Os06g0547100

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Revision as of 09:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0547100| Description = Similar to Class III peroxidase GvPx2b (Fragment)| Version = NM_001064356.2 GI:297605990 GeneID:4341248| Length = 21...")
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Gene Name

Os06g0547100

Description

Similar to Class III peroxidase GvPx2b (Fragment)

Version

NM_001064356.2 GI:297605990 GeneID:4341248

Length

2148 bp

Definition

Oryza sativa Japonica Group Os06g0547100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:21566601..21568748

Sequence Coding Region

21566601..21566687,21567588..21568133,21568223..21568414,21568512..21568748

Expression

GEO Profiles:Os06g0547100

Genome Context

<gbrowseImage1> name=NC_008399:21566601..21568748 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:21566601..21568748 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtttcttgtttgccaggagcagcggctacagctttgttgctcttgccctcctggcgtgcgtgctgctggcgccgtgccaggcggcgaaggcggggctctcgatcaagttctacgccaagacgtgccccggcgtggacaccatcgtgcggtcggtggtggcgcaggccgtcgccaaggagccccggatgggcgcctccatcatccgcctcttcttccacgactgcttcgtcaacgggtgcgacgcgtccatcctcctcgacgacacgctgacgttcacaggcgagaagaacgccggcgccaacatcaactccgtgcgcgggtacgaggtcatcgacgccatcaagtcccaggtcgaggcggcctgcaagggcgtcgtctcctgcgccgatatcgtcgcgctggcgtctcgcgacgccgtaaacttgctcgggggaccgacgtggaacgtgcagctgggcaggaaggactcgcgcacggcgagcgggaccgcggcgaacgccaacctgcccggcccggcgtccagcggggcgtcgctcgtggcagcgttcgcggggaagggcctctcggcgcgcgagatgacggcgctgtccggggcgcacaccgtggggcgggcgcgctgcctcatgttccgcggccgcatctacggggaggccaacatcaacgccacgttcgccgccgcgctgcggcagacgtgcccgcagtccggcggcggcgacggcaacctagcgccgttcgacgaccagacgcccgacgcgttcgacaacgcctacttcaagaacctggtggcgcagcgcggcctgctgcactccgaccaggagctgttcaacggcgggtcgcaggacgcgctggtgaggaagtacgccgggaacgccggcatgttcgccggcgacttcgccaaggcgatggtgaagatgggcggcctcatgccggcggccgggacgccgacggaggtcaggctgaactgccggaagagcaaatacaacactgggcgccttacaatcaacctatatcacatttttgtacacgtggagcttaaaggcaaaaggacaggagagtga</cdnaseq>

Protein Sequence

<aaseq>MGFLFARSSGYSFVALALLACVLLAPCQAAKAGLSIKFYAKTCP GVDTIVRSVVAQAVAKEPRMGASIIRLFFHDCFVNGCDASILLDDTLTFTGEKNAGAN INSVRGYEVIDAIKSQVEAACKGVVSCADIVALASRDAVNLLGGPTWNVQLGRKDSRT ASGTAANANLPGPASSGASLVAAFAGKGLSAREMTALSGAHTVGRARCLMFRGRIYGE ANINATFAAALRQTCPQSGGGDGNLAPFDDQTPDAFDNAYFKNLVAQRGLLHSDQELF NGGSQDALVRKYAGNAGMFAGDFAKAMVKMGGLMPAAGTPTEVRLNCRKSKYNTGRLT INLYHIFVHVELKGKRTGE</aaseq>

Gene Sequence

<dnaseqindica>2062..2148#616..1161#335..526#1..237#atgggtttcttgtttgccaggagcagcggctacagctttgttgctcttgccctcctggcgtgcgtgctgctggcgccgtgccaggcggcgaaggcggggctctcgatcaagttctacgccaagacgtgccccggcgtggacaccatcgtgcggtcggtggtggcgcaggccgtcgccaaggagccccggatgggcgcctccatcatccgcctcttcttccacgactgcttcgtcaacgtacgtcagtcgtcgcgtttgttctgatgatgatctctagctgacgagatggtcgagtcacgctcacgcgtgcgttacgtttttttggcgaatgcaggggtgcgacgcgtccatcctcctcgacgacacgctgacgttcacaggcgagaagaacgccggcgccaacatcaactccgtgcgcgggtacgaggtcatcgacgccatcaagtcccaggtcgaggcggcctgcaagggcgtcgtctcctgcgccgatatcgtcgcgctggcgtctcgcgacgccgtaaacttggtcagtgaacacacgagacgagtgtgtgtagacgtcatagtgacacagtgcacattgaataatcttgattgcaataatctgcgttgcagctcgggggaccgacgtggaacgtgcagctgggcaggaaggactcgcgcacggcgagcgggaccgcggcgaacgccaacctgcccggcccggcgtccagcggggcgtcgctcgtggcagcgttcgcggggaagggcctctcggcgcgcgagatgacggcgctgtccggggcgcacaccgtggggcgggcgcgctgcctcatgttccgcggccgcatctacggggaggccaacatcaacgccacgttcgccgccgcgctgcggcagacgtgcccgcagtccggcggcggcgacggcaacctagcgccgttcgacgaccagacgcccgacgcgttcgacaacgcctacttcaagaacctggtggcgcagcgcggcctgctgcactccgaccaggagctgttcaacggcgggtcgcaggacgcgctggtgaggaagtacgccgggaacgccggcatgttcgccggcgacttcgccaaggcgatggtgaagatgggcggcctcatgccggcggccgggacgccgacggaggtcaggctgaactgccggaaggtgaactaagattaatggcgtttacgtgggtgtacgtcatgatcattcgtagctaagatcatatatccaatcgagaatttccctttgtgggattgtgatggagacgtgcatgtaggatatgaccaattttattatcctcatttggtaagcaatgccctgctaatcggcgcggcaatattcatacagaatttgctttggaatgcttgaatcttttaggaactttgttaacaaaatatttcagcaatataattaacgggttattgtgatattgacgttgactttgtgaaataatataagtttgagatattgagaaaacctgagcaacacatgctcatcagagctagtacgtctccactccccacttaacgctgacatgttctcggtatttcgaatttcttcccatttttccattctctgtccagaagtacaaaagtcacaatatgccaatagataaaatctatttaatcacaaaagtgatataattcttgcaaattgccccttccaaatttattttacatgatgatcaggataaatgtatgtcaactgtgcacacattgactactttttttaatttagtttactctttgtatccttagcatatttttctcagaaaagtatatacatacaatattcttacaaacactaatatgtgatcaagtgagtaaatctagattttttgtaactatcatctagttaaatagaagggttagaagctttgtttgtaaaagttatgtaatagttttttaatatgtgcagtggtgctcattttcctcttaatttgcaagtgtttggagggttgcttttcatcttaccacaaaagatggagaaggtacatactcctttaaattattttttgtttgatgatgcacatgtggagttgaatacaagtgctgtttttagagcaaatacaacactgggcgccttacaatcaacctatatcacatttttgtacacgtggagcttaaaggcaaaaggacaggagagtga</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0547100, RefSeq:Os06g0547100