Os06g0528600

From RiceWiki
Revision as of 09:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0528600| Description = Aminopropyl transferase| Version = NM_001064308.1 GI:115468347 GeneID:4341195| Length = 5366 bp| Definition = Oryza...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0528600

Description

Aminopropyl transferase

Version

NM_001064308.1 GI:115468347 GeneID:4341195

Length

5366 bp

Definition

Oryza sativa Japonica Group Os06g0528600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:20491319..20496684

Sequence Coding Region

20492314..20492500,20492622..20492666,20493289..20493365,20493475..20493597,20493852..20493956
,20494040..20494112,20494411..20494482,20494772..20494967,20495819..20495948
,20496101..20496175,20496293..20496373

Expression

GEO Profiles:Os06g0528600

Genome Context

<gbrowseImage1> name=NC_008399:20491319..20496684 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:20491319..20496684 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagggtggaggcgcaaaagatggttctgcagcggcagcgcaaacaagggggagtggggatgatggttcccacaagccgctgccgccttgctgtctcaaggcgaaggctgcggcagcagagtctgaggcaaaatgccatgccacagtggtgtcagggtggttcacggaaccccgctcgcactctggtaaaacaagcaaagtgcagtacttcaacaatccaatgtggcctggagaagctcattctctgaaagtagagaatattctgtatcaagggaaatcaccataccaagaaatcttagtttttgagtcctcaacctatgggaatgttctggtgcttgatggtattgtgcagctgaccgaaaaggatgaatgtgcataccaggaaatggttactcaccttccactgtgctcgattccatcccccaaaagtgttttggttgtcggaggtggtgatggtggtgtgctacgagaaatagccagacatgcctcagtggagaacatcgatatatgtgaaatagaccagctagttattgatgtctgtaaagatttcttcccacaactatctgttggattcaaagatccccgtgttcaacttcatgttggtgacgctgtggatttcttgagaaatgcccctgaagggaaatatgatgctatcattgttgattcatctgacccaattgggccagctcaggagcttgtggagaagcccttttttcagacaattgctagagctctaaagcctggtggagttctatgcaatcaagctgagagtatgtggctgcacacacatctaattcaagatatgctttctatctgtcgtgaaacattcaagggagctgtgcattatgcctggacaagcgttcctacctatcctagtggtgtcattggttttttgctatgtgcgaaagaaggtccagcagtgaacttcctttctcctgtgaatccaattgagaaactggaaggagctatggaagctggaagggaaatcagattttacaattcagaggttcatcgggctgcttttgttctgccaacatttgtaaggagagaactggaatcacacaatacttgtgctgaaaaggataaatcagaaaccaagccagtcgcgaaaccaaagaagatgaaaataatgccgaatagtgccattccgactgcttcctag</cdnaseq>

Protein Sequence

<aaseq>MEGGGAKDGSAAAAQTRGSGDDGSHKPLPPCCLKAKAAAAESEA KCHATVVSGWFTEPRSHSGKTSKVQYFNNPMWPGEAHSLKVENILYQGKSPYQEILVF ESSTYGNVLVLDGIVQLTEKDECAYQEMVTHLPLCSIPSPKSVLVVGGGDGGVLREIA RHASVENIDICEIDQLVIDVCKDFFPQLSVGFKDPRVQLHVGDAVDFLRNAPEGKYDA IIVDSSDPIGPAQELVEKPFFQTIARALKPGGVLCNQAESMWLHTHLIQDMLSICRET FKGAVHYAWTSVPTYPSGVIGFLLCAKEGPAVNFLSPVNPIEKLEGAMEAGREIRFYN SEVHRAAFVLPTFVRRELESHNTCAEKDKSETKPVAKPKKMKIMPNSAIPTAS</aaseq>

Gene Sequence

<dnaseqindica>996..1182#1304..1348#1971..2047#2157..2279#2534..2638#2722..2794#3093..3164#3454..3649#4501..4630#4783..4857#4975..5055#tccctgctgctggtactgtgcgtgggccggagggcgagagtgaagcttgagccgtctcgccgcgggcgctgctgctgctgctgctgctcgcgtccgattccgacgaggttagaggcgagccccgccatgggtgcacggtgatgatgtgataagcttcgtttcttggatctttaatctacctaccaacttaccgagtttatctctccttggtcgtcggtgttcgtttgtttgtttgttttggggggattgtttttcttttttttttgttcaactttgttcttcaactttgtgctaatcgcgcccttttattgttttatacataattgtttgcagtattttgttgattggatttatgggtttgttttggtggcgaggtttttatgggggaagttggggataatctggggactctttgtaacagtgatttaatttatttaggttcggttccatgttctgggatagttatatgggttttacggatcgattacctcattgattcttctttaatcgaaacgttattattgaattttcatgtctctgatgatagactgataatatcttactttattactaatacatagaaactaaaattgcaataccatgaaaaacataatgatgaatttagcaaagatagttcttaaattatttttgtgtatgtatagggtagaaggatgatggcccctaaagcagagttgcagtgatgacattttctattcaccttaaaagccttgtgttgagatagtgaaattattaattcaacatatgaaaatcttttattgcgttgtacatcatagatgtttggctgagcatggcacttcttgtttgtttgaaagccatggttaacatgttgcagtagttaagcaatttggtacttttgagtctggggctctgggctgcttgcttataagagttgttcatggctgtagcctgaatattttgttcccttttcttcatgttgagccagaggctgggaacttcaaagctgaaaaggactaatggagggtggaggcgcaaaagatggttctgcagcggcagcgcaaacaagggggagtggggatgatggttcccacaagccgctgccgccttgctgtctcaaggcgaaggctgcggcagcagagtctgaggcaaaatgccatgccacagtggtgtcagggtggttcacggaaccccgctcgcactctggtacatcacaattgattgcatttctgggagatatgttataaacataggagtatctgtgtatttttctacagattctggtatcaaaccgagttgctaagacattgtttattcgtatgtgcaggtaaaacaagcaaagtgcagtacttcaacaatccaatgtggcctggtatttctcttgttcttttcccagtccttttccatcaagattggtcccaattcaaattcatcatgattttcctgaaacaatatttgtactgatgtatgtgaggcgtaacctgaccgattccatggatgtgtggactgaatctatttattaatgagaagtttagctggttaaattaaactctgaaatgctcctgtagttgtttctgatttagaaatgtaagcctgagttatagccaattatctctcagttaaaaaataaaaataaaaatcttggtgttgctgcacttaaatcattaccccttaggttttagatagtgtattcatatcctaaatttgaaggcggctttgatatgtgaagtgatataaatcactttgttcatcttttttgctgggtgggccaaagattggctggccaatttcatgaagattgggggaaataaaagttttaattacaatgacaagtctcaagcaaacttaagccaatgtttttgtcaggaaatttatgtttctaatacgaagcattgtctataaaagttctctcttctttacaaaagcacatgttgaattattctacctctttgagcctgtcaagaatattactgatgttttgtttttatacacaggagaagctcattctctgaaagtagagaatattctgtatcaagggaaatcaccataccaagaaatcttagtttttgaggtcattcttcacctgctaggctagctgtgtgcatactacattactttatacataaacaactaattttgttgaactattttttgtataacctgtctatttctgtatgcagtcctcaacctatgggaatgttctggtgcttgatggtattgtgcagctgaccgaaaaggatgaatgtgcataccaggaaatggttactcaccttccactgtgctcgattccatcccccaaaagtgtatgtttcttatctttgccataccatatgtttgcaaacctgaaaataatgaaagattttgcaatgcaaaatgtttgttagattattccagtactatgttgatttcctattatctaagaaatttcttattggattgaagttattaaattaactggagaatgttgtgcattttccatggtgggaacttccttgtatgatatatggggtggtcctgctccatacattctgatgtatactcggctactttgatgcaggttttggttgtcggaggtggtgatggtggtgtgctacgagaaatagccagacatgcctcagtggagaacatcgatatatgtgaaatagaccagctagttattgatgtaagaagcatcactttatgctttagagtagaattgtcaaattattgttattttaatgattattatgctctcaacctatgcaggtctgtaaagatttcttcccacaactatctgttggattcaaagatccccgtgttcaacttcatgttggtgacggtatgtttagaagttcgtgccttggtggtattttctattatcgtagtattccataggatatgctacttatatttattagctgctcataccttttcatcatctttgcttcctttgggactatccatgtggcctagttgtacgtcacagctgtgaggttgagacctagtttcaagactccactcttttaaatagatgatttatcttgcgtgttcttaatcttttttgcatgcatatatggtggctttggattttaaaattgcctttatatcttcataatagacctgcttttattttgcagctgtggatttcttgagaaatgcccctgaagggaaatatgatgctatcattgttgattcatctgacccaattggtgagatcttgctattactaaatcaccatatgtgtgtatcatgcttctgctttatcctcttataatgatatattccagaaaggttgcttctttatcgagttcctttcatgctgttcaatggttcacgacacaattattattttccttattaattgatatttgttcccctcttatttggatttaggatattaattttaattgtttaccttttctgtcttggaattgtctaggtttcagttttgtgctccttttgtttttgtacctcatgaggatccttctcacattatagggccagctcaggagcttgtggagaagcccttttttcagacaattgctagagctctaaagcctggtggagttctatgcaatcaagctgagagtatgtggctgcacacacatctaattcaagatatgctttctatctgtcgtgaaacattcaagggagctgtgcattatgcctggacaagcgttcctacctatcctaggtccgttgctttcccttttctgttcatagtttccatgtacctcattgttatcgtatacatatatgtcttagccctcaataatttatgcactttctgctaaagactcaaacatgaaagagataggaattaggaagtttggccaacagggttagagcattcatacctaaatgagttgttgtttttcgcgaacgcgcaaaaggattgcacgtcaatatattagaaggaaatacctaaatgagttgtaattgggatctaaaatgttactagtagaatttattttttctcatatttggttaacttgcttccaagatagtaagtgccataataatgtaggaaaaatatcttagaaatccgagcatttatctggagtttgaatccataacatactcaaataagcagaacctgcaaaaatcttttactcacaatgttgaaaaattattgttatattgctacttcctgtgccaacttttggcctgttcagtaggcctagcagctgcagtgctgcagctgcgctgcaacagcagctacagcggttggccagctgcagccgttgcactgggctgtgtagaacagccctgcagagccgaaaacgctgcagtttagacctaccgaacaggcccttttattgtggaaattggtctagtgtactatagcttttgcttactgtatgtcaaagcaatttgttgttagaggtccatatatgcaatcttcaattattttatacttttggtgatgcaaagcgtgacaaatatttttatcaatttcatgtagctgttaatgtttggacttgtatttttgtctttttttacgtaccataagctaatgaatcatgtaactatttgcatttgcagtggtgtcattggttttttgctatgtgcgaaagaaggtccagcagtgaacttcctttctcctgtgaatccaattgagaaactggaaggagctatggaagctggaagggaaatcagattttacaattcagaggttcactaacgttatttaattctgccattctctttcataagctcttattctgtactttccctcaaatatgtatctattttcaccctaatgcaagatttccattcaactttgttgtttaattgttagtcattgatgaactgcttgcttaataggttcatcgggctgcttttgttctgccaacatttgtaaggagagaactggaatcacacaatacttgtgctgaaaaggtaggttacttactgcctgttgctatttcttttcttttctgtctgcgaactgcgatgctatttcggattgttgtaatggaattattgctgatatacataatcttgatgccataacaggataaatcagaaaccaagccagtcgcgaaaccaaagaagatgaaaataatgccgaatagtgccattccgactgcttcctagattcgggcggccatatgcgacaaccatgttcgacgtccttagctacagtatatgccaactataagaggagaatgtcgctgtaactcttctgtcttaagtatggtatgttatgcctgactgaataaaagggaggaacagatgagatgtgaaccaaaataatgttcttcctgatccgtgagcactgttgtagtgttgcctgttgtacaaatgtatattgtcacagcactgatgtgtttattatatggatgtggagtgaatcgcatggataatgtgcctttttatcccctaaaatctgcaatcttccctggttc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0528600, RefSeq:Os06g0528600