Os09g0509300

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Revision as of 07:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0509300| Description = Conserved hypothetical protein| Version = NM_001070163.1 GI:115480068 GeneID:4347532| Length = 5855 bp| Definition ...")
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Gene Name

Os09g0509300

Description

Conserved hypothetical protein

Version

NM_001070163.1 GI:115480068 GeneID:4347532

Length

5855 bp

Definition

Oryza sativa Japonica Group Os09g0509300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20414123..20419977

Sequence Coding Region

20414302..20414427,20415439..20415511,20415945..20416019,20416291..20416352,20416435..20416503
,20417155..20417183,20417261..20417468,20417575..20417808,20418299..20419306

Expression

GEO Profiles:Os09g0509300

Genome Context

<gbrowseImage1> name=NC_008402:20414123..20419977 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:20414123..20419977 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagtcgtcgctgcggaagctgcggggcttcgcgctgcagcgccacgagcagcgggtggaccgccgcgggggccactccccggccgccgccgccgccgcgaacgagctcctcgccgcctcgcaggatatggcagatatgaggagctgttatgacaatctgctttctgttgcagcagcgattgcaaatagtgcatatgagttctcagaagcactgcaggaaatggggacttgtttacttaaaagagtcacaccaaacaaggacgggattaatgataaagttttgctgttgcttggaaaggcccagtttgaactgcggaagcttgtagatagttatcgtgtgcatgttcttaataccatcaccactccatcacagtcccttctcaatgaacttcaaactgtagaggaaatgaagcaccagtgtgatgaaaaaagagagttgttcgaatttctgctgaatgcacagaaagaaaagggaagatctaagaatgccaaaagtgacattggtgcgtcagagcaattgaaacaagctcaggacgattatcaagaagaagcaactctttttctattccggttaaagtcattgaagcaaggacagttcagaagtcttttcacacaagctgctcggcaccatgctgctcagctaaatttattcagaaaggggctcaaatctcttgaggctgtagagccacatgttaggcttgctgctgagcagcaacacattgaccatcagttcagtgcacttgacgaggaggattactctgtggatgaagaaaatgaggatgattacaatgacagtcatgaagatttatcctttgattatggagaaaataaggaaggcacagaagctggtcatgcttccaggagccctacagaggaacttcttgacagaagcaaagcagagtattcctcttttcctggtgaaaggcagagatctggaagtcagtcagccccactttttcctgaaaaaaaacttgaggcagcagagagaataaaagagttgcggcgttctgctacgaggaagctatatacttatgttttgcctactccaaatgatgttagagacacctctcagacagttacagcaaatcctactagtggatctcctcttggaaacaaaggtgcattctattcatctccactccagccaagtacaaatgtgggagatttgagagacaataagctaccaagtcctaccagattatctaatgcacattcagttttgaaagagagcaataccaatactacagacaccaggacaatgcttgtgctccctttgggtgatctctctttacctggttatcatgactcgaaggcttctgacaacaaaaaggtgaagagaggatccttttctggtcctattgttcccaggtcaaggtcaacagagaatattgatgttgtttctgtaccacctaggcacagctcttcacatcagccgtcaatacatgtcagagtttctcccaatacctcgccaccactgttgtcctcacctaaaatcaaggagcttcatgagcttcctcggccacctgctaatgcatcaaaacatacaacatttcccagtttagtcgcccactctgcaccgttggtgccaaattctgctcctttggcacccagaggccaggatcattttaggccgaggcaaacaccaccaagtgctccccaaactgcatcacctttaccgacaccacctgggcctatatcccgcagtttttcgataccttctaggggcatgagaacatcaggtatttcagatggtaaagagacagaagatcttcaggataaagggcctgccagaatgagcctttctagtcttccttcagcacaaacatcgttggaggatcatcggccattgtcaggagctaccgagtcagttagcaaaacatag</cdnaseq>

Protein Sequence

<aaseq>MKSSLRKLRGFALQRHEQRVDRRGGHSPAAAAAANELLAASQDM ADMRSCYDNLLSVAAAIANSAYEFSEALQEMGTCLLKRVTPNKDGINDKVLLLLGKAQ FELRKLVDSYRVHVLNTITTPSQSLLNELQTVEEMKHQCDEKRELFEFLLNAQKEKGR SKNAKSDIGASEQLKQAQDDYQEEATLFLFRLKSLKQGQFRSLFTQAARHHAAQLNLF RKGLKSLEAVEPHVRLAAEQQHIDHQFSALDEEDYSVDEENEDDYNDSHEDLSFDYGE NKEGTEAGHASRSPTEELLDRSKAEYSSFPGERQRSGSQSAPLFPEKKLEAAERIKEL RRSATRKLYTYVLPTPNDVRDTSQTVTANPTSGSPLGNKGAFYSSPLQPSTNVGDLRD NKLPSPTRLSNAHSVLKESNTNTTDTRTMLVLPLGDLSLPGYHDSKASDNKKVKRGSF SGPIVPRSRSTENIDVVSVPPRHSSSHQPSIHVRVSPNTSPPLLSSPKIKELHELPRP PANASKHTTFPSLVAHSAPLVPNSAPLAPRGQDHFRPRQTPPSAPQTASPLPTPPGPI SRSFSIPSRGMRTSGISDGKETEDLQDKGPARMSLSSLPSAQTSLEDHRPLSGATESV SKT</aaseq>

Gene Sequence

<dnaseqindica>180..305#1317..1389#1823..1897#2169..2230#2313..2381#3033..3061#3139..3346#3453..3686#4177..5184#tttccttctctctctctctctcatctctctcagtgaggagtggtggtgtagctaagctagggtttcgctcggaatcagggttcggtttcctccaccggaattggcggcgatctggagctcggcacggcggcgcgcggcgtgatccggacgctcgggtaggtgagggagggagggaggagatgaagtcgtcgctgcggaagctgcggggcttcgcgctgcagcgccacgagcagcgggtggaccgccgcgggggccactccccggccgccgccgccgccgcgaacgagctcctcgccgcctcgcaggtgagggggcacctgctccgtacctcccgttctccgtgtgggcgcgtgggtgagcgtgcgtgtgagtgagtgagacttggcgtgtggagatctctctctgcgggagcggttctccgcttctctgtgcgtgtggttggctggctcttgggagtccgcgaaatcggttcccgaatcccgattggttgtttgtttgtgcaaattgtttttgggaattttcgttgccgatggagtactatgggatgatgtgttcggatctgtgctccatgttctgtagggagattgttgaggaggcagacgtatggagtaagttccatggcgcggtgtgcttgaactgtttgtttcctgggtggacactgggaacactcgaatttcgcagtcttatctgctcacatttgccttaacgagcagagtttcatgtaatttgagagaaacattcctttgatcttctactcttgagtatggagttagcaaaaaaaaagaaagatcaaaacaatttagaagtttagttgcactaccatcgtagccgccgacataattcacggctaagctgaatgccttgtagtaatgatggccttgtcaattctagttggatctgacaaggtagtgccccattacctagtggcgattgcttcattagtgtttgatactagttgaaaaccaaaatgctgaatgagggaggttgtctgaataggtggaaacattgatgacatatgagaaagcatgtggtacatttttttttactacagtttagtcttatcaaatctaattggatatgacaagggagtcgctgctcaccattacctagtgtccttttctaattgttgaaaatcaaaatgctggaggagggtggtttttggaataggtgcaaacagtggtgacatatgagaagcatgctttttttttaaccaacagtagagcttaatccagattccaccaagtttcctctgttaaaactttcccttgttaggttcttactaaatttgttttaaactgcaatttcactttcaacaggatatggcagatatgaggagctgttatgacaatctgctttctgttgcagcagcgattgcaaatagtgcatatggtatgtttattccccaatagtacattttgtcttttgagatcagttaagtatgtgttcaatcctgtaaaaatatttttttgtgtattgttgccatttcattttacacatgccctgcaatagaactaacaactgcccattttcaaatggataaaaaacctcaatgtttcttggttaatcgagaaagcatttaagacgaatatttcatagttttaatctaaagtacagactacagagggtgcagaaacttaggtgttttatgagttgttcaccaattcttctcgtgtatagcctcagttcatttgctcttttttcatatgctagcagctttattagttcttatgctaattgtttataaggttatagcagctagaaatataggtgtcttgactcttttttgcatatcaatgatcattttatcctttcatgcatgcagagttctcagaagcactgcaggaaatggggacttgtttacttaaaagagtcacaccaaacaaggacgggattaatggtaattatgttctgttgtgattaatggttctcactcccttgcataaacacatatcttgcaaattaagctcttcatgaaaacgacaaattgagccaagggaagttgtttgtgcccattctcatctgctagttgatagtcactatctcaaattgtgaggaaaatgaataaaaataggataatgaggccatcttaatgttattgatcattccatgtaacttttgcctattatacactttgctgcttaatgcttacattgaacagtatcccccagataaagttttgctgttgcttggaaaggcccagtttgaactgcggaagcttgtagatagttatgtaagttttaagttgtttatcggtggagtcacttatttaccataatcttctactgctaatcaagtcactatatttttcccagcgtgtgcatgttcttaataccatcaccactccatcacagtcccttctcaatgaacttcaaactgtagaggtatgttctcccattctaataattttagccattatgtacaattttttgtgcatattccctcttatgctcatgctcttttctctggggcctattccttccttgttctatgtcgttttactatttccccccctgccctttttaccctgctgatcatatgtacaatacatgaactcgctaaaaacaaaagtttggctagtaaacactggtctgtggcatgaaggaactcaaatcaactctgtagtccacttcattaatttgggttacattttattataaagtgtattgctgatcattcaaatgtggttttacataaactcattgcaactccaatggatatacatgataatctgaaattgtgtgtgtgcgtgtgtgtttttttccttttgccattcagtacaatccctgtttaaagggagcattcatttacttaaaatatagtatacatattttttttgttttgtctactcctatgcagattaacacttcacagctttgttttgtcatgttcttcttgttgcatttgttcttattttttgagtatttattatgtatttgatgcttgattacctaatcgtagtgaactgttcaatagataactatgatttattccactcagaactgcaattaagcaatagtgtttttttattacaggaaatgaagcaccagtgtgatgaaaaaaggtatgctgactgtacagaatgtggcttatatttttccctgttgacacaatttttgagtttccaaatgcttctttcagagagttgttcgaatttctgctgaatgcacagaaagaaaagggaagatctaagaatgccaaaagtgacattggtgcgtcagagcaattgaaacaagctcaggacgattatcaagaagaagcaactctttttctattccggttaaagtcattgaagcaaggacagttcagaagtcttttcacacaagctgctcggcaccatgctgctcaggtgcacattctgtcatttggaaataccccacttccttttttttttctgtggcaatctgtacaaaagctaattttgtgtaaatttgtttatattttactccaaccagctaaatttattcagaaaggggctcaaatctcttgaggctgtagagccacatgttaggcttgctgctgagcagcaacacattgaccatcagttcagtgcacttgacgaggaggattactctgtggatgaagaaaatgaggatgattacaatgacagtcatgaagatttatcctttgattatggagaaaataaggaaggcacagaagctggtcatgcttccaggagccctacagaggtaacaatgtggattttaatttgagcataattaactatcctacagaaggatactctagaattttgcatggtctcttactattagcaatcatagttcaccgcgcaggtgtaaagttgcattgctttaatgagtttaatgcatgactttgtatttctcacctttttaagaaatgatgttacattttcaaaattccatagctactacaaagtacaaactgaataattatgatgacataaccagtaagaatggtatatcgttattccatctgttaggaaagaaagatctaagcagataaatggcattccatatgttcaattacaagacattgtgcttccatgtacttaatttgttaagttgaatttgtatacggctacgcatttcttttccttttttagttggcttccttttcttgtcccaaaatatacctgtttctttacaatcatgtttttcttttcatgtctttggaggccttaattttctggatttgcaggaacttcttgacagaagcaaagcagagtattcctcttttcctggtgaaaggcagagatctggaagtcagtcagccccactttttcctgaaaaaaaacttgaggcagcagagagaataaaagagttgcggcgttctgctacgaggaagctatatacttatgttttgcctactccaaatgatgttagagacacctctcagacagttacagcaaatcctactagtggatctcctcttggaaacaaaggtgcattctattcatctccactccagccaagtacaaatgtgggagatttgagagacaataagctaccaagtcctaccagattatctaatgcacattcagttttgaaagagagcaataccaatactacagacaccaggacaatgcttgtgctccctttgggtgatctctctttacctggttatcatgactcgaaggcttctgacaacaaaaaggtgaagagaggatccttttctggtcctattgttcccaggtcaaggtcaacagagaatattgatgttgtttctgtaccacctaggcacagctcttcacatcagccgtcaatacatgtcagagtttctcccaatacctcgccaccactgttgtcctcacctaaaatcaaggagcttcatgagcttcctcggccacctgctaatgcatcaaaacatacaacatttcccagtttagtcgcccactctgcaccgttggtgccaaattctgctcctttggcacccagaggccaggatcattttaggccgaggcaaacaccaccaagtgctccccaaactgcatcacctttaccgacaccacctgggcctatatcccgcagtttttcgataccttctaggggcatgagaacatcaggtatttcagatggtaaagagacagaagatcttcaggataaagggcctgccagaatgagcctttctagtcttccttcagcacaaacatcgttggaggatcatcggccattgtcaggagctaccgagtcagttagcaaaacatagggtgagtctagttttctgtaatacaacgccaattttggtagaaacttccttataagcaatttattgtttttagtccatccttagtagttcatgtaagaacatcaagtttgggttaccccttgaagattttttttttctgtgttagttcggagcttactatcatacatgagggcgaaaacatcagtgatgctgtttggactatagaagttttttcatttgcatttatttggttgccatcactactggccgcataacacaatatggatgtatatgcacacatacattaatagatgtggatacaaatgtattatggcattatttcaagtgattttagttccttttgagagttaagatgaactagaacaggtccaagtagaaggtagtttgtcaagcaccttcattttattgttgtgacatgtaatacaatggctctatatcagactaatcctttttctcaattaccttcccttggcagaatatttggtgttgaggtgaaagtttatttatcaaggggctcagctatctcgccatggaagaatattgtacatattagtatgtgaactcggccaatattgcaaattagttggtgtttcgtttgtatcccccatggttaagatgtaattgtgcaaataacgagttgtggaataaaatctccatttttctctccgatt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0509300, RefSeq:Os09g0509300