BGIOSGA035915

From RiceWiki
Revision as of 18:24, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA035915

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035915, complete gene.

LocusTag

OsI_38936

Ensembl Transcript ID

BGIOSGA035915-TA

Ensembl Protein ID

BGIOSGA035915-PA

Length

2511

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:20166805..20169315

Sequence Coding Region

20169305..20169315,20167305..20167971,20166805..20166957

Genome Context

<gbrowseImage1> name=IndicaChromosome12:20166805..20169315 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:20166805..20169315 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGACGAGACCATCACTCTACAACAATATGTGAATGCAGCACGACAAACCTTTTTGACAGTGGCTCTTCTCCCTGATCAAAACCATTCCCTAGAGATCACACCTGAAGGGTGCCTATTTCTGTTAACTTGGACCAAGTGCTTCACGGAAGCCTTCTCGAAAGGCAAGAGTTGGAATGGGGATTTCACATTGGCAGATTTTAAGGTTTGCCGTGGTCATGTTCAAAAACATAAAAAGCCAAAAAAATTTGGTGATGAGGGAATGAAAAATGATATGGAAAAATTTGTTGAAGAAATAGAGCTTGTCTTTAGAAGCCGGGATAGTCGACTGCGTTTCACATATCCACCTTACTTCAGTGATTTTACATTCCGTCTTAGAAACCTCGAGATAATCCAAAATGTCTTATCTAACCAGTACAAACTACTTCTTGAGACACATATGTGCTTTATGCCATCATATGAGAGAGGTTGCTTCATTATCGGTCTGTATAGAAACTATCAGGGTGGTGATCAAAATGACAAGTGGGAAACTGCGATAAAAACTGCTGTTTGCGCAAGTGGTTGGAAAACCAAAGTGTCCAATGTGGTATTTTTTAAGGACATCGTTACAAAAGCTGAAGAAGATGGAAGGACTTATGGGAAAACCAATTTTGAAGCTTTTAGATTCTCTAGAGACACAAACAATGAGGAAGAAAAGTTTCCGGATGACAGTGGGATTGAATTAATGATACCTTATCACCTAGGAGATTTTATTGCACGGATTGTTGCAAAAGTAATCCTGGATGGAATTGACATCACCGATGAGTATGATTTAAATTTAGCATCTTAA</cdnaseq>

Protein Sequence

<aaseq>MADETITLQQYVNAARQTFLTVALLPDQNHSLEITPEGCLFLLTWTKCFTEAFSKGKSWNGDFTLADFKVCRGHVQKHKKPKKFGDEGMKNDMEKFVEEIELVFRSRDSRLRFTYPPYFSDFTFRLRNLEIIQNVLSNQYKLLLETHMCFMPSYERGCFIIGLYRNYQGGDQNDKWETAIKTAVCASGWKTKVSNVVFFKDIVTKAEEDGRTYGKTNFEAFRFSRDTNNEEEKFPDDSGIELMIPYHLGDFIARIVAKVILDGIDITDEYDLNLAS</aaseq>

Gene Sequence

<dnaseqindica>1..11#1345..2011#2359..2511#ATGGCTGACGAGTAAGTGAACAAGAAACTTCTTCTGATTCCCTTGCTATACATTTCCTAAGCTGTTGGATGTGTTTTTTTTTTCTTTTCTTTAATTCGACGTCAAATGCTGTGGTCAAGTTTTGCGAGCTTTAGTTTGGTGGGATTATTGAGCTTGGTTTCCGTACGCCAATAATGTTTTAGATCTCTCAAAAACACAACTCATGCATGTGCTCACTGCTGTTATATATATTATTTTTTGTGTGGTTTTTTTAACTAAATTAAAAAAAATTAAGACAACATTCATGGAAATTATATATGGTTTTGCTGGAGTGCTTTGGTGATTGTGCAGGCGATCGAGGCAGTTGCACTAAACGGAAAACCATGTTTTTTTGGGGGGACGGAAAAACCATGTTTCAACAAGCACATACTCCTTGTTGGGAATGCGAAACATAGAACCATCGGATACGAAAACCCAAAAGGAACGTCAAGACTCATTCTGTGGCTTGAACTCTTTTGCTTTCAGATAGTACTTCACTATTAGCCTTGATAGGCCCAACAAAACTGGACATCTTTGTTCAGGGCACTCAGGTAAGCTCGCACACTGGAAACAACAATATCCAGTGCGGCACCTCTCCCACTGAGGTCAATAGGCAAAGAAATTATTAGTTGATGAGAAAAATTAAATTGATAATAACAATAATAGATGTTGGAAACATCATAGAAGGAAGGTGCCCAGTGAAAAAAGTATATAAAGGACTATAACCTGAATTCCCGGCTGAAGGAGTGACCAGTCAAAGCATGTTTCGAGTCGCTGACATCTCCAGTGACAACCACTCTAGTACGTAGTAGTTGCAATTGCATCAATGCCTTCTGTTACCGATGTCATGCTATGGAGTATTCTCGAAGAACAGTTGGGATCTGTGAATTGCAAATGATTCTTAGATGTTTCAAAATTTCTCCAGTTTTACTAAAATGAATGCAGATAGTTTACAAATCATGCCAGTAGATGTAGGTAATTTCTCTGTTAACATCAAAATAGTGCACTCATTTTGTTGAAAGCATGCTCATAAGTCGTAACACATCACATGCTAATCCTTATTAAGTACGGAATCTCCTATTCTTGTGATTCTTGTATATTTATCATGGAGGCAACATGCTGCAAGTTATGTTACCAGATGCAGGATGTTTTATTCTTACATATTGAAAAAAACACATCCATATTCCATCCCATTAAACTGGTATACCAGTGCAAGAACCATCAAGAATACTGCAACTGTCACCTGTGCTTAATCACTAGCTTGTGCGAGATTCTTTTTTTCTTTTAAAAAAATGGTTCTTTAAAAAAATGTTTATGTGATTGCAGGACCATCACTCTACAACAATATGTGAATGCAGCACGACAAACCTTTTTGACAGTGGCTCTTCTCCCTGATCAAAACCATTCCCTAGAGATCACACCTGAAGGGTGCCTATTTCTGTTAACTTGGACCAAGTGCTTCACGGAAGCCTTCTCGAAAGGCAAGAGTTGGAATGGGGATTTCACATTGGCAGATTTTAAGGTTTGCCGTGGTCATGTTCAAAAACATAAAAAGCCAAAAAAATTTGGTGATGAGGGAATGAAAAATGATATGGAAAAATTTGTTGAAGAAATAGAGCTTGTCTTTAGAAGCCGGGATAGTCGACTGCGTTTCACATATCCACCTTACTTCAGTGATTTTACATTCCGTCTTAGAAACCTCGAGATAATCCAAAATGTCTTATCTAACCAGTACAAACTACTTCTTGAGACACATATGTGCTTTATGCCATCATATGAGAGAGGTTGCTTCATTATCGGTCTGTATAGAAACTATCAGGGTGGTGATCAAAATGACAAGTGGGAAACTGCGATAAAAACTGCTGTTTGCGCAAGTGGTTGGAAAACCAAAGTGTCCAATGTGGTATTTTTTAAGGACATCGTTACAAAAGCTGAAGAAGATGGAAGGACTTATGGGAAAACCAATTTTGAAGCTTTTAGATTCTCTAGAGACGTAATGACGCATGGTGCAGATCAAGACTATCGATTTGAGGCAAGTTATATAAAGTACTTTTGATTTAATGTTTTACGTGTACTTTGACTTTTTGAATTAACCAATGGATCGGAGTATCTCATTAAGTAATCATGCATGGTCCAATCTAGTATTTGATTATTTCATTCTTATGAAATGTTGTGCACCATCTTTTGAAGGATACATTGTATAGTTACAAAACAAATCTTAATATTAGACAATAATAATTAAGGGACTTGATCGAATTCGACAAATCAAATAGTTTGGGTTTATTATTTATTATTTTAATTTGTTTGCTTCTTTTTTTTTTCTTTTTTTCCTTTTTGCAGACAAACAATGAGGAAGAAAAGTTTCCGGATGACAGTGGGATTGAATTAATGATACCTTATCACCTAGGAGATTTTATTGCACGGATTGTTGCAAAAGTAATCCTGGATGGAATTGACATCACCGATGAGTATGATTTAAATTTAGCATCTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035915