Os06g0529800

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Revision as of 09:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0529800| Description = Zinc finger, N-recognin domain containing protein| Version = NM_001064310.1 GI:115468351 GeneID:4341197| Length = 63...")
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Gene Name

Os06g0529800

Description

Zinc finger, N-recognin domain containing protein

Version

NM_001064310.1 GI:115468351 GeneID:4341197

Length

6316 bp

Definition

Oryza sativa Japonica Group Os06g0529800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:20540230..20546545

Sequence Coding Region

20540369..20540479,20540603..20540761,20543185..20543445,20543983..20544621,20546177..20546269

Expression

GEO Profiles:Os06g0529800

Genome Context

<gbrowseImage1> name=NC_008399:20540230..20546545 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:20540230..20546545 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccggcgaggggagcggcggcgagggcggtgcgggcgccttcgaggacgaggcggagccgacggtcaccatcggggagtacatcgaggggatcgaggccgaggagctggaggcggatttggtgctgggcggggacgacggcaaggagtgcacctacggcggcggctacctcaagcgccaggccgtcttctcctgcctcacctgcgtgccagcgggtgtcgctggagtctgcaccgcctgcagcctcgcctgccacgacggccatgaggtcgttgaactatggacaaagcgaaagtttcgttgtgattgtggcaactcaaagtttggaagtcatgtttgcaaactttgccctgagaaagatccagagaatccagtgaattcttataaccataacttcaaagggtcctattgcacatgtggcaggccttatcctgatccagaagctgaaaagcaagttgaaatgatacaatgctgtatttgtgaggattggttccacgaggatcatattggtcttaactccattgaagagataccacgagatgaggaaggggagccactctacgaggatttcatatgccccaaatgctcacctaagtgctatttcttgaaattatatccggatactatttgggcatctaataagcagagttctgcaccacaagctgagactaccaattcaactgttatgaatggaaattcaagccttggtgacatagagaaaagtgaaaatggtgctcttataaatcatttgaattgtgaaaagacctctgacaatgagaattgcccaaaagacagtgtagctccagaaaaggccagtctggatgacagttctgatggcaaatgtaagctaggaatgaacatttgttcaaatacaccatcagctgattcagagaaaaagatgccgttttttatgtcaaaaagctggagagaggttatctgtagatgtgaaacttgcaccgacttctatgcacaacaaggtgttgcgtaccttatagacaaggaagactctattgaggagtatgagaaggttgctaagcagaagagggaaaagaagttggagcagcaggaaggagttgaagcaaactttcttaattcactcgaccatgtacagaagattgagattttgagtggcatcaatgacatgaagaatgagcttcagtcttttctggaaacttttgattcatcaaaaccggtcacatctgaagatatacgagctgtttttgagaatcttgctaagaagaaaaaacagaggttgtcatga</cdnaseq>

Protein Sequence

<aaseq>MAGEGSGGEGGAGAFEDEAEPTVTIGEYIEGIEAEELEADLVLG GDDGKECTYGGGYLKRQAVFSCLTCVPAGVAGVCTACSLACHDGHEVVELWTKRKFRC DCGNSKFGSHVCKLCPEKDPENPVNSYNHNFKGSYCTCGRPYPDPEAEKQVEMIQCCI CEDWFHEDHIGLNSIEEIPRDEEGEPLYEDFICPKCSPKCYFLKLYPDTIWASNKQSS APQAETTNSTVMNGNSSLGDIEKSENGALINHLNCEKTSDNENCPKDSVAPEKASLDD SSDGKCKLGMNICSNTPSADSEKKMPFFMSKSWREVICRCETCTDFYAQQGVAYLIDK EDSIEEYEKVAKQKREKKLEQQEGVEANFLNSLDHVQKIEILSGINDMKNELQSFLET FDSSKPVTSEDIRAVFENLAKKKKQRLS</aaseq>

Gene Sequence

<dnaseqindica>140..250#374..532#2956..3216#3754..4392#5948..6040#acccccccaccccccacaattttttctccttttccactctcacaccccgcctcctcttcctcgtcacttcccaatccaaaatccaatcgcggggttgccaaaccctaaccctaggcaccgctcgagggaggcggcggcgatggccggcgaggggagcggcggcgagggcggtgcgggcgccttcgaggacgaggcggagccgacggtcaccatcggggagtacatcgaggggatcgaggccgaggagctggtaaaaaaaaaaaaaccgcgcccccaaaaccctagctagctgatttcgaccccgaggtggtggctgcgttgctcacgcttgattttgatgttccgttttgttattggggggcgtgaaccctaggaggcggatttggtgctgggcggggacgacggcaaggagtgcacctacggcggcggctacctcaagcgccaggccgtcttctcctgcctcacctgcgtgccagcgggtgtcgctggagtctgcaccgcctgcagcctcgcctgccacgacggccatgaggtgagctgatcgatcccccatcggtgctccgctgcaatttttagttgtaaacatcctatacttgcttgtatagttgtgtggattagtatgtttgttcaagttgcagctgggattagtgtcaatgtttatatgggtgagaaggatgagcgctacaagagttattttaggtgagatcttgatccaagtttcttagcggggtgattaagtttgtgctgtaactgcggattggcttgccggctgtagaacaagtggttcacaatgctgtaatggtgttgtgagctgtgactttagatttctagattattcatggtttcagcttattatgcttggtgagcagagccatgcattcttccatgaattgaattcttaaaacttgttgcccactgtctctggctgtgcattaggagcgttattgtttaatggcaaagtggtttatgttgtgctctaggattgagcgtcatctactgtgacatttgtgataccgttgagattatatctagaacagggtctgtgtagcagagctgtttggtcaggaacataaagacctatttcacggattgtttagtgctttctgatgaatatagaatgccacattgtagatgagacgcgtttgttcaaggctgaaatgcgtattgaaattgatgcacatgcattggtattaagtgattcatgcaatgctaggcgttgcattagcagttgccaaattatctattgccatcttctgtattaagtatctatatgactgggtgatggtaattctgttatcaaagaaattgaatcatgtcatttatttgtactaacacacttaccggtagatagaagctttggtatactgactggtagaactatgtgaatattcagtgcccaatgggggctttcagtgtatgactccgatgtacgtatgtggttttctttatatgatggttgatctacattgaaaatagatggtagccaaccatgaagtgtatcttactatcttttacaaatttgcctatttggttgaaacagtggtttgaatgatttgcaatccaatgctttcctttttgagggaaatcttttgtaataaaagtttgcgtggtgtgaaaggggggcggggggggggggggataggtcatggtgcaatgcagggcagcacgatgagaagttatcaactgaattgactgttagggcacgacaagcatgttgtctcttaggctgtttctaagcctccacatcatttcatgacattgtttaacattatggtttgagcatgcctgtaagagcaagaatattttcttggtcggtttactctaatttattttagttagtaaactcctttaagatactcctacctgcaaggtagtaactagtaacaattggatgctcctcccaacatgtagtgacagcataaaaagggaaggaggaatgcacataagcgcccttccaaaaaactgaatcacaggacaattcctcattcatgtcggttgtaattttgaatctcaaatcataatacatgaccaaatagataaaatcactgtccaattattcaaaatttctgttatattgtgaaattaaaacaagcatgtttgctttatagtacatgtatttgcatttagatataacactggaaatttgtttgcaagttttgatctgagtgtttaagtatattcaaatatactcttagataatatttttacttatgagttttttatattgcaatgcaaatttataatatagcatatgagattactttttgtgtgcaattacttgcctaacagacaaccatgtttgtactggcaggcaaatagagattatttttctgtatgtataacgtattaaatgagatagcctaacatacttgtatggggattgcttctttacaatgaaagatgaagtttccttgatggtctagtattgtttttatagtctatgaatcattttgagactcttgattatatctcttggactatagtgtcttgtatgtgcactgctacttcccaactcctttttattattgcctgctctattggagcattagttttggtggtgaaattatgtgtgtgtatttattttaattggtgatattctattcagtggattgagtacatcaggtcgtgtggtgtgaccacaaagtcatgattcattcttggtgatatatgttggtagactgcggctatgtagtgtatctggggcacctaggagcataaatattattatattacagccgcacagtattagatgttataaaacttcatggtggattcagttaatgatattttataatattatctttttgtttcgatatttaatcctggtcagtatagattctcatctgcatcataggaaattaggaaatacagcattataattagttactatgttctgctattttttgtctttactagcgcacacaactgatgcttggatggttctttttgctaaaggtcgttgaactatggacaaagcgaaagtttcgttgtgattgtggcaactcaaagtttggaagtcatgtttgcaaactttgccctgagaaagatccagagaatccagtgaattcttataaccataacttcaaagggtcctattgcacatgtggcaggccttatcctgatccagaagctgaaaagcaagttgaaatgatacaatgctgtatttgtgaggattggttccacgaggatcatattggtcttaactccattgaagaggttacttttacttgcagcacgcccttccttaattgcatcatatttgttaacttctccttttttctaatccttatgtgagttttgcatggctgtacgacctgtatctgcaatattgcaattgtgtcctttttgccaataaacatactgtttatatttatgaaagcatagcattgcatacaatgtgatattttctggtttcttctgacttccgagctttcatgctcgatgaaactagaaacaaatgcattgcatgatcaatgccttcaagtattgttcatataaattttgttcttcagaagacaattgcccatgtgataattatgatacttcaaacctagcattttttcctggccatcgaagcatatatattgatgtagcacattttgctgtgaatttgatacctacttgttgtagcctcattcttttcgtttagtcaaaccaacttttgtccatggtatacatgtggcatcttcaatttacttatgtactttattgcacatcgtaatttcataattgctttttttttttaccttgcagataccacgagatgaggaaggggagccactctacgaggatttcatatgccccaaatgctcacctaagtgctatttcttgaaattatatccggatactatttgggcatctaataagcagagttctgcaccacaagctgagactaccaattcaactgttatgaatggaaattcaagccttggtgacatagagaaaagtgaaaatggtgctcttataaatcatttgaattgtgaaaagacctctgacaatgagaattgcccaaaagacagtgtagctccagaaaaggccagtctggatgacagttctgatggcaaatgtaagctaggaatgaacatttgttcaaatacaccatcagctgattcagagaaaaagatgccgttttttatgtcaaaaagctggagagaggttatctgtagatgtgaaacttgcaccgacttctatgcacaacaaggtgttgcgtaccttatagacaaggaagactctattgaggagtatgagaaggttgctaagcagaagagggaaaagaagttggagcagcaggaaggagttgaagcaaactttcttaattcactcgaccatgtacagaagattgagattttgagtggcatcaatgacatgaagaatgagcttcagtcttttctggtaaagttatcttatttggttgtttactttttgggtgccatacaaatttgcatatgtttggtacctgtagctaactcgcaatcaccaaagggcatagaaaaattaaatgtttgttcaaatgcattgaaaatggcacatggctagtctagaataattatacctatgctgaggcactgtaggtagtactaactactgagtattatgggaaatagaaaatagaagctgttgtgcattgacaaaaaaattggcttttattcaaatagcaatctgatcaaaatcactagagcaacattaaagtagtaaaccaaccaccattttaaagataatggtgatttcattaagcaaatgaaagcgtctgacttttgcaccatcttgcacttggccaaaaacataaccacatggaaaaaaaaagaaaaaaagaaaaagagtaccacagggacctcctctattgcatattgtgttaaaacatctctataactaagcctatggttgctaaaccacctaatgtgggataaaagaaccttggctaatgcgttagtataccgaccttccggtaaaaggagtcaattggtagataacctgcataggtgagtgaactgcattggtagataaactacgtcattatgtgtgcactgtgccactgcacctcgtagcctaacctaatgcactagttccatgcataagtaacttcacttaaggattagacattccctgtaaccaatccccaaacatttgtttatccagttaaaattatgctgcgtgtaaattaccagctttatttaagacattctcttcactggggattaagtatcagactaatgtttaccaacttggtaaactgtgcctggaaattaaattaagtacagggggggggtgatggattatccatcatgcattttgcataaaaaaatgtcaacaaccagaacatggatcattttccagcacttctataacttgtatgatgaattatcagagtatttcgcaaataaatggtgatacttcccatgtttcagtatcagggtttgagttctaaacacgatcaacgcattctaaacatgcagtgccaaaattgcatgcatgtctaaccagtatgttatgctgatatacagcgaagtttcattgttttcagctgcatatgcatttaacttgtttctattttgagctccatcatttgcgctttagcttattagccacaacaaaattttaaacttcaaaactttttaagagttgattttgatggtttttcatcgtggtttatttttccaccattggctttaagttgctaagaacacatatataaaagttttacccacattattttttggtcgctattagctatgacttataagcattgtgtcaaaaaattcttctgtggtgtatatctgcatcaccatgttagtttctttaaaaggaaatgaccatttgtcaatgttatccgtttcaacaccaatccattctcttgataatccccatatattttttttatggggatacctgtattatctatctggtttgtcacctgactggtcctttccctcgttggcacttcgatcaggaaacttttgattcatcaaaaccggtcacatctgaagatatacgagctgtttttgagaatcttgctaagaagaaaaaacagaggttgtcatgaaactcagctgcttggggttctgtttgagactaatatatcccactgccggtcgatcgagcagtttttctggccactcccccgtgaatttatcgttcgctatgtcatggctattgtgtcctgttacctagcttgtactcgacttctaatgtagttagcagaggtagtaatgctaaatgctccgaactgagcttctggtagatgctccagggcagcagaacaaaatgtttgctcctttgtatcaaatcaaaagaactttgtgacgtggtaatttacatt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0529800, RefSeq:Os06g0529800