Os06g0534900

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Revision as of 09:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0534900| Description = Zinc finger, RING-type domain containing protein| Version = NM_001187904.1 GI:297724938 GeneID:9270717| Length = 180...")
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Gene Name

Os06g0534900

Description

Zinc finger, RING-type domain containing protein

Version

NM_001187904.1 GI:297724938 GeneID:9270717

Length

1802 bp

Definition

Oryza sativa Japonica Group Os06g0534900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:20896323..20898124

Sequence Coding Region

20896323..20896973,20897537..20898124

Expression

GEO Profiles:Os06g0534900

Genome Context

<gbrowseImage1> name=NC_008399:20896323..20898124 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:20896323..20898124 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgagggcggtgcggcctgcgccgtcggcggcggcggggcccgccgcaccgccgggcgacggcgaggcgcgcgcctgctacggcatcgtggtggcgtgcgtgtcgctgctgctgctgtgcgcgctcgtctccgccgtcggcgtcgccagggccttcgccgccaccggggtgctcgtcctgctgctcggcctcgccggctggctcgcgcccacggacgccttcgccgtcgcgctggcccccgagctctacgcggggaacgccggcggcggcggcggtagcgcccgcgcggcgccggcggtgcggctgcaggtgcgccggtgcgcgtcgtgcgggctcgccgcccaggccatcgacgcgctgcccgcgttcgcgtacgagccccccgccgccgacgtcgaggacggcggcgagggcaagccgcgcggcggcggcgcgctgtgtgcggtgtgcctggaggacgtcgtggccggcgagacggtgcggcggctgccgtcgtgcgggcacctcttccacgtggactgcatcgacatgtggctgcacgcgcaccggacttgcccgctctgccgccgcgacctctcgccggagaaggtcaccgcgaaatcctccgccgccgccgcgacggtctcctccaccgacgtgctgccgccgttcaaatcatcggagaaatcgctggtcgggatgcccgaggcggcggcggcggaggaggaaggcggtgatggctgctcgacgaggctagggtgctacggcttcatggcggtgaacgtcctgatggggctgtactgctccatcgcctacgccgtgagcgccaccgtggcgggcgccgtcgccgtcgcggtcgcgctcctcctgctggcgctcgccggcaggctggcgcagacgacgggaggaggctccgccgcggcggcggcgtcggggcggcggcggcggctgctgagctgcccgtgcgcgtgcgggctgatggcgcccggcgcgggggggatcggcgtgctgccggcgttcgcgtacgagcccggcggcggcggcggcggcgtgctgtgcgcggtgtgcctggaggacttgcgcggcggcgagatggtgcggcggctgccggcgtgcgggcacctgttccacgaggactgcgtcgacgtgtggctgcgcgtccgccggacttgcccgctctgccgccgcgtgctcccgccgcgcaagtccgtggcggccgcggcggcggcgtcggccgctgtgctgccgcctgtctga</cdnaseq>

Protein Sequence

<aaseq>MLRAVRPAPSAAAGPAAPPGDGEARACYGIVVACVSLLLLCALV SAVGVARAFAATGVLVLLLGLAGWLAPTDAFAVALAPELYAGNAGGGGGSARAAPAVR LQVRRCASCGLAAQAIDALPAFAYEPPAADVEDGGEGKPRGGGALCAVCLEDVVAGET VRRLPSCGHLFHVDCIDMWLHAHRTCPLCRRDLSPEKVTAKSSAAAATVSSTDVLPPF KSSEKSLVGMPEAAAAEEEGGDGCSTRLGCYGFMAVNVLMGLYCSIAYAVSATVAGAV AVAVALLLLALAGRLAQTTGGGSAAAAASGRRRRLLSCPCACGLMAPGAGGIGVLPAF AYEPGGGGGGVLCAVCLEDLRGGEMVRRLPACGHLFHEDCVDVWLRVRRTCPLCRRVL PPRKSVAAAAAASAAVLPPV</aaseq>

Gene Sequence

<dnaseqindica>1..651#1215..1802#atgctgagggcggtgcggcctgcgccgtcggcggcggcggggcccgccgcaccgccgggcgacggcgaggcgcgcgcctgctacggcatcgtggtggcgtgcgtgtcgctgctgctgctgtgcgcgctcgtctccgccgtcggcgtcgccagggccttcgccgccaccggggtgctcgtcctgctgctcggcctcgccggctggctcgcgcccacggacgccttcgccgtcgcgctggcccccgagctctacgcggggaacgccggcggcggcggcggtagcgcccgcgcggcgccggcggtgcggctgcaggtgcgccggtgcgcgtcgtgcgggctcgccgcccaggccatcgacgcgctgcccgcgttcgcgtacgagccccccgccgccgacgtcgaggacggcggcgagggcaagccgcgcggcggcggcgcgctgtgtgcggtgtgcctggaggacgtcgtggccggcgagacggtgcggcggctgccgtcgtgcgggcacctcttccacgtggactgcatcgacatgtggctgcacgcgcaccggacttgcccgctctgccgccgcgacctctcgccggagaaggtcaccgcgaaatcctccgccgccgccgcgacggtctcctccaccgacgtgctgccgccggtgtgaaacgctaattcaccttgcttggtgttcactactaacatcacctagtgttgttattactgcgtcactgtacattaattccgaatgttctaccacttggtatactaactaattagcatttccaaaccagaaaagtgtgccctgtaaccgtgttctgtaacccattattttcgggatcaacaggacataataatcaaccaagattccataagattgtgaccaaaccggctatttggaatttagccggcataggacaatacagaaatctctacaaactctcaaattaatatactctactaactttgtgattgatgcaaacgcaaccgatttggacaggtgtacgtacttaaaatggtacggtaacagcaacggacgtgcttgacacgtctggaactcgtcgcccacgtcgagagcgtgacgctgctggtgtaatccgccagctatgttcatgcagatcgtgtgctagctactcatttcctagtgtttcttgtattcggcgtcgtcgctgcatttcgaaaatttcgtagcatttcgtaggaatttggcacgaaataaatcagttcaaatcatcggagaaatcgctggtcgggatgcccgaggcggcggcggcggaggaggaaggcggtgatggctgctcgacgaggctagggtgctacggcttcatggcggtgaacgtcctgatggggctgtactgctccatcgcctacgccgtgagcgccaccgtggcgggcgccgtcgccgtcgcggtcgcgctcctcctgctggcgctcgccggcaggctggcgcagacgacgggaggaggctccgccgcggcggcggcgtcggggcggcggcggcggctgctgagctgcccgtgcgcgtgcgggctgatggcgcccggcgcgggggggatcggcgtgctgccggcgttcgcgtacgagcccggcggcggcggcggcggcgtgctgtgcgcggtgtgcctggaggacttgcgcggcggcgagatggtgcggcggctgccggcgtgcgggcacctgttccacgaggactgcgtcgacgtgtggctgcgcgtccgccggacttgcccgctctgccgccgcgtgctcccgccgcgcaagtccgtggcggccgcggcggcggcgtcggccgctgtgctgccgcctgtctga</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0534900, RefSeq:Os06g0534900