BGIOSGA035439

From RiceWiki
Revision as of 18:21, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA035439

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035439, complete gene.

LocusTag

OS11G0557500

Ensembl Transcript ID

BGIOSGA035439-TA

Ensembl Protein ID

BGIOSGA035439-PA

Length

2052

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:17441906..17443957

Sequence Coding Region

17441906..17443957

Genome Context

<gbrowseImage1> name=IndicaChromosome11:17441906..17443957 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:17441906..17443957 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCAATCGCGTTCACACGCCATGGCCGCGTTCGCCTTCGTCGTCGTCTTCCTCCTCTCCGGCGCGCCGGGAGCCCGGTCGCAGCAGCCGTACGGCTCGCAGGTGGCCGACTGCCCCAACAAGCACAACGACACCGGCCTCCTGGGCTACTTCTGCAGCAGCGGCGGCGGCGGCGGCGCGCCGTCGTCGTCGTCGTCGTCGTGCCAGACCTACCTCACCTTCCACGCCACGCCGCGCTACCCCGACCTCGCCGCCATCGCGTCGCTCCTCGGCGCCGACGCGTCCAGCCTCGCCGCCGCGAACTCCGCGGCGTCGCCCACCGCGGCGCTCGCGCCGGGCGCCAAGGTGCTCGTCCCGGCGACCTGCTCCTGCACGGGCGCCGCCTACTACCAGCGGAACGCGACGTACGTGGCGGTCGCCGGCGACACGCTGCTGGTGATCGCGAACGACACGTTCCAGGGCCTGTCCACGTGCCAGGCGGTGCAGGAGCAGGCCCTCGGCGACGCGCCGGCGAGGTCGCTCCTGGCGGGGCAGCGCGTCACCGTGCCGCTCCGGTGCGCGTGCCCGAGCGCCGCCCAGGCCGCCGCCGGCGTGAGGTACCTGGTGACGTACCTGGTCGACGAGTTCGACGAGGTGGGCGCCATCGCTGCGAGGTTCGGCGTCGACGCCGGGAACATCTCGGCGGCCAACGAGATGGCCATTACTGACACCATATACCCTTTCACAACGCTGCTCATCCCCGTCAAGTCCAAGCCCGACGTGTCGCAGCTCCGGTCGCCGCCGCCGCCGCCTCCTCCGCCGCCGGCGGCGCCTGCTCCGACCACGAACCGCAAGAACCACACCGGAGTCTACGTCGGCATCGGTGCGGCCGCCGTGGCTGTTCTCGCCGTGGTCACCGCCGTTGTGGCTGCCCTTGCTGTGAGGGCGAGGAGGCGGCGACGGCGAGCCACCGCCGCTGTCGCTGCCGCCGGAGGCAAGGGCGGTAAAGGCAACGACAAGGCGTCGCCGGCGTTCACCGGCGGCGAGGTGTCCGTGTCGATCAGCGAGGCGTTCTCGGGCCTCTCCGACATCAAGTCCTCCCTGAAGGTGTTCACCTACGCGGAGCTCGCGGCGGCGACCGACGGCTTCAGCCCGGACCGCCGCGTCGGCGGGTCGGTGTACCGCGCCGTGTTCAACGGCGACGCGGCCGCTGTGGAGGTCGTGGACCGGGACGTGTCGGCGGAGGTGGAGATCATGAGGAAGATCAACCACCTCAACCTTGTCAGGCTCATCGGCCTCTGCCACCACCGCGGCCGGTGGTACCTCGTCTCGGAGTACGCCGAGCACGGCACGCTCCGCGACCGCCTCCTCGCCGGCGGCGGCGCGCCGCCGCTGAGCTGGTCGCAGCGCGTGCAGGTGGCCCTCGACGTCGCCGAGGGGCTCCGCTACCTGCACGGGTACACGCGGCCGCCGTACGTGCACATGGACGTCAGCAGCGACAGCGTCCTCCTCGCCGGCGGCGCCGACCTCCGCGGCAAGCTCCGCAACTTCGGCGGCGCCAGGGTCATCCGCGCCGGCGGCGGCGAGGCGTTCACGATGACGAGCAACATCGCCGGATCGCGCGGGTACACGGCGCCGGAGTACCTGGAGCACGGCGTCGTGTCGCCCAAGGCCGACGTGTACTCCCTCGGCGTCGTGCTCCTGGAGCTCGTCACCGGCAAGGGCGTCGACGAGCTGGAGGCCGACGGCGCCGGCGACCCGTTCGCCGGCATGAACGCGCTGGCCGGAGACCTCGACGGCGGCAGCGAAGACGACGCGGCGGTGACGAGGAGAATGGAGGAGTTCTTGGACCCGGCGATGGCGGCGACCGGGAGCAGCTGCCCGCGCGAGGCCGTGGCGATGATGGTGAAGCTGATCGAGAGGTGCGTCCGCCGCGACGCGGCGGCGCGGCCGGGAATGGGGGAGGTGGCGCAGCATCTGCTGATGTTGCACGGCGTCTCCGGAGACGGCTGGCACAGCTCGCTGGAGCACTACCGGAGCTCCGGCGGCGACGGCGGCGAACAGCCATAG</cdnaseq>

Protein Sequence

<aaseq>MAQSRSHAMAAFAFVVVFLLSGAPGARSQQPYGSQVADCPNKHNDTGLLGYFCSSGGGGGAPSSSSSSCQTYLTFHATPRYPDLAAIASLLGADASSLAAANSAASPTAALAPGAKVLVPATCSCTGAAYYQRNATYVAVAGDTLLVIANDTFQGLSTCQAVQEQALGDAPARSLLAGQRVTVPLRCACPSAAQAAAGVRYLVTYLVDEFDEVGAIAARFGVDAGNISAANEMAITDTIYPFTTLLIPVKSKPDVSQLRSPPPPPPPPPAAPAPTTNRKNHTGVYVGIGAAAVAVLAVVTAVVAALAVRARRRRRRATAAVAAAGGKGGKGNDKASPAFTGGEVSVSISEAFSGLSDIKSSLKVFTYAELAAATDGFSPDRRVGGSVYRAVFNGDAAAVEVVDRDVSAEVEIMRKINHLNLVRLIGLCHHRGRWYLVSEYAEHGTLRDRLLAGGGAPPLSWSQRVQVALDVAEGLRYLHGYTRPPYVHMDVSSDSVLLAGGADLRGKLRNFGGARVIRAGGGEAFTMTSNIAGSRGYTAPEYLEHGVVSPKADVYSLGVVLLELVTGKGVDELEADGAGDPFAGMNALAGDLDGGSEDDAAVTRRMEEFLDPAMAATGSSCPREAVAMMVKLIERCVRRDAAARPGMGEVAQHLLMLHGVSGDGWHSSLEHYRSSGGDGGEQP</aaseq>

Gene Sequence

<dnaseqindica>1..2052#ATGGCGCAATCGCGTTCACACGCCATGGCCGCGTTCGCCTTCGTCGTCGTCTTCCTCCTCTCCGGCGCGCCGGGAGCCCGGTCGCAGCAGCCGTACGGCTCGCAGGTGGCCGACTGCCCCAACAAGCACAACGACACCGGCCTCCTGGGCTACTTCTGCAGCAGCGGCGGCGGCGGCGGCGCGCCGTCGTCGTCGTCGTCGTCGTGCCAGACCTACCTCACCTTCCACGCCACGCCGCGCTACCCCGACCTCGCCGCCATCGCGTCGCTCCTCGGCGCCGACGCGTCCAGCCTCGCCGCCGCGAACTCCGCGGCGTCGCCCACCGCGGCGCTCGCGCCGGGCGCCAAGGTGCTCGTCCCGGCGACCTGCTCCTGCACGGGCGCCGCCTACTACCAGCGGAACGCGACGTACGTGGCGGTCGCCGGCGACACGCTGCTGGTGATCGCGAACGACACGTTCCAGGGCCTGTCCACGTGCCAGGCGGTGCAGGAGCAGGCCCTCGGCGACGCGCCGGCGAGGTCGCTCCTGGCGGGGCAGCGCGTCACCGTGCCGCTCCGGTGCGCGTGCCCGAGCGCCGCCCAGGCCGCCGCCGGCGTGAGGTACCTGGTGACGTACCTGGTCGACGAGTTCGACGAGGTGGGCGCCATCGCTGCGAGGTTCGGCGTCGACGCCGGGAACATCTCGGCGGCCAACGAGATGGCCATTACTGACACCATATACCCTTTCACAACGCTGCTCATCCCCGTCAAGTCCAAGCCCGACGTGTCGCAGCTCCGGTCGCCGCCGCCGCCGCCTCCTCCGCCGCCGGCGGCGCCTGCTCCGACCACGAACCGCAAGAACCACACCGGAGTCTACGTCGGCATCGGTGCGGCCGCCGTGGCTGTTCTCGCCGTGGTCACCGCCGTTGTGGCTGCCCTTGCTGTGAGGGCGAGGAGGCGGCGACGGCGAGCCACCGCCGCTGTCGCTGCCGCCGGAGGCAAGGGCGGTAAAGGCAACGACAAGGCGTCGCCGGCGTTCACCGGCGGCGAGGTGTCCGTGTCGATCAGCGAGGCGTTCTCGGGCCTCTCCGACATCAAGTCCTCCCTGAAGGTGTTCACCTACGCGGAGCTCGCGGCGGCGACCGACGGCTTCAGCCCGGACCGCCGCGTCGGCGGGTCGGTGTACCGCGCCGTGTTCAACGGCGACGCGGCCGCTGTGGAGGTCGTGGACCGGGACGTGTCGGCGGAGGTGGAGATCATGAGGAAGATCAACCACCTCAACCTTGTCAGGCTCATCGGCCTCTGCCACCACCGCGGCCGGTGGTACCTCGTCTCGGAGTACGCCGAGCACGGCACGCTCCGCGACCGCCTCCTCGCCGGCGGCGGCGCGCCGCCGCTGAGCTGGTCGCAGCGCGTGCAGGTGGCCCTCGACGTCGCCGAGGGGCTCCGCTACCTGCACGGGTACACGCGGCCGCCGTACGTGCACATGGACGTCAGCAGCGACAGCGTCCTCCTCGCCGGCGGCGCCGACCTCCGCGGCAAGCTCCGCAACTTCGGCGGCGCCAGGGTCATCCGCGCCGGCGGCGGCGAGGCGTTCACGATGACGAGCAACATCGCCGGATCGCGCGGGTACACGGCGCCGGAGTACCTGGAGCACGGCGTCGTGTCGCCCAAGGCCGACGTGTACTCCCTCGGCGTCGTGCTCCTGGAGCTCGTCACCGGCAAGGGCGTCGACGAGCTGGAGGCCGACGGCGCCGGCGACCCGTTCGCCGGCATGAACGCGCTGGCCGGAGACCTCGACGGCGGCAGCGAAGACGACGCGGCGGTGACGAGGAGAATGGAGGAGTTCTTGGACCCGGCGATGGCGGCGACCGGGAGCAGCTGCCCGCGCGAGGCCGTGGCGATGATGGTGAAGCTGATCGAGAGGTGCGTCCGCCGCGACGCGGCGGCGCGGCCGGGAATGGGGGAGGTGGCGCAGCATCTGCTGATGTTGCACGGCGTCTCCGGAGACGGCTGGCACAGCTCGCTGGAGCACTACCGGAGCTCCGGCGGCGACGGCGGCGAACAGCCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035439