Os06g0548100

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Revision as of 09:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0548100| Description = Similar to Nectarin 5 (Fragment)| Version = NM_001064361.2 GI:297605992 GeneID:4341253| Length = 1736 bp| Definitio...")
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Gene Name

Os06g0548100

Description

Similar to Nectarin 5 (Fragment)

Version

NM_001064361.2 GI:297605992 GeneID:4341253

Length

1736 bp

Definition

Oryza sativa Japonica Group Os06g0548100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:21612928..21614663

Sequence Coding Region

21613046..21614653

Expression

GEO Profiles:Os06g0548100

Genome Context

<gbrowseImage1> name=NC_008399:21612928..21614663 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:21612928..21614663 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcaacgacgccaacggcagcatcgcgccggctcgtcctgatcctctgcaccctcgctatctcctgcagcagcggcatcgccggattcgccgccggcgatgacgacgcgttcatccgctgcctcgccgccgccgctgtcccgccacggctggtccacaccccgggctccgcgtcctacgccccgacgctcgtctcctccatccggaacctccgcttcgtcacgccggggacgccgaggccgctcgccatcgtcgcggccgccgaggcgggccacgcccaggccgcggtgcggtgcggccggcgccacggggtccgcgtccgcgcgcgcagcggcgggcacgactacgagggcctctcctacctctccctcgaccgccgcgagcggttcgcggtgctcgacctcgccgcgctccgcgacgtccgcgtggacgccgatcgcgccgaggcgtgggtcgggtcgggcgccacgctcggcgagctctactacgcggtgggcgccgcgagccgcactctcgcgttcccggccggtgtctgcccgaccgtcggcgtcgggggccacatcagcggcgggggattcggcacgctgatgcgcaggtacggcctcgccgcggacaacgtcctcgacgccgtcctcgtggacgccgacggccggctcctgaacaggaccaccatgggggagggcctcttctgggcaatcaggggcggcggcggcgagagcttcggcgtcgtgctgtcctggaagctgcggctggtccgcgtcccggagacggtcaccgtgttcaccatccgccgcccgagaaaccaatccgccaccgacctcatcaccaaatggcaagagatctccccctcactgccccgagacgtcatcctccgcgtcgtcgtgcagagccagcacgcgcagttcgagtccctgttcctcggccggtgccgccgcctcgcccgcctcatgcgagctcgcttcccggagctcgggatgacgcagtccgactgcgaggagatcacctggatccaatccaccgtctacttcgccttctactccagctccaagccactggagctcctcctggacaggggcaccgagccggacagatacttcaaggccaaatccgactacgtccaagaacccatcccacgccacgcctgggagagcacatggccatggctggaggagcacgacgccgggctgctcatcctcgacccctacggcggcgagatggcccgcgtctcgccggcggcgacgccgttcccgcaccggaagggcaacctgtacaacctccagtactactcgttctggttcgagcacggagcagagacattggagaggcatctgagctgggtcagggggctgtatggcgagatggagccgtacgtgtccaagaacccaagaactgggtatgtcaactacagggacatggatcttgggaggaatgagatcgaggggaatgtgacgagctacacgaagggtaaggtttggggggagaagtatttcaggggcaatttcgagaggttggcggcggtgaaggccatggttgatcctgatgatttcttcaggaatgagcagagtattcctcctcttcctgctgcaaaggggtggagctccatttaa</cdnaseq>

Protein Sequence

<aaseq>MSTTPTAASRRLVLILCTLAISCSSGIAGFAAGDDDAFIRCLAA AAVPPRLVHTPGSASYAPTLVSSIRNLRFVTPGTPRPLAIVAAAEAGHAQAAVRCGRR HGVRVRARSGGHDYEGLSYLSLDRRERFAVLDLAALRDVRVDADRAEAWVGSGATLGE LYYAVGAASRTLAFPAGVCPTVGVGGHISGGGFGTLMRRYGLAADNVLDAVLVDADGR LLNRTTMGEGLFWAIRGGGGESFGVVLSWKLRLVRVPETVTVFTIRRPRNQSATDLIT KWQEISPSLPRDVILRVVVQSQHAQFESLFLGRCRRLARLMRARFPELGMTQSDCEEI TWIQSTVYFAFYSSSKPLELLLDRGTEPDRYFKAKSDYVQEPIPRHAWESTWPWLEEH DAGLLILDPYGGEMARVSPAATPFPHRKGNLYNLQYYSFWFEHGAETLERHLSWVRGL YGEMEPYVSKNPRTGYVNYRDMDLGRNEIEGNVTSYTKGKVWGEKYFRGNFERLAAVK AMVDPDDFFRNEQSIPPLPAAKGWSSI</aaseq>

Gene Sequence

<dnaseqindica>11..1618#ggaatcgatcatgtcaacgacgccaacggcagcatcgcgccggctcgtcctgatcctctgcaccctcgctatctcctgcagcagcggcatcgccggattcgccgccggcgatgacgacgcgttcatccgctgcctcgccgccgccgctgtcccgccacggctggtccacaccccgggctccgcgtcctacgccccgacgctcgtctcctccatccggaacctccgcttcgtcacgccggggacgccgaggccgctcgccatcgtcgcggccgccgaggcgggccacgcccaggccgcggtgcggtgcggccggcgccacggggtccgcgtccgcgcgcgcagcggcgggcacgactacgagggcctctcctacctctccctcgaccgccgcgagcggttcgcggtgctcgacctcgccgcgctccgcgacgtccgcgtggacgccgatcgcgccgaggcgtgggtcgggtcgggcgccacgctcggcgagctctactacgcggtgggcgccgcgagccgcactctcgcgttcccggccggtgtctgcccgaccgtcggcgtcgggggccacatcagcggcgggggattcggcacgctgatgcgcaggtacggcctcgccgcggacaacgtcctcgacgccgtcctcgtggacgccgacggccggctcctgaacaggaccaccatgggggagggcctcttctgggcaatcaggggcggcggcggcgagagcttcggcgtcgtgctgtcctggaagctgcggctggtccgcgtcccggagacggtcaccgtgttcaccatccgccgcccgagaaaccaatccgccaccgacctcatcaccaaatggcaagagatctccccctcactgccccgagacgtcatcctccgcgtcgtcgtgcagagccagcacgcgcagttcgagtccctgttcctcggccggtgccgccgcctcgcccgcctcatgcgagctcgcttcccggagctcgggatgacgcagtccgactgcgaggagatcacctggatccaatccaccgtctacttcgccttctactccagctccaagccactggagctcctcctggacaggggcaccgagccggacagatacttcaaggccaaatccgactacgtccaagaacccatcccacgccacgcctgggagagcacatggccatggctggaggagcacgacgccgggctgctcatcctcgacccctacggcggcgagatggcccgcgtctcgccggcggcgacgccgttcccgcaccggaagggcaacctgtacaacctccagtactactcgttctggttcgagcacggagcagagacattggagaggcatctgagctgggtcagggggctgtatggcgagatggagccgtacgtgtccaagaacccaagaactgggtatgtcaactacagggacatggatcttgggaggaatgagatcgaggggaatgtgacgagctacacgaagggtaaggtttggggggagaagtatttcaggggcaatttcgagaggttggcggcggtgaaggccatggttgatcctgatgatttcttcaggaatgagcagagtattcctcctcttcctgctgcaaaggggtggagctccatttaactggagtattgtttctttgcttgagaaatttttggtaatgtgtgtgtttcgttcttgggaaatttatttcttagtggtacaagtgatgatgcaattgagatgggatactttgcagacc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0548100, RefSeq:Os06g0548100