Os09g0509500

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Revision as of 07:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0509500| Description = Esterase/lipase/thioesterase domain containing protein| Version = NM_001070165.1 GI:115480072 GeneID:4347534| Length...")
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Gene Name

Os09g0509500

Description

Esterase/lipase/thioesterase domain containing protein

Version

NM_001070165.1 GI:115480072 GeneID:4347534

Length

5048 bp

Definition

Oryza sativa Japonica Group Os09g0509500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20429117..20434164

Sequence Coding Region

20429117..20429307,20429488..20429597,20429740..20429825,20430118..20430231,20430405..20430774
,20430924..20431054,20431336..20431444,20431609..20431730,20431821..20431927
,20432155..20432259,20432362..20432520,20432779..20432834,20432908..20432959
,20433879..20434164

Expression

GEO Profiles:Os09g0509500

Genome Context

<gbrowseImage1> name=NC_008402:20429117..20434164 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:20429117..20434164 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgatgccggcgacggtggcggcagcgccgcggcccctcctgcccggcctgccacgccgcgggacggcgccgccgcgggggcggtggagcgcgtccgcggcgtcggcggcgtcgcggggcgtggccgcgaaggcggcgaggagaggggtgagggagtacgtggaggcggcgcgggagatggtgcggcggccggacggcggcccggcgaggtggttctcgccgctggagtgcggcggcggcggagggcggctgcccggcgcgcccacgatgctctacttgcccggaattgatggagttggcttaggactgatccggcatcatgagagattagcaaagatgtttgatatgtggtgcttacatatacctgttgaagattgtacgtcctttgaaggactagttgagtatgtggagagtgcagtgaaatcagagggccagagagcaagagacagaccagtctatctagtcggagaatccgttggagcatgcattgctcttgccgtggcggcgcgaaatccagatatcgatttggtattgatcctagtcaacccaggaacatctttccataagtctcagctgcagtctctctcagtcttcttggatttggtccctgaaccgttccatttaaccacaccgcagttgctgaatttcctgacaggcaacttcatgaagataccgtcgactattgttgggcgtggtttttcatttcaagaagctggtcaagcactatcagagatcaccactagtctattgccttctcttatgtctttgcttgatgttctgccaaaggaatctattgtttggaagttgaaaatgctgagaacagcgtcatcatttgtcaattcccgtttgcatgcagttaaagcgcagactttggtgcttgctagttggaatgatgaactgctaccaagccgagaagaagctgaaaggctacgtgacgctctagagaaatgcagaatccgtaatttcaaagacaacggtcacaaaatattgctggaagctgaatttgatctggcaacggccatcaaaggagctgggtactatcgccgctcgttggagacggactttgtttcggactatctgccactgactcctgatgaatttcagaaggcaactgatcacatcaggatgttgcagtacatagcaaacccagtgatgctatcaacactgcctgatggaaagattgtgaggggtttgtcaggcctacccaagcaaggtcctgcagtgattgttgggtaccacatgctgttggggtttgagctcggacctctggtgaccggagtgctgagaagctctgggatccacatcagaggcttggctcatcccttcatgtttgacaagaagaaggagaagatcatgccggatccgtcctactacgatatgcatcggatcatgggcgccgtgcctgtcaccgcaggcaatttttacaagcttctcgcggagaagcacttcgtgttgctgtacccgggaggcgcgcgagaagcgcttcatagaaagggagaggagtataagttgttttggccagagcagtctgaatttgtgaggatggcatcaaggtttggagcaacaataataccatttggagtagttggagaagatgatatatgtgatatgttgttagactacgacgatcttatgaagattccattctatgacatccttgacaggatgctaaatgaagatggtgtgaaactaaggactgattctaccggagaattaaaatatcaaagaatccatccagtagtggctgccccaaagataccagggaggttttatttcatctttgggaagccaattgaaacaagagggagagaaaaggaactaagagacaaagagaacgcccaacacctctacctgaatgttaagtccgaagttgagagctgcatgaagtatctaaaggagaaaagagagaaggacccttacaggaatatactcgccaggcttctctatcagatggttcatggtcttgatgcagaagttcccacatttgatccgtga</cdnaseq>

Protein Sequence

<aaseq>MPMPATVAAAPRPLLPGLPRRGTAPPRGRWSASAASAASRGVAA KAARRGVREYVEAAREMVRRPDGGPARWFSPLECGGGGGRLPGAPTMLYLPGIDGVGL GLIRHHERLAKMFDMWCLHIPVEDCTSFEGLVEYVESAVKSEGQRARDRPVYLVGESV GACIALAVAARNPDIDLVLILVNPGTSFHKSQLQSLSVFLDLVPEPFHLTTPQLLNFL TGNFMKIPSTIVGRGFSFQEAGQALSEITTSLLPSLMSLLDVLPKESIVWKLKMLRTA SSFVNSRLHAVKAQTLVLASWNDELLPSREEAERLRDALEKCRIRNFKDNGHKILLEA EFDLATAIKGAGYYRRSLETDFVSDYLPLTPDEFQKATDHIRMLQYIANPVMLSTLPD GKIVRGLSGLPKQGPAVIVGYHMLLGFELGPLVTGVLRSSGIHIRGLAHPFMFDKKKE KIMPDPSYYDMHRIMGAVPVTAGNFYKLLAEKHFVLLYPGGAREALHRKGEEYKLFWP EQSEFVRMASRFGATIIPFGVVGEDDICDMLLDYDDLMKIPFYDILDRMLNEDGVKLR TDSTGELKYQRIHPVVAAPKIPGRFYFIFGKPIETRGREKELRDKENAQHLYLNVKSE VESCMKYLKEKREKDPYRNILARLLYQMVHGLDAEVPTFDP</aaseq>

Gene Sequence

<dnaseqindica>4858..5048#4568..4677#4340..4425#3934..4047#3391..3760#3111..3241#2721..2829#2435..2556#2238..2344#1906..2010#1645..1803#1331..1386#1206..1257#1..286#atgccgatgccggcgacggtggcggcagcgccgcggcccctcctgcccggcctgccacgccgcgggacggcgccgccgcgggggcggtggagcgcgtccgcggcgtcggcggcgtcgcggggcgtggccgcgaaggcggcgaggagaggggtgagggagtacgtggaggcggcgcgggagatggtgcggcggccggacggcggcccggcgaggtggttctcgccgctggagtgcggcggcggcggagggcggctgcccggcgcgcccacgatgctctacttgcccggtatgagcctctctctgaaaaaaaaaagaaaaataatttcctttttttaatcatgtgtgtctgcatattccttttttttttgtcaaataaataagtaaaacatgtgtttgaatactgtttatcttgtgaaactctgacaaagcatgatattgaatagtaccaagtgggtgtgttgaaaatgaaaatttgtttgaacagtacccccttttttttccctgaatttttatttcaattttgacaccatttaatcatgcaagattttctagtctgaaaccagagggttgtagggtaggcctgaaagcaggaccaaccacctttggcaattggcaatatttaagctcatcaagatcagtgcagcagcactaatttagacaacatgtcggcgattcggtgactcacccagatcatgccaaacaaaattttctaattgctcgcatgaagatctgcaatgctgaaaccataaacaataaaagcagtttgacaagccactacgaaaactcccagtaggccaatattagtagaatggggaaagggactggctttcttgaccagctcagttgtttactggtggttgatggccattggaagtggctggattagatggatggacagataatcagagactcactgttaatctgactgtttgatgcagcagacatgcttgcaaagtctggattcaggcttaggatcattgggttagagatttggtttttaaagtattcaagtatagtactgaaaatttgtgttttaaaaaaggtatagtactgaaagtcttatcccagtggaaatgcaacctactgcattatgggttggattgtcagaatatatgttcatacctttcattactttggttccaaccatttgagaaacacaagaaaaattaaaaatgggtaaccgttttcggtctttggtcttgcaggaattgatggagttggcttaggactgatccggcatcatgagagattagcaaagtaatgacaattttatgtataatgtatggctgttttatcttcactaccgctggtaattaattctgctttgcaggatgtttgatatgtggtgcttacatatacctgttgaagattgtacgtcctttgaaggtacactttcttgatgtctacttctcataaatgaagtagtgtctacttcccatatgctcctaattataattcaaagaatggacagaaatgctcatgtgcttgtagtttaagaagtataagtatataaaccttaatgatcttgaacttatcgtaatttcctgtaagaatatgatgcataagaaaccatgtttttagctcattttttggactaaacttatatagtttgtaaaaactctgaaactgtagtaatgaatacaggactagttgagtatgtggagagtgcagtgaaatcagagggccagagagcaagagacagaccagtctatctagtcggagaatccgttggagcatgcattgctcttgccgtggcggcgcgaaatccagatatcgatttggtattgatcctagtcaacccaggtcttgctgccattagccatagttttctgttctttctctgtttatcttctttcagtgacaagtgattactgacttatcttctgttgtatggttttcttgcaggaacatctttccataagtctcagctgcagtctctctcagtcttcttggatttggtccctgaaccgttccatttaaccacaccgcagttgctgaatttcctgacaggttcggttaacttctctatgagaatatttatgacttgtttgatggataaatgattttattttactcaactggggaagaagtataattgcatgtttagctcacttttctgcactttgagcctttatgaaattaatgagtagactcatttgaagccaagctcacccatcgcttcgcctatagctgattataagatgtaatgcttattagtgaccaaaaaatgtttttaggcaacttcatgaagataccgtcgactattgttgggcgtggtttttcatttcaagaagctggtcaagcactatcagagatcaccactagtctattgccttctcttatggtgagactcgaatctaaccattgctccaatttctttgtcagttcatgtctgaatcatcataatactaattttatgcccttgtttatgcagtctttgcttgatgttctgccaaaggaatctattgtttggaagttgaaaatgctgagaacagcgtcatcatttgtcaattcccgtttgcatgcagttaaagcgcagactttggtgcttgctaggtatgtttagctcctgataacttttatcatgtccttgcaattagcaatgtgcacattgctcttgatgctgtctttccatggattatatgatattaagtaatactgaaacttatggtcctccttcggactggatctgaagattctattctccttttcttttccagttggaatgatgaactgctaccaagccgagaagaagctgaaaggctacgtgacgctctagagaaatgcagaatccgtaatttcaaagacaacggtcacaaaatattgctggtatgaaagctcatgtttctctgcattacatattccaggcgtcttagaaaatgtattgatgttaagatctcactggtccaaggaagagaaaaagtgttttttatttgtcaattcaattttcaagtctgttcttgtcctacacatcgagcaaattccatccgtagtccaaattgcttagataactatgtccatccttgccatgtccatgttaagcttaagcctactttgacactattttcatctttggcatgtccatgttaactccttaaaatattggataggaagctgaatttgatctggcaacggccatcaaaggagctgggtactatcgccgctcgttggagacggactttgtttcggactatctgccactgactcctgatgaatttcagaaggcaactgatcacatcaggtaccatctctcaaaacaacttaagcttggtcaattcagaatccatgcaattcccctttacagggagcaaatttcctactgttggagtaataactaacaaattgtcacatgaaactgaacattttctactggatttctgaaactttcaggatgttgcagtacatagcaaacccagtgatgctatcaacactgcctgatggaaagattgtgaggggtttgtcaggcctacccaagcaaggtcctgcagtgattgttgggtaccacatgctgttggggtttgagctcggacctctggtgaccggagtgctgagaagctctgggatccacatcagaggcttggctcatcccttcatgtttgacaagaagaaggagaagatcatgccggatccgtcctactacgatatgcatcggatcatgggcgccgtgcctgtcaccgcaggcaatttttacaagcttctcgcggagaagcacttcgtgttgctgtacccgggaggcgcgcgagaagcgcttcatagaaaggtagcaacagttttggcagatggatcatagagccagtgttatcatgaaatcagtttgaatttggcagatagatcatagagtcagtgataccatgaaatcaatctgaatttggcatatagaacctgtgagatcatgaaatcaatctactgactagaggattggctgttcttcagggagaggagtataagttgttttggccagagcagtctgaatttgtgaggatggcatcaaggtttggagcaacaataataccatttggagtagttggagaagatgatatatgtgatgtgagtgcattcttactattaactaccaattattaatagatgcaaatctcctttgctgtctacatttttttttgcgaggaacctttgctgtctacatgtttggtctaaggatagataattatgctttacactatatattctaactgtaatcactaggattgacaagatttggcaggaaattttcccttccatgggaatttagttcctataggtgctcagagtaaaaaagttggcacctttttgccttgttttctggttattctattgtctaatgacagatgtaccacctcagatgttgttagactacgacgatcttatgaagattccattctatgacatccttgacaggatgctaaatgaagatggtgtgaaactaaggtatatatgctgcccatacgcccatacacaaaagtcaaaagagtttggatttaatttaattatagtgtttgtttttatgatgtctccagaattctttggaagaaaaaatgatctgatctcagtttacctcttggtttcataggactgattctaccggagaattaaaatatcaaagaatccatccagtagtggctgccccaaagataccagggaggttttatttcatctttgggaagccaattgaaacaagaggtacatctctaaagaactacgcaagtaaatctccaattaatatacctgtcgcacgcactgtctcatgacaagttaaacacgcttactttcttttggcaatctgaagataagctactaggctagaacacatgaagtgatgaagatgtttttccgagacctgatttttgcttgttttcatagggagagaaaaggaactaagagacaaagagaacgcccaacacctctacctgaatgttaagtccgaagttgagagctgcatgaagtatctaaaggagaaaagagagaaggacccttacaggaatatactcgccaggcttctctatcagatggttcatggtcttgatgcagaagttcccacatttgatccgtga</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0509500, RefSeq:Os09g0509500