggctgcacggcggattcttggaaatgctattgggatggctccaaagggcaagatattcaaaaagtacattgagattgagttgtatctgggtaattttgaacgttgtaggactctctatgagaagtatattgaatggtctccagcaaactgttatgcctggatgaagtatgccgaattagagaagagccttggtgagactgatagagctcgctcgatctatgagcttgctattgcacagtcagcccttgatacgccggaagttctgtggaaggaatacttgcagtttgaaattgataaaaatgaattccacagaacttgtgaactctacgagagattgcttgatagaacaaaggatttgaaggcctcagttggtttgggtggggaagacagtcaaagtgaggagattaaaaatgaagttagttatcaacaacagcagatagagcaggttcgaaggtgccgagctgtatttgaacgggcatttgaatacttcagaactagtgctccagagttaaaggaggaaagagcaatgctccttgaagaatggcttaataaggaggtgagctttggtcatctcggtgatgttaccttagtgcagaaaaaggcaccaaggaaagtgaagagaaagagaccagatccttcagaggatggctccactactgcgtatgaggagtacatggattatattttccctgatgaggttgcgctggcaccaaacctcaagatcctcgaagcggcctataagtggaagaagcagaagacagatgatactgatgatgactga</cdnaseq>

Protein Sequence

<aaseq>MALAIRAAAAAAGDMAPSSASDPTLGFLTKRDTEVKLPRATRVK NKTPASVQITAEQILREARSGRSPRSVPPSRRSPTPSSSPSTASAAARSSRTPSAAPG GTSARGSSTPGGRSGRGTSPARAPSTSAPSTSPTATTRSGVAWICRVRDAESAYEPND QLWYKYIHMEQVLGAVANARKVFELWMAWRPDAAGWNSYIKFELRYGEIERVRAIFER FVAEHPQPHTFILYAKFEMKRGEVERARRVYERAADLLADDEHAEVLFVAFAEFEERC REVERARAVYKYALDRVPKGQAEELYRKFLAFEKQFGDREGIEDAIVGKRRFQYEDEV RKNPLNYDSWFDYIRLEESVGNKDRIREVYERAIANIPPAEEKRYWQRYIYLWINYAL YEELDAKDMERTREVYSECLKLIPHKKLTFSKMWLMAAQFEIRQKNLKAARRILGNAI GMAPKGKIFKKYIEIELYLGNFERCRTLYEKYIEWSPANCYAWMKYAELEKSLGETDR ARSIYELAIAQSALDTPEVLWKEYLQFEIDKNEFHRTCELYERLLDRTKDLKASVGLG GEDSQSEEIKNEVSYQQQQIEQVRRCRAVFERAFEYFRTSAPELKEERAMLLEEWLNK EVSFGHLGDVTLVQKKAPRKVKRKRPDPSEDGSTTAYEEYMDYIFPDEVALAPNLKIL EAAYKWKKQKTDDTDDD</aaseq>

Gene Sequence

<dnaseqindica>1..477#525..1637#2399..2488#2517..2616#2724..2922#3148..3268#atggcgctcgccatccgcgccgccgccgccgccgccggcgacatggcgccgtcatccgcctccgacccgaccctcgggttcctcaccaagcgggacacggaggtgaagctgccccgggcgacgcgcgtgaagaacaagaccccggcctcggtccagatcaccgcggagcagatcctgcgcgaggcccggagcggcaggagcccgaggtccgtccccccaagcagaagatcgccgactccgtcgagctctccgagtaccgcctccgccgccgcaaggagttcgaggacgccatccgccgcgcccggtggaacgtcggcgcgtgggtcaagtacgccaggtgggaggagcggcagggggacttcgcccgcgcgcgctccgtctacgagcgcgccctcgacgtcgcccaccgcgaccacacgctctggcgtggcgtggatatgccgagttcgagatgcggaatcggcatatgaaccgaatgtaatgtgtgtgatcgcgccgtctccctcctgccctgggtggaccaggaccagctctggtacaagtacatccatatggagcaagtgcttggagccgtcgccaacgcccgcaaggtgtttgagctgtggatggcatggcgtcctgacgcagctggttggaactcgtacatcaaatttgagctaagatacggtgaaattgagcgtgtgcgggccatctttgagcgttttgtggccgaacacccgcagccacatacattcatcctgtacgcaaagtttgagatgaagcgcggagaggtggagcgggcacgacgggtgtacgagcgtgcagcagacctgctggcagatgatgagcatgctgaggttttgtttgtagcctttgctgagtttgaggaaaggtgccgggaggtcgagcgcgcccgtgcagtgtacaagtatgcacttgacagggtgcccaaaggccaggctgaagagctgtacaggaagttccttgcctttgaaaaacagtttggtgaccgtgaaggaattgaggacgccattgtgggtaagaggagattccagtatgaggacgaggtgaggaaaaaccccctcaattatgattcatggtttgattacattaggcttgaggagagtgttgggaacaaggacaggatcagggaggtgtatgagagagccattgctaatatcccacctgcagaggagaagcgttactggcaacgatacatttatctatggataaattatgctttgtatgaggagcttgatgcaaaggacatggaacggaccagggaagtttacagcgagtgtctcaaattgattccacacaagaaactcactttttctaagatgtggctcatggcagcccagtttgagataaggcagaagaatcttaaggctgcacggcggattcttggaaatgctattgggatggctccaaagggcaagatattcaaaaagtacattgagattgagttgtatctgggtaattttgaacgttgtaggactctctatgagaagtatattgaatggtctccagcaaactgttatgcctggatgaagtatgccgaattagagaagagccttggtgagactgatagagctcgctcgatctatgagcttgctattgcacagtcagcccttgatacgccggaagttctgtggaaggtatgttattctttctattatcctaatatatcgtcatttttatggctttcagactaaaagtgatagatatttcctagcatggctttagcctttagttcctaaatcagttgaatttcatattctagtgatttgttgaattgacattgtctgagacaacacccgcacataaaaaaaacttgcttccttgtgctttcggaattgctgtggtacctaagcattccaacattcatattttataatgtttgaccatccatattccatagtccaacaatatatgtatttataatttaaaggtaccattatattcattgttgaaaatattttgattttcagtttatttatcaatacagaagttaatgagccatgcattgtaaacatcactagtaaatattttgattttcagtttatttatcattctaaggaaaaaagatgtccagaatacagaacattttgaaaatttgggccttttaggaagttttttaaatagttaggtcctattatgattgacagattctctcattaatttcactagaataattaattactgcagaaactgttataaaattatttatacaaaactgttgtacagcatcaatccttgttacaatatttgagaattcagacagccataaagtagtgatcttagaaaatctatagaccaccttaaaattttagtcagccaagagtaccttaaaatatgaaattccttttgtttgtttgctatgtatattcttaatcatttccttttttgtatcttacaggaatacttgcagtttgaaattgataaaaatgaattccacagaacttgtgaactctacgagagattgcttgatagaacaaaggatttgaaggtatggattagctatgctgagttttgaggcctcagttggtttgggtggggaagacagtcaaagtgaggagattaaaaatgaagttagttatcaacaacagcagatagagcaggttcgaaggtgccgaggtaaacagaatttggagaacaaatttactttgtccagttgagtacctctgttccttttgtcattcatagtgcaataaatctaacctcttctttattgcaattttcagctgtatttgaacgggcatttgaatacttcagaactagtgctccagagttaaaggaggaaagagcaatgctccttgaagaatggcttaataaggaggtgagctttggtcatctcggtgatgttaccttagtgcagaaaaaggcaccaaggaaagtgaagagaaagagaccagatccttcagaggatggctccactactgcgtatgtgccttactcaattatttcattcttctatagtttctctaacaagtttcattttactctgtgctatctgcccttaaaaggaggttaagaaatttggtataacaaaaggagacaataaatagttttgactcctaatctgttcgcatagcttgttttccatttaggctgcctgcaatttagggaacaaatgtgctgataaaacattttcctaaaccttagtaggtatgaggagtacatggattatattttccctgatgaggttgcgctggcaccaaacctcaagatcctcgaagcggcctataagtggaagaagcagaagacagatgatactgatgatgactga</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0523800, RefSeq:Os06g0523800

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