Os06g0535400

From RiceWiki
Revision as of 09:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0535400| Description = Similar to E3 ubiquitin ligase EL5 (EC 6.3.2.-)| Version = NM_001064326.1 GI:115468383 GeneID:4341214| Length = 1068...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0535400

Description

Similar to E3 ubiquitin ligase EL5 (EC 6.3.2.-)

Version

NM_001064326.1 GI:115468383 GeneID:4341214

Length

1068 bp

Definition

Oryza sativa Japonica Group Os06g0535400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:20928306..20929373

Sequence Coding Region

20928397..20929152

Expression

GEO Profiles:Os06g0535400

Genome Context

<gbrowseImage1> name=NC_008399:20928306..20929373 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:20928306..20929373 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaactcccgtggctggatctgcccttcacgctgctgacgctgctgctggcgacgcggctcgcctacgactactacggcgtcgtcgcggccaccttcacggggagcttctcgctccagatcttcctcttctactgcttcgcgcgctggtaccgccacaccatcgccgcccgcgccgccgcagacgccgacggggatggcggcggcggcgcggtggcggatgaggaggcggcgccgcccgtgctgatcccgctgctggagggccggggcggtggaggcgggggcgcgggcgcggcgtcgtcgctggcgaaccggtgcttcgccgtggtgttcatggtgttcgtgccgctggtcatcgtggtgttcgagcggagccaggccgacgtcgtggcgtacgcgctctgcctcgccaacatcctcgtcatggtcgtctggctctcgcccgacgccgccgcggaccccgcgtcggcggccaagtcgttcctccgcctcagcgacgacgaggacgaaggcagctgcagcggcagcggccacggcgccgccgaggacaagtgctgcgtctgcctcgccgggatgcgggaggcgcaggcgctccgcgacctcccccggtgcggtcaccgcttccacgccaagtgcatcggcaagtggctcacggcgcacccgacgtgccccgtctgccgcaccacggccgtgccgccgccggcgccgctgcccgccagcggcgaccatgccgacgacgccatcacccctgtctag</cdnaseq>

Protein Sequence

<aaseq>MELPWLDLPFTLLTLLLATRLAYDYYGVVAATFTGSFSLQIFLF YCFARWYRHTIAARAAADADGDGGGGAVADEEAAPPVLIPLLEGRGGGGGGAGAASSL ANRCFAVVFMVFVPLVIVVFERSQADVVAYALCLANILVMVVWLSPDAAADPASAAKS FLRLSDDEDEGSCSGSGHGAAEDKCCVCLAGMREAQALRDLPRCGHRFHAKCIGKWLT AHPTCPVCRTTAVPPPAPLPASGDHADDAITPV</aaseq>

Gene Sequence

<dnaseqindica>92..847#ggaaggctagaaggcgatgggcgcggtggattcctcgaggtgaggaggaggtgatgtgctcggcggcgacggcggcggcggcgcggcggcgatggaactcccgtggctggatctgcccttcacgctgctgacgctgctgctggcgacgcggctcgcctacgactactacggcgtcgtcgcggccaccttcacggggagcttctcgctccagatcttcctcttctactgcttcgcgcgctggtaccgccacaccatcgccgcccgcgccgccgcagacgccgacggggatggcggcggcggcgcggtggcggatgaggaggcggcgccgcccgtgctgatcccgctgctggagggccggggcggtggaggcgggggcgcgggcgcggcgtcgtcgctggcgaaccggtgcttcgccgtggtgttcatggtgttcgtgccgctggtcatcgtggtgttcgagcggagccaggccgacgtcgtggcgtacgcgctctgcctcgccaacatcctcgtcatggtcgtctggctctcgcccgacgccgccgcggaccccgcgtcggcggccaagtcgttcctccgcctcagcgacgacgaggacgaaggcagctgcagcggcagcggccacggcgccgccgaggacaagtgctgcgtctgcctcgccgggatgcgggaggcgcaggcgctccgcgacctcccccggtgcggtcaccgcttccacgccaagtgcatcggcaagtggctcacggcgcacccgacgtgccccgtctgccgcaccacggccgtgccgccgccggcgccgctgcccgccagcggcgaccatgccgacgacgccatcacccctgtctagctctgcacatagtctgacagacaaactcaggtaaattaatttcttgtgctattaatctgtaaaattgttgggaaatttttttcttgaagatgttgtatatagatatatagctgtatgaatgaattgcctccaatttttcatgcatcaattggaaagaatggtaagtagtagtaatctgtaaattcttttgtaacattgctctatgaagattcaagattgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0535400, RefSeq:Os06g0535400