Os06g0546500

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Gene Name

Os06g0546500

Description

Similar to Class III peroxidase GvPx2b (Fragment)

Version

NM_001064355.1 GI:115468441 GeneID:4341247

Length

1461 bp

Definition

Oryza sativa Japonica Group Os06g0546500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:21553209..21554669

Sequence Coding Region

21553430..21553981,21554059..21554250,21554356..21554568

Expression

GEO Profiles:Os06g0546500

Genome Context

<gbrowseImage1> name=NC_008399:21553209..21554669 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:21553209..21554669 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctactcaatgggtgctcgtggtggttgctgtaatggccgtgctcttcgccggaggcgccgccggcgggcagctgtcgacgaggtactacgacggcaagtgcccgaacgtgcagagcatcgtgagggccgggatggcgcaggccgtggcggcggagccccggatgggcgcctccatcctccgcatgttcttccacgactgcttcgtcaacgggtgcgacgcgtccatcttgctcgacgacacggccaacttcaccggcgaaaagaacgccgggccgaacgccaactcggtgcgcgggtacgaggtgatcgacgccatcaagacccaggtcgaggcgtcctgcaacgccaccgtctcctgcgccgacatcctcgccctcgccgcgcgcgacgccgtcaacctgctgggcgggccgacgtggacggtgcagctgggtcgccgcgacgcgctgacggcgagccagagcgcggcgaacggcaacctgccggggccggggtccgacctcgccacgctcgtcaccatgttcggcaacaaggggctgtcgccgcgggacatgacggcgctgtcgggcgcgcacacgctggggcaggcccggtgcgccacgttccgcagccgcatcttcggcgacggcaacgtcgacgccgccttcgccgcgctccggcagcaggcgtgcccgcagtccggcggcgacacgacgctggcgcccatcgacgtgcagacgcccgacgcgttcgacaacgcctactacgcgaacctggtgaagaagcaggggctgttccactccgaccaggagctgttcaacggcgggtcgcaggacgcgctggtgaggaagtacgccggcaacgccggcatgttcgccgccgacttcgccaaggcgatggtgaggatgggcgccctcctgccggcggccgggacgccgaccgaggtccgtctgaactgtaggaaggtcaactaa</cdnaseq>

Protein Sequence

<aaseq>MATQWVLVVVAVMAVLFAGGAAGGQLSTRYYDGKCPNVQSIVRA GMAQAVAAEPRMGASILRMFFHDCFVNGCDASILLDDTANFTGEKNAGPNANSVRGYE VIDAIKTQVEASCNATVSCADILALAARDAVNLLGGPTWTVQLGRRDALTASQSAANG NLPGPGSDLATLVTMFGNKGLSPRDMTALSGAHTLGQARCATFRSRIFGDGNVDAAFA ALRQQACPQSGGDTTLAPIDVQTPDAFDNAYYANLVKKQGLFHSDQELFNGGSQDALV RKYAGNAGMFAADFAKAMVRMGALLPAAGTPTEVRLNCRKVN</aaseq>

Gene Sequence

<dnaseqindica>689..1240#420..611#102..314#tcaagcaaccactggtagtacactgcaaatattcctcttgccgtgtcactggcttgctctgctcgatcacgagcttgaactgtgcttgtgatcagcgagcaatggctactcaatgggtgctcgtggtggttgctgtaatggccgtgctcttcgccggaggcgccgccggcgggcagctgtcgacgaggtactacgacggcaagtgcccgaacgtgcagagcatcgtgagggccgggatggcgcaggccgtggcggcggagccccggatgggcgcctccatcctccgcatgttcttccacgactgcttcgtcaacgtgagatcgcattgcccatcttaattcgccattagtcttgttggggggggagatgtttgtgtttgtgttaatttgtgtgtgcggcttggctgtcgtgtgatgcaggggtgcgacgcgtccatcttgctcgacgacacggccaacttcaccggcgaaaagaacgccgggccgaacgccaactcggtgcgcgggtacgaggtgatcgacgccatcaagacccaggtcgaggcgtcctgcaacgccaccgtctcctgcgccgacatcctcgccctcgccgcgcgcgacgccgtcaacctggtacgctttgacacaagctaacctccaatgcaatccaatcccaatgcagcactttgacacaagctactccgatgcagctgggcgggccgacgtggacggtgcagctgggtcgccgcgacgcgctgacggcgagccagagcgcggcgaacggcaacctgccggggccggggtccgacctcgccacgctcgtcaccatgttcggcaacaaggggctgtcgccgcgggacatgacggcgctgtcgggcgcgcacacgctggggcaggcccggtgcgccacgttccgcagccgcatcttcggcgacggcaacgtcgacgccgccttcgccgcgctccggcagcaggcgtgcccgcagtccggcggcgacacgacgctggcgcccatcgacgtgcagacgcccgacgcgttcgacaacgcctactacgcgaacctggtgaagaagcaggggctgttccactccgaccaggagctgttcaacggcgggtcgcaggacgcgctggtgaggaagtacgccggcaacgccggcatgttcgccgccgacttcgccaaggcgatggtgaggatgggcgccctcctgccggcggccgggacgccgaccgaggtccgtctgaactgtaggaaggtcaactaaagtcaacctgatgacgaacgtgtccaagaactacaagtgtagtgaacagtcaagatggctgtttctgctcctttggatttatttttgtgatctggttaatatttttattatttgtggaattaataatgttgctgtaaacatcttttgatagctgccagtcagtcaatgatcatctgtaagcataaaaaaacgtttgaaaatatgttgcacatgtttttgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0546500, RefSeq:Os06g0546500