Os09g0510900

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Revision as of 07:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0510900| Description = Leucine-rich repeat 2 containing protein| Version = NM_001189004.1 GI:297727138 GeneID:9268345| Length = 4485 bp| D...")
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Gene Name

Os09g0510900

Description

Leucine-rich repeat 2 containing protein

Version

NM_001189004.1 GI:297727138 GeneID:9268345

Length

4485 bp

Definition

Oryza sativa Japonica Group Os09g0510900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20507765..20512249

Sequence Coding Region

20508641..20509519

Expression

GEO Profiles:Os09g0510900

Genome Context

<gbrowseImage1> name=NC_008402:20507765..20512249 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:20507765..20512249 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggttcactcatgcttgtgcatgcaggaaatgtggcagcatatacattcccttatgccaatgaaagacgctgcccgtgctgcctgcttgtcttctgcctttctatactcatggagaaaccgtcccaaactctcctttagtactgaaacgatgggtatcgttgaaggtacaacggatttcatcagaaaaattgatcgcgttatggaaaaacactcaggcattggtgtgaaggctcttacgattgagttcaatggtctcttcagtaccaaagcacgcagttacctcgaaagatggcttcaaattgctgttacaccaaggatcgaagagctcagcctctcgatgtccaagggaaaagcatattatgactttccttgctcacttctatctgatgggagtggaagctcgattcggcttcttgatctttactgctgtacctttcaccccactgcggagattggttgctttcaaagcttgacgaggctgcatctggagtatgtgagaatcacgggggatgaattggggtgcgttttttccgcttcgtttgctttggagtggttgaaactccggctttgccgtcatataaaatacatgaagttgccttgtgtgctacagcggctgacctatgtggaagtgcgtggatgctccaggctgcgagtaatagagaacaaagctccaaaccttcacagtttgcacattttttatcaagcttatcaccctatacaactctcctttggagagtcatctctggtgaagaacctaagtattgggtattcctctgttctcaatcatgcttgcgcggagctaccatatatttttccaaacctcgaaactcttaccatacgctcattgggtgaggtatgctttctcggtggctcttaa</cdnaseq>

Protein Sequence

<aaseq>MVHSCLCMQEMWQHIHSLMPMKDAARAACLSSAFLYSWRNRPKL SFSTETMGIVEGTTDFIRKIDRVMEKHSGIGVKALTIEFNGLFSTKARSYLERWLQIA VTPRIEELSLSMSKGKAYYDFPCSLLSDGSGSSIRLLDLYCCTFHPTAEIGCFQSLTR LHLEYVRITGDELGCVFSASFALEWLKLRLCRHIKYMKLPCVLQRLTYVEVRGCSRLR VIENKAPNLHSLHIFYQAYHPIQLSFGESSLVKNLSIGYSSVLNHACAELPYIFPNLE TLTIRSLGEVCFLGGS</aaseq>

Gene Sequence

<dnaseqindica>2731..3609#gagaggtccccacttcgccgtgatcctctccaatccaccggcgactccgacgagctggtagcattagcgcctcgactttgagccgccgtcggcctccgctccggtgggtcacggggccgcatggatggagtaatcgagcccagagaagcgggtcgtcggcgtcatcccccgccattccacgacgcggcgatctcatcggccgccgcctgcatcgagggaaagtgggaaacccctcaacgggcaccctggatggctgctgcggcggcgtagggcgcggccgccatcgacgcatgcatccggtcggagaggaacctggctggcgtccccgccccgccgcccgccgccgccgcagcacccgcctccagcgacacacacaccgccgcggggcgctccgctcgtctcacccacccggcgcagagcggcgccgcgaggggcgagagcgagcgcgcgctacccgcgtgcacgcggcggcggtcgcaggccgcagaacctcgcggcgtccgcccgcgtcattctccggttctcccctacggtcggcaagctcgacgcgggtttccatggagcccgcccaggtgctcgcgaatcgccatggtctccatggagcttggcgctggagactcagatattcaaccgcgaattcaggaatcctaattccgatttctccctaaattgggaggcccattgctgagaaataatctcgctcggcggcgcctatgtggtctctctccctcgttttccttcacaagatacagattccgagagcaaataagtaggagactaaaacggaagtcgacgccggtttcctcgattcgtggacggacgagcaatcgtgggttcgtggtcatgggattggggtatgtgctgctgaagcgcttgcagcgagagcgtcgtcgtcgtcgtcgtagtcgacatgccctagttcccggtaagtcgccttttcctgtctcagcttgtctgctctgctattcatgtgaggatgcaatgagttctgccattcatgtgacaatgcaaattattcatgccggcctcattgttatgcttatgcttataagccaaaaattgaatttaggacttaattttaatgttgatttttttttcatcttagtttatttgacaacatttgcttttgagttgctaaggacacgaatataaaagttttattcacaaatgattttttatttgctaataagcgattcggataagcatatgaataagctaaacaatggggtttctcatctattgcttgctcagagaatgtacttcagcattgtgcagcaagactcggatttcgattttgtagtttcctctctcttttgcgagtaggtgaaactgattcgtttagattgttagttcaattgttagtttcaatccgtatgatctttttgcaagtacctctttatgtttgagattcctttagattgttagtttcgaccatatgatctttttgcgaatacatttttatgtttgagcaggtaagttctccggttgagcacatgagctcccgtttacccccagtctgcatctgttcataaaagagattgtaattaagaagaccaaataatgatgcttatctactaaaggttttgagagtaggaatcagcatccactcaaacactagaccaagcatgtattgtttgcatcataatgcttaatttcttgtttctcctgttgacgcatgtactatattcttaacctttagttgttgcagatgagtctattgcctcaccagagaaacgaaagggctcatgttatcaacaagatgacagtcctcgcagtggcaaaaagatgagatattcaggtccataccttcctgaggtatgacacacagtcctggtagtggaagactaacagagttacagtgcaaatagtgcgtaaaagttggtgtaactattccaactaaaacagaaatttgcgtacatatttcactttgtttatttttgtactcgtcatagactcatagatgtaccaagtatgtcttgttcgactgcggtaattgcagatgacatcatgcttacctgctgataaccttgactaaaacaaatgtcttgtatctggcccattctacctgcagaatctccttccatgggtacttaatgctggaaaataaacctatcattatattgtcaccaaatagtaacttgtttggaataggggtatgaccgtatgatttaaatcagagtcatgggaagcacacaaattcagactgctgtattacactggtttgttttggtatcttaggataactattacactgttgaactttatggaaaaacgtatcagtgcttcctccgcacatgtttacttggttcacactttctattagaacattgatttcatgttatccttcctaattcttatacaagtggtggataggattgatccacatattattttaggaccacaatcatttgtcaagtatgttgcctaagtcatgttgcaacttgcaatcaggggaggaaacagggggaggcgagcagtggcttggcctcccccatgcattcaaatttcacagtattttttactgtagctttagcaaattttgaaaaaaattaacactattggccccctccaacataatgtttttaaggtttttggctgtgtcttgcaataccatccatagcagtaaaatgtatacaagctagtaataactaatagcccttctctacacaatgctcaatttaactaccgcagttacaatccagttgttttagccttcaagtttccaatgtaatggttcactcatgcttgtgcatgcaggaaatgtggcagcatatacattcccttatgccaatgaaagacgctgcccgtgctgcctgcttgtcttctgcctttctatactcatggagaaaccgtcccaaactctcctttagtactgaaacgatgggtatcgttgaaggtacaacggatttcatcagaaaaattgatcgcgttatggaaaaacactcaggcattggtgtgaaggctcttacgattgagttcaatggtctcttcagtaccaaagcacgcagttacctcgaaagatggcttcaaattgctgttacaccaaggatcgaagagctcagcctctcgatgtccaagggaaaagcatattatgactttccttgctcacttctatctgatgggagtggaagctcgattcggcttcttgatctttactgctgtacctttcaccccactgcggagattggttgctttcaaagcttgacgaggctgcatctggagtatgtgagaatcacgggggatgaattggggtgcgttttttccgcttcgtttgctttggagtggttgaaactccggctttgccgtcatataaaatacatgaagttgccttgtgtgctacagcggctgacctatgtggaagtgcgtggatgctccaggctgcgagtaatagagaacaaagctccaaaccttcacagtttgcacattttttatcaagcttatcaccctatacaactctcctttggagagtcatctctggtgaagaacctaagtattgggtattcctctgttctcaatcatgcttgcgcggagctaccatatatttttccaaacctcgaaactcttaccatacgctcattgggtgaggtatgctttctcggtggctcttaaactttttttttatatttatgttcacacatttgaacatggtatttagtcaatctgaagcatctttctgcagatggtcagtacaccaatggtgcctaacacattcctccatctcaagtacttgtgtattactctttctgcagtaactctctctccatcatatgattatttgtctctggtttcctttctcgatgcctgcccttccttggacactttcatcgtggatgtaagccacaccttcaccctgtaaacttgtctagttactactttctggaaccaattaattcaactataatggacttgtcattttcaggtatccgcaaaacacccagagaacgattcaattttcgagaacccctcacatctaaggcagttgccagagcaacgccatgacaacctccggaatgtgaagatcactggattccgctccgtgaagagcttgttggagctaacatatcatatcctcgagaatacatcagtcgaatgtcttacattggacaccagttttgagtctttcagatgttctcccggcaaacttggtagatgctcgcgaatgccaaaggatgatctcatggaagcctctaaagcactcttcgctatcagaacatacatcgagggaaaagttccctccacggttagactaaatgtggttgagccttgcagccgttgccatgttatggaaccttttactgtcgaaactcgaaagtaacagcggaaatgaaatgcagtaacacaacactcatgtttttctttgcgtgcatcatgtagtaactgcgtttctctgtgcactgtactactgtatgtgcatgttggagtgctgaacttgccccttgtcaccaggatgcagaataatagttgcctcgttcatcataatcattc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0510900, RefSeq:Os09g0510900