Os06g0550000

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Revision as of 09:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0550000| Description = Similar to 60S ribosomal protein L11-2 (L16). Splice isoform 2| Version = NM_001064369.2 GI:297606000 GeneID:4341262|...")
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Gene Name

Os06g0550000

Description

Similar to 60S ribosomal protein L11-2 (L16). Splice isoform 2

Version

NM_001064369.2 GI:297606000 GeneID:4341262

Length

2621 bp

Definition

Oryza sativa Japonica Group Os06g0550000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:21728114..21730734

Sequence Coding Region

21728303..21728501,21729345..21729540,21729628..21729670,21730455..21730562,21730671..21730673

Expression

GEO Profiles:Os06g0550000

Genome Context

<gbrowseImage1> name=NC_008399:21728114..21730734 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:21728114..21730734 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcggagaagaagcagtccaacccaatgagggagatcaaggtgcagaagctggtgctcaacatctccgtcggggagagcggagatcgcctcacccgtgcctccaaggtcttggagcaactgagtgggcagtcaccagtgttctctaaggctagatacaccgttcgctcatttggcatcaggcgtaatgagaagattgcgtgctatgtaactgttaggggtgagaaggcaatgcagcttcttgagagtggactgaaggtgaaggaatatgaacttctgagaagaaacttcagtgaaactgggtgttttggttttggaatccaggagcacattgatcttggcatcaagtatgatccttcaacaggtatttatggcatggacttctatgttgtccttgagcgtgctggataccgtgttgctcgccgtcgcaggtgcaagtcccgtgttggcattcagcaccgggtgaccaaggaggatgccatgaagtggttccaggtcaagtacgaaggtgttatcctcaacaaggcccaggctaatacatcttaa</cdnaseq>

Protein Sequence

<aaseq>MASEKKQSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSG QSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETG CFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKED AMKWFQVKYEGVILNKAQANTS</aaseq>

Gene Sequence

<dnaseqindica>2234..2432#1195..1390#1065..1107#173..280#62..64#ggcagccgcgactcctcccctaccgccgccctccctcgccgccgcgacgtcaccgtctgccatggtaagcgcactctcagctcctcctctcgtcaccaacctgatgggttccccatgaggcttaccctctgcggcgcggtgtggctgcccacacgcgtgtgtgctgtcgcaggcgtcggagaagaagcagtccaacccaatgagggagatcaaggtgcagaagctggtgctcaacatctccgtcggggagagcggagatcgcctcacccgtgcctccaaggtttggccaggcttctttttttattttttttattttttcggtgtaccattagcgtttaggttgtagatgtccgagtaggaaatgagcttttgcttagttacaatgtgatgcattgtgttagcttgatatcttgcttcgatgatttgagatagtggtgtttgcttcgatgatttgagatagtggtgtgaactcgctaataattggtgattatgactgtaagttatctttcttagcggaaccgtgcaaggatgaaattgcggctaggggaatactagaatgatgcttttaaattgccattcaactaagtgataatctatttgcctggctgctttaacgtcagtgttcagttgtgcagacttcagataagtatcctgacgtctgctttatggtcgcaggataatttgttgaatttttttcccccagtagaatcgttgatcattgaccatagaactagaattcaaagctggatgattcggattgcagttatataaaattcatgagacaatgacattattatgtttgtgtaaaaaatagctaatggaactaaaaggtgacgactgtttgtctctttcaaggttgtgtggcaaaaggaaaatagttctgaactactgtttgttcttatcctggtcatatcctaatctctaattgtgaacaattgttttaattccgaattgctgaaaggtcaagaatgacacatcgctgttttaggtatctgttgctattgttaatgccaaactgttaaattaagttaacgccagttaatatattttccatgtactttcaggtcttggagcaactgagtgggcagtcaccagtgttctctaagggtagacattcctttcttgtctgctagttttattgtcttgttcatgacaactttgttgacagttgttttggttgtccactttcttcagctagatacaccgttcgctcatttggcatcaggcgtaatgagaagattgcgtgctatgtaactgttaggggtgagaaggcaatgcagcttcttgagagtggactgaaggtgaaggaatatgaacttctgagaagaaacttcagtgaaactgggtgttttggttttggaatccaggagcacattgatcttggcatcaagtaagattttcaacctgtgttgttcataattaacttcgaaatttactgaaataatgagagtacaactttgggtatagtgtagctttgatgtctttggttggcaatataggatttctgtagtcccatcatgttttccttttgtatgtctttccatgatactatttgatagtccatctatatttgaaactctaaattgttttctccttgtccactaggactacattcatctacttataccattcgcttccacaattttatggttgtagcttatattagtaacagtgggccaatgacttgaattaattgtccgtaccatctgaagcttggcatttgctggtttattgatgtaccttttcttctgaggcctaaactgttatcatttacaattatatttccatgatgaactgacatcaacagctggatattgtaatttaagtgttattcatatacatattgttatttgtgatattctttttcttgactgagcacaattgcagttctcgctctgctgagtcttgactactatggttttgtgcattcacatttcacatcctgaacaagatttcatgctatctatcatactttttaatcaccactacctagtaaaatatagaaatgatttgatataaataacaacttttgttttcgtttattaattgcgatatactccctgtttatatccttgattattgtgcattttaagcattccttgtcatgatgaatccatactaatagtgaaactttctaccttcgacataagggcatattcctttctttattatcttttgattactgttgtatgccacagctgaacatttattatctttgtgttttcttgtgcaggtatgatccttcaacaggtatttatggcatggacttctatgttgtccttgagcgtgctggataccgtgttgctcgccgtcgcaggtgcaagtcccgtgttggcattcagcaccgggtgaccaaggaggatgccatgaagtggttccaggtcaagtacgaaggtgttatcctcaacaaggcccaggctaatacatcttaagacctgatttgataggttttaggtccagtcactgcttgttatgagcgcagacaagtttttatttcacctaatgcaatgccggagtatattattttgccaagtcgttttgtttgagttcgttttgcacttgggagcgtataacgccggtcacttgaaaaaagaaaaatccgaaatcatgtcttgcctttc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0550000, RefSeq:Os06g0550000