Os06g0548600

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Gene Name

Os06g0548600

Description

RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein

Version

NM_001187915.1 GI:297724960 GeneID:9269199

Length

1419 bp

Definition

Oryza sativa Japonica Group Os06g0548600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:21640726..21642144

Sequence Coding Region

21640726..21641084,21641535..21642144

Expression

GEO Profiles:Os06g0548600

Genome Context

<gbrowseImage1> name=NC_008399:21640726..21642144 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:21640726..21642144 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagcatgggccacaagcatcctttcttaccgcccctactctctccctcctttgttttctctccatctctgtcccagtgaagcaagatgaggcgaccttcgcaatttcttgtatagccatcgacggctgctccttcactgagctaatcattgtctacccatggtcattaccgtcagtagctatcccgtgccccatcatcgctctgcactatcgctatgcctcagcgataggtaaatgcggagggatcccagagcctatgccgctaatggttgctcgtcgtggtggcacctatccccatagctcagtgcctcagtcaactggaggggcaacgacaatggtgctgcaaacagagcgaagaaaagtgaatgggaagctaggtccctactttaggacttctagaggtctgaggcaaggggatccctggtcccctttcctcttcaatcttgtaggtgatgctttgtctgttattctggaagaggctgtaagaaatggggtgctgggaggcattgttcctcatttagttgaaggggggctttctcatatgcagtatgcagatgataccattctctttactaccattgaggagggggacatcttggctttaaaattcctacttttctgttttgaagaaatgacaggaatgaagataaactatcagaaaagtgaggtttatgtcctaggggttgagaaagaagaggaactgaggattgctgatatattaaattgtaaagtgggggagatgtcttttgtttaccttggtttgtctatgggagtcgacaagctcaagaagaaggatcttattcctgccatgcaaaaggctagaaaaagacttgagtcttggcatagtggtcacctctcttttgggggagggagatcaggattaattcctgtctcacaagcattcctttatattacatgggctttttctatttacctggttactttcataagaaaatggacagtttga</cdnaseq>

Protein Sequence

<aaseq>MQHGPQASFLTAPTLSLLCFLSISVPVKQDEATFAISCIAIDGC SFTELIIVYPWSLPSVAIPCPIIALHYRYASAIGKCGGIPEPMPLMVARRGGTYPHSS VPQSTGGATTMVLQTERRKVNGKLGPYFRTSRGLRQGDPWSPFLFNLVGDALSVILEE AVRNGVLGGIVPHLVEGGLSHMQYADDTILFTTIEEGDILALKFLLFCFEEMTGMKIN YQKSEVYVLGVEKEEELRIADILNCKVGEMSFVYLGLSMGVDKLKKKDLIPAMQKARK RLESWHSGHLSFGGGRSGLIPVSQAFLYITWAFSIYLVTFIRKWTV</aaseq>

Gene Sequence

<dnaseqindica>1..359#810..1419#atgcagcatgggccacaagcatcctttcttaccgcccctactctctccctcctttgttttctctccatctctgtcccagtgaagcaagatgaggcgaccttcgcaatttcttgtatagccatcgacggctgctccttcactgagctaatcattgtctacccatggtcattaccgtcagtagctatcccgtgccccatcatcgctctgcactatcgctatgcctcagcgataggtaaatgcggagggatcccagagcctatgccgctaatggttgctcgtcgtggtggcacctatccccatagctcagtgcctcagtcaactggaggggcaacgacaatggtgctgcaaacagagcgaaggttcgtgaggacgatcatggcggtcaggtttcctcatgtgtttggccatcatgcttgccacttccatcaccatcagacttggcatggtgcttctgcacattgctcaacaaggctgtggcaaagctcaagaactacgagtaacctgttacgccaaagctcggctgggcctagcacattctcgtcacgacatggaggtggcggtgtggaggcgagaaagaaaaggattgcgcatcaaaggaggcggccaagggagagacaaagaggatccctctcaagcctagagcatggactaaaaataggttacaatttttatttaattgcataccaattaggattcaaactcttgacatggctctaacagtggcggagccagcccggtcgatgaagtttagtttttcgttgttagaaacatttaataattatcttcactaatcaacaactgatatacagaaaagtgaatgggaagctaggtccctactttaggacttctagaggtctgaggcaaggggatccctggtcccctttcctcttcaatcttgtaggtgatgctttgtctgttattctggaagaggctgtaagaaatggggtgctgggaggcattgttcctcatttagttgaaggggggctttctcatatgcagtatgcagatgataccattctctttactaccattgaggagggggacatcttggctttaaaattcctacttttctgttttgaagaaatgacaggaatgaagataaactatcagaaaagtgaggtttatgtcctaggggttgagaaagaagaggaactgaggattgctgatatattaaattgtaaagtgggggagatgtcttttgtttaccttggtttgtctatgggagtcgacaagctcaagaagaaggatcttattcctgccatgcaaaaggctagaaaaagacttgagtcttggcatagtggtcacctctcttttgggggagggagatcaggattaattcctgtctcacaagcattcctttatattacatgggctttttctatttacctggttactttcataagaaaatggacagtttga</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0548600, RefSeq:Os06g0548600