Os06g0524300

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Revision as of 09:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0524300| Description = Hypothetical protein| Version = NM_001064292.1 GI:115468315 GeneID:4341179| Length = 5745 bp| Definition = Oryza sa...")
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Gene Name

Os06g0524300

Description

Hypothetical protein

Version

NM_001064292.1 GI:115468315 GeneID:4341179

Length

5745 bp

Definition

Oryza sativa Japonica Group Os06g0524300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:20278019..20283763

Sequence Coding Region

20278278..20278410,20279488..20281450,20281650..20281710,20281798..20282021,20283276..20283330

Expression

GEO Profiles:Os06g0524300

Genome Context

<gbrowseImage1> name=NC_008399:20278019..20283763 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:20278019..20283763 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaaggggacgagggcgcggcggcggcggcgaggataaggctagtgcggtgccccaagtgcgacaagttcttgccggagctccccgcctactccgtctacgtctgcggcggctgcggcgccgctctccaagcaaagaagaagtactcagcccaaggttctgataactctgataatggacatgtgaagtaccttgaggtactagagagtgttgcggaggcgcctgaagcaatggatggtgctaccgctgatggtagatctatacccaatagaatttcagctttgcacagtagatcagtttacaaccatgaagacaatcgaatggcaagaggtccaagtacttcaacaggtgaagctactattagaaacgatggtagggaggcaaagtacatgcgcatccgtaatgtggaaaatgctgacatgatgaaatcagtaagaggaagaggtatatctgacatatctccgaggtctccaatcgatggaattccacccacctcttaccaagcggaaagccttgtcaactaccaattacagtcaaaatacagattctccaacagggagcatgccaatgatagggacttggatggtccaagcagagttaggggccttgagaaagatcgtgctgagctcttgaagatgcttgatgagttgagagaccaggtgcagcaatcatgtgaggttactgatgcaccaagtagaagtgctacaactaatagacctgcagatgcctcaagttcacatggtgcgcatgatcagccaaatcagctgaggcatgatccatctgtattgcattggaatggttctcatcactcgccatccttgaatgtgcaaagtcctaatatcccacaagtccatgctccattgcctactcgacagaatcttcatggatatgcagagcccatcccgcatgcgagagcctctagctatcatgctggtgctggttacccctgcagaaatgttgataatttcttctttggacatcatgatcctgaccctttgctctcatgtcaccatgaaggcttgtaccatcagcccgtctgttcttgcttcaattgttaccaccgagagtttttgcctgtacagggaactccccttggttttactgatcaaagggcaccataccttatgaacagttatggagcatatcctgtagagggtcccctatatggtcagcagagatacacttcaagaggtactaatacttctttacagaggaatcacctgaggaccaatgtaaggaagaaaccggcacaaacttgtgagccgattgcaggtggtgcccctttcaccatatgctacaattgctatgaagtgctgcgaataccaatgaaacattctttgttgggaaaggagtataagctgatgtgtggatcatgctcacatgcaattctagtcaaccttgatggaagcaggctcaatgtttcagaacctgcgcccggtataaatttatctgctgcactgcaaaatggtattggtgatagcatgagaaacaatgggcatgctaatgctgatgagaggttgcttccacaatattgtttttctaatggaagtcatgaatctcaagaaaaagatctagaatcaaattcaagtgaatcagatagcaaacacactcctctagggactgattctgaaaatactccccagtccagggatcttccttctgaagccaatgtaatttcccatgtaccaagtttaccgcatcatgatcgttgtggattctcaccatcggaagattctggaaagggaagtagaagtacccattctgaacatgaaaaggctatcctatttactgaaagttgcaaacggaactcaattaaagatgtatgtgtagccaatgagacacagtctccagtcgatgagtttgatgatactttatatgcacaagatatgctaaatttgccacaaaatgttggccatactaggtctacaaaggcaggcgattcatttctaaccaatctcattaaaaggagcttcaaaatgaacaatggaacacgcaatggaagagcaaggatttttgttaatggctttcctatctctgaccgtgcagtcaggaaggctgagaagctagctggagaaatctgtcctggtgattactggtatgattatcgtgctgggttctggggtgttatggggcgaccctgccttggcatgatacctccttatattccagagttcaattatcctatgcccaagaactgtggtggtggaaacaccggcatatttattaatgggagagaacttcatcagaaggatttggatctacttgtgtctcgaggactgtctgattcccctggcagatcttatatagttgaaaattctgggaaagtttcagatgaagtttctggtgaagagctttatggccttggcaagcttgcaccgactgtggagaaaatgaggcgcggatttggcatgcgagtcccaagaatcatccagtga</cdnaseq>

Protein Sequence

<aaseq>MEGDEGAAAAARIRLVRCPKCDKFLPELPAYSVYVCGGCGAALQ AKKKYSAQGSDNSDNGHVKYLEVLESVAEAPEAMDGATADGRSIPNRISALHSRSVYN HEDNRMARGPSTSTGEATIRNDGREAKYMRIRNVENADMMKSVRGRGISDISPRSPID GIPPTSYQAESLVNYQLQSKYRFSNREHANDRDLDGPSRVRGLEKDRAELLKMLDELR DQVQQSCEVTDAPSRSATTNRPADASSSHGAHDQPNQLRHDPSVLHWNGSHHSPSLNV QSPNIPQVHAPLPTRQNLHGYAEPIPHARASSYHAGAGYPCRNVDNFFFGHHDPDPLL SCHHEGLYHQPVCSCFNCYHREFLPVQGTPLGFTDQRAPYLMNSYGAYPVEGPLYGQQ RYTSRGTNTSLQRNHLRTNVRKKPAQTCEPIAGGAPFTICYNCYEVLRIPMKHSLLGK EYKLMCGSCSHAILVNLDGSRLNVSEPAPGINLSAALQNGIGDSMRNNGHANADERLL PQYCFSNGSHESQEKDLESNSSESDSKHTPLGTDSENTPQSRDLPSEANVISHVPSLP HHDRCGFSPSEDSGKGSRSTHSEHEKAILFTESCKRNSIKDVCVANETQSPVDEFDDT LYAQDMLNLPQNVGHTRSTKAGDSFLTNLIKRSFKMNNGTRNGRARIFVNGFPISDRA VRKAEKLAGEICPGDYWYDYRAGFWGVMGRPCLGMIPPYIPEFNYPMPKNCGGGNTGI FINGRELHQKDLDLLVSRGLSDSPGRSYIVENSGKVSDEVSGEELYGLGKLAPTVEKM RRGFGMRVPRIIQ</aaseq>

Gene Sequence

<dnaseqindica>260..392#1470..3432#3632..3692#3780..4003#5258..5312#gttttcttctcctcgacccgccaaacagcagcccgctcttttgatcttttcctccctctcttcttctccctccgaaccacgagtcgccgccaatggcctcctgacaaggcctcgtctcggttctctgctcgtggttgggggcttcttggcgttcttgattttttggtttgggtgccttggtgctcgttcttgaggcgttcgttttcccttggtttgatgcggcggcggtggtgagggtgggagcagccgcaggtcgggaatggaaggggacgagggcgcggcggcggcggcgaggataaggctagtgcggtgccccaagtgcgacaagttcttgccggagctccccgcctactccgtctacgtctgcggcggctgcggcgccgctctccaaggtgcgccgcccttctcttcattgcctcgccgtgtggttccctttcgcagccaattggttgaattttggggccttttttttttctgtttgatcgtcgattgcattcgtagtatagtttgcatgatttttttttcttctcgttttttctgttcattctcttgcgacccattctgcaaagaatccgggttaattagttagttagttaattaattgattggttgattgattgatttcgtgtgcttgctgaactgtgatggatttgggaattgtcgggattattggtgcatcaaagttcgcacatggactttgtctttggtgacactgacacttgcggctgcggaaaatttttgatttgctcaactagtcgtcatgtttgcagcaaattttaggaagactttgtttaatgccgacaaatattgtcagctgttttatgctttcaagaaagttctgtactttgagggtttaatctgaattctcaacttgccctctttgaaacgaacttttttttatcaatttcaacctagtgccttattacaatgggcagatagtgtttactcaattcttttggaaaaatgtaaatttctacactgatgtaatcttaatatttgcgaaaaaaatcttgctcactgaaacttgaaagatggctgccagtctgccaactacaccattgcagactcgttctctcttcttttgcagttacttctatgccttcctgaatagattacatggggcttgacaaacaaaacatgggttggatttgacctaaatatcttaagattttgggtgatggttgagtagtttttatataaatcctgtggattgcgattattatgggattctagttgcattttagtccccaattgtgcttgccaacgttgctttggggggtcaatcgcaatgccattggtgctggggcttggagaagtggtcttcttgtgcagcacatccttgtcatatcctagttaataataacataatttgacttgcatgagttgcatcctttaaccctcctttgttaggaatgaagtggtcaattgaatattgagatgacatcattcatcttctgaacatttttcagcaaagaagaagtactcagcccaaggttctgataactctgataatggacatgtgaagtaccttgaggtactagagagtgttgcggaggcgcctgaagcaatggatggtgctaccgctgatggtagatctatacccaatagaatttcagctttgcacagtagatcagtttacaaccatgaagacaatcgaatggcaagaggtccaagtacttcaacaggtgaagctactattagaaacgatggtagggaggcaaagtacatgcgcatccgtaatgtggaaaatgctgacatgatgaaatcagtaagaggaagaggtatatctgacatatctccgaggtctccaatcgatggaattccacccacctcttaccaagcggaaagccttgtcaactaccaattacagtcaaaatacagattctccaacagggagcatgccaatgatagggacttggatggtccaagcagagttaggggccttgagaaagatcgtgctgagctcttgaagatgcttgatgagttgagagaccaggtgcagcaatcatgtgaggttactgatgcaccaagtagaagtgctacaactaatagacctgcagatgcctcaagttcacatggtgcgcatgatcagccaaatcagctgaggcatgatccatctgtattgcattggaatggttctcatcactcgccatccttgaatgtgcaaagtcctaatatcccacaagtccatgctccattgcctactcgacagaatcttcatggatatgcagagcccatcccgcatgcgagagcctctagctatcatgctggtgctggttacccctgcagaaatgttgataatttcttctttggacatcatgatcctgaccctttgctctcatgtcaccatgaaggcttgtaccatcagcccgtctgttcttgcttcaattgttaccaccgagagtttttgcctgtacagggaactccccttggttttactgatcaaagggcaccataccttatgaacagttatggagcatatcctgtagagggtcccctatatggtcagcagagatacacttcaagaggtactaatacttctttacagaggaatcacctgaggaccaatgtaaggaagaaaccggcacaaacttgtgagccgattgcaggtggtgcccctttcaccatatgctacaattgctatgaagtgctgcgaataccaatgaaacattctttgttgggaaaggagtataagctgatgtgtggatcatgctcacatgcaattctagtcaaccttgatggaagcaggctcaatgtttcagaacctgcgcccggtataaatttatctgctgcactgcaaaatggtattggtgatagcatgagaaacaatgggcatgctaatgctgatgagaggttgcttccacaatattgtttttctaatggaagtcatgaatctcaagaaaaagatctagaatcaaattcaagtgaatcagatagcaaacacactcctctagggactgattctgaaaatactccccagtccagggatcttccttctgaagccaatgtaatttcccatgtaccaagtttaccgcatcatgatcgttgtggattctcaccatcggaagattctggaaagggaagtagaagtacccattctgaacatgaaaaggctatcctatttactgaaagttgcaaacggaactcaattaaagatgtatgtgtagccaatgagacacagtctccagtcgatgagtttgatgatactttatatgcacaagatatgctaaatttgccacaaaatgttggccatactaggtctacaaaggcaggcgattcatttctaaccaatctcattaaaaggagcttcaaaatgaacaatggaacacgcaatggaagagcaaggatttttgttaatggctttcctatctctgaccgtgcagtcaggaaggctgagaagctagctggagaaatctgtcctggtgattactggtaaaattcctcaggctgcagagtgctaaactatgtttggtttatattttgattcctgcatttcagttatgcttcagtaatcttgaaaagaaacttaaatagtcgcctacattaatataacaaaattctattgtgtactttctttcttgtattgaatatttgagtatacaaaattttgatctgatgttctgttacttaggtatgattatcgtgctgggttctggggtgttatggggcgaccctgccttggcatgatacctgtaagaacacttgtcttggatattgttcatttcttcctgtatgctatcctatcgataaaatctctaagttgttttttttccttgcagccttatattccagagttcaattatcctatgcccaagaactgtggtggtggaaacaccggcatatttattaatgggagagaacttcatcagaaggatttggatctacttgtgtctcgaggactgtctgattcccctggcagatcttatatagttgaaaattctgggaaagtttcagatgaagtttctggtgaagagctttatggccttggcaagcttgcaccgacgtaagtatctctttaaattctaatcattttaaattctgcaaaagcaaattaatctagattatttcggtagtcaaggctagctcctgaactgcagttaatatgacagatgctattgctataatcttgtttgcgatgcctcttaattcctgtggtgatacaacttaatcctggaccattttttttaacaacataggatcatataaatctatttccaaggaaacttattctacaaatccaatgacatcatggaaaatatgttaatggattgtgctcaccattagctcttttttagagtcatctatttggacacacagtgatgtatatgggttatatagattgttagattataatcataatgccatgttatgctacagctacacccatctgcccagtataatttctaaacctttcacaaaagaatacagcctaacaacagttgagttggtcagaagtaattgtgggcttgtggcactacatttttttaatttgatcaacattccctaaaatatgtccaggaatcagggtggtaaaaatagcaagatttgtaagtgttagaaggattgggaatcttgttgtgaagtaatgccctactacatttcatctttcttattttttgtggccctattctttttttcatattaatatatactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatattaatgaatctaagacatatatatccatctagattcattaacatccatatgaatgtgggaaatactagaatgacttatattgtgaaacggaggaagtacgtcattatggtgaactagtgaatagaaatgatagaaaagcattggcctcagatctataacgtgcctggtgtctagtgccaccaccagtaggcaattccaaaatcatagttatgcatagtttcagaaatccttttgcaaaaatatgtcatcaatatcagagctacattagtcgactatccttgcgactaaacaagtgttgtgaagataattcatttcatctccagttgcctttatgtactgcaaaatcctggtacacaggatactgaatctctgatactcttttcaaggattgaatttctgcattagtcttggaactacattatgttctttatttgttgaattggtgtggtttttctactctggcccacacggccataacccttttttttctgaatggtttgtgctatttgaatctgttatgtaactattctgacgattgattacaattacagtgtggagaaaatgaggcgcggatttggcatgcgagtcccaagaatcatccagtgacaaactgacgggtcaatacaatacattcacaagctctggagatgctaagggacaagccaatgccatagctcatagctgcagctcacacaagtcacaacagggtgacttgagttttccaagaatactgtttctagtttagctcgtgaatctagttatcgtcctcctttcttgttgcctgattgtgctgccccttcagatgtcatatggaggcattcttgtagttttctagtgtatttgtgatttcttttcgacctggtacaatgattttaggggggggggggggaggagggaggtagtcaattgaatttgtttggtttgcattctaacatgtattatgcaccttcgaagaatgatgttgaaatgcatgacaaaacgcatcaaaatgagctcaattagaaggtacaggaaggagttgctggggatggtttgaact</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0524300, RefSeq:Os06g0524300