Os06g0530700

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Revision as of 09:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0530700| Description = contains InterPro domain(s): IPR006677, IPR006678| Version = NM_001064316.1 GI:115468363 GeneID:4341203| Length = 17...")
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Gene Name

Os06g0530700

Description

contains InterPro domain(s): IPR006677, IPR006678

Version

NM_001064316.1 GI:115468363 GeneID:4341203

Length

1784 bp

Definition

Oryza sativa Japonica Group Os06g0530700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:20660478..20662261

Sequence Coding Region

20660660..20661541

Expression

GEO Profiles:Os06g0530700

Genome Context

<gbrowseImage1> name=NC_008399:20660478..20662261 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:20660478..20662261 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatttgccaggtccaagatggaagaagggcaaagatggcaaggactttgcgtccctagcagcagctaaccccatgtcagccattgtttctgagctcaaggcctcattcataagctcaaagcccgtggcaattttgtctggtccgggtggtagcgccgttcttggagttgggccagagcaagccgtgatcctaaaccgtgctgcctttggccatgccatcgaaaatgcaacagcacagaagcattggttccaactcagccccgaggaggtcttttacctatgccatgctctgaattgcatcagggttgactcactggacaataagcaaatgagtgaaattgaactgtgggattactttaggtctggatcggagtcatttccggagatgtacaaggcttacgcacatctgagattgaagaactgggtggtgagatcagggctgcagtatggtgcggattttgtagcttaccgtcaccatccagcgctcgtccactcggaatttgcagtggttgtagttccagaaggtgcagagtttggcaataggtgtggccgtctggaggtgtggtctgatctactatgtgcactccgggcttctggcagtgtagcaaagacattactggttctgacaattagcagcagcagtaaatgtgaactgagctccccagattgtttggaacagcttgttgttcacgagagaacgatcacaagatggatactgcagcaatgccgtgaacaacgatgtgaaccaagcagagatgaagtgaatagggaagaactgattattgaaaaggaaagtgtagtatttaatcactggggtgtgatactaggcttcactgttctatctggcttgcttgtgtacaggttgaaattcagacaatag</cdnaseq>

Protein Sequence

<aaseq>MDLPGPRWKKGKDGKDFASLAAANPMSAIVSELKASFISSKPVA ILSGPGGSAVLGVGPEQAVILNRAAFGHAIENATAQKHWFQLSPEEVFYLCHALNCIR VDSLDNKQMSEIELWDYFRSGSESFPEMYKAYAHLRLKNWVVRSGLQYGADFVAYRHH PALVHSEFAVVVVPEGAEFGNRCGRLEVWSDLLCALRASGSVAKTLLVLTISSSSKCE LSSPDCLEQLVVHERTITRWILQQCREQRCEPSRDEVNREELIIEKESVVFNHWGVIL GFTVLSGLLVYRLKFRQ</aaseq>

Gene Sequence

<dnaseqindica>721..1602#accgccctcacttccaccgccgccgccgccgccgccgtgtaccccctcccccgccgcttgacgcgcctcctcttcgtcgacccaatccctccgtcgggtacgccgccgctgcccccctacacccttgcccctcctttcctatttacacaggcggatcgatgccgtgggagagccggctgcccgcggaggtgcgtggaggcggcggcctgcggcgcgggcggggaggcattaaggcgaggtgcgcgggggggggggggggtcgagtactgcaagcgagctgcgagcagaggagctctgatttagtgatcttttttttcttttttccgtttctgatttagtgatctctgaagatggattctcctcgttggtttgcagctagggctctgacactgaccgtggtccgtgaggtagggacgtagggtatggtattgtgaaatttttaggccgattcgacaaattctattttcatgtgatttgattatcaatgattatgttaaagtgatttgttaatttccgatttagttctgttaacgcgcattgatgcatattatgttccaaagattattgatatatctatgttctacaaataatatgttctataaattggtgatctatgttattaatattcatttgtttggacaacgatgtttattttacttgtttttgctattcactccagcacttggccactagtccctgctctgccactgggttcagcatatggatttgccaggtccaagatggaagaagggcaaagatggcaaggactttgcgtccctagcagcagctaaccccatgtcagccattgtttctgagctcaaggcctcattcataagctcaaagcccgtggcaattttgtctggtccgggtggtagcgccgttcttggagttgggccagagcaagccgtgatcctaaaccgtgctgcctttggccatgccatcgaaaatgcaacagcacagaagcattggttccaactcagccccgaggaggtcttttacctatgccatgctctgaattgcatcagggttgactcactggacaataagcaaatgagtgaaattgaactgtgggattactttaggtctggatcggagtcatttccggagatgtacaaggcttacgcacatctgagattgaagaactgggtggtgagatcagggctgcagtatggtgcggattttgtagcttaccgtcaccatccagcgctcgtccactcggaatttgcagtggttgtagttccagaaggtgcagagtttggcaataggtgtggccgtctggaggtgtggtctgatctactatgtgcactccgggcttctggcagtgtagcaaagacattactggttctgacaattagcagcagcagtaaatgtgaactgagctccccagattgtttggaacagcttgttgttcacgagagaacgatcacaagatggatactgcagcaatgccgtgaacaacgatgtgaaccaagcagagatgaagtgaatagggaagaactgattattgaaaaggaaagtgtagtatttaatcactggggtgtgatactaggcttcactgttctatctggcttgcttgtgtacaggttgaaattcagacaatagagttaacatttctgtgcacctgtgttgttgaggtgttagcttggaatttgaaatcctgagttgtactcttttgtgagccttgcttctggtttctagtctagatatgacaaataattatagccacgcatctgacttggacagcagagaaacgtttgaattttgatctgtcttagatcttgaat</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0530700, RefSeq:Os06g0530700