Os06g0555500

From RiceWiki
Revision as of 09:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0555500| Description = Initiator tRNA phosphoribosyl transferase family protein| Version = NM_001064387.1 GI:115468505 GeneID:4341283| Leng...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0555500

Description

Initiator tRNA phosphoribosyl transferase family protein

Version

NM_001064387.1 GI:115468505 GeneID:4341283

Length

3932 bp

Definition

Oryza sativa Japonica Group Os06g0555500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:22044586..22048517

Sequence Coding Region

22044944..22045119,22045377..22045436,22045574..22045682,22045761..22045864,22046210..22046924
,22047403..22047542,22048165..22048495

Expression

GEO Profiles:Os06g0555500

Genome Context

<gbrowseImage1> name=NC_008399:22044586..22048517 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:22044586..22048517 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcggcgtcgtcggagtcagcggatgccgccgccgctgggccgtcgacgctgagcatctacaaggcggcgcggcgcatcaagcggcgggagagcacgctgtacaacgcgctgcggagcgtggcggacgacgccgcgttcgtggcggagatcgcggcgctgtggccggcgctgccgctggtcgccaacctccgctgcgggctctggtacttgccgccccgcgccgtcgccgccacctgctacttcaagtccaccgatgggcacgcgggcaactgggccttctccaccgcccgcctcaacctccacctcgccctcctcgctggggagagaggagggtgcataattgttgattcaacaaggagagggaaacgtttccctgacagcatgtcaaagaccatacccatttggtgttgtgtcctcaaccgagcaattgagaggtatcggctgcagactaacaacaagtcagctgctgtagccaacaaagacgctgaaaagatctctgaatcatcaaactgggataactcagtgcatcttcctgtatgggttctagagactgagaaaaatgctatagaggggcgtatcgaggaatggacaacccaatttgaatcatgtggtgcagacattcgttctcttgcgttaagtttgaagaaaccactacgtccattgtggatatcacaaaggacacggatatggttaaatgaagttccagagcttgaatcatgggatttcacccctatcatattagtttcagcatctgcatctggtgcagtagctacacaaaggatgacttcagagttcagctggcactatattcctggagctggagatgatgaagagagttgggcacgtggtctcactcctacattattctggaagcactcatatgatctgcttgatggtggaccagacctttgtaatcagttagttgcagatattgttgaaaaagatagggtctatcgtgcacagagaggcgaatattctccccaaattacagctaagcctttgaagtgttcaagccatgatggtcctttcagtaatggtgatcatacaagtattgtgcaaccaatggactcggatcctcctaccgttactgctatggacaaacaaaattccagtgatggccatatactcttctggattgggacatcaaaccttgcagtagcatcaactctccaagttggagattccttagctgaagtggattgtatactgaactgtgacagcacatcaaatttacctttgacttcatcagagaattcttaccttgaactacctatggtgggatcaaaggacgaccggttttcgttgatgaaaaaccttccaaaagcagttagctttgcaaacaggaatttgatagcagggaagaagctactaatatgctgtcaaaatggagaggatataagcatctgtgtggccttggcgataattacacgattatttgattgcgatggattctttgatcatggcaattcatttctgaaaggagacgtcacgaagttggagatgaggaagaggctggtttttgtttgcaaatatgctgttaatgcaagaccatctagaggaaacttgaagcaggtctatggtttcctttgcagcgagaaggaacagttttcttgtttgacgtag</cdnaseq>

Protein Sequence

<aaseq>MAAAAASSESADAAAAGPSTLSIYKAARRIKRRESTLYNALRSV ADDAAFVAEIAALWPALPLVANLRCGLWYLPPRAVAATCYFKSTDGHAGNWAFSTARL NLHLALLAGERGGCIIVDSTRRGKRFPDSMSKTIPIWCCVLNRAIERYRLQTNNKSAA VANKDAEKISESSNWDNSVHLPVWVLETEKNAIEGRIEEWTTQFESCGADIRSLALSL KKPLRPLWISQRTRIWLNEVPELESWDFTPIILVSASASGAVATQRMTSEFSWHYIPG AGDDEESWARGLTPTLFWKHSYDLLDGGPDLCNQLVADIVEKDRVYRAQRGEYSPQIT AKPLKCSSHDGPFSNGDHTSIVQPMDSDPPTVTAMDKQNSSDGHILFWIGTSNLAVAS TLQVGDSLAEVDCILNCDSTSNLPLTSSENSYLELPMVGSKDDRFSLMKNLPKAVSFA NRNLIAGKKLLICCQNGEDISICVALAIITRLFDCDGFFDHGNSFLKGDVTKLEMRKR LVFVCKYAVNARPSRGNLKQVYGFLCSEKEQFSCLT</aaseq>

Gene Sequence

<dnaseqindica>3399..3574#3082..3141#2836..2944#2654..2757#1594..2308#976..1115#23..353#ctctctctttctcgtctctccaatggcggcggcggcggcgtcgtcggagtcagcggatgccgccgccgctgggccgtcgacgctgagcatctacaaggcggcgcggcgcatcaagcggcgggagagcacgctgtacaacgcgctgcggagcgtggcggacgacgccgcgttcgtggcggagatcgcggcgctgtggccggcgctgccgctggtcgccaacctccgctgcgggctctggtacttgccgccccgcgccgtcgccgccacctgctacttcaagtccaccgatgggcacgcgggcaactgggccttctccaccgcccgcctcaacctccacctcgccctcctcgctggtctgctcctggttcccccccttactcattgttgaagtatttggtctaaactatgctatatgtttaatccaggcgtctagaactagagtttagcactgcaatccgttttacctgtcgaagcaggtggtataattaaattgtttgctaattcagttatttcgaataaccatggtcaaatagttcgaacatttcagtatataatactccctccatttcgaaatgtttgacaccgttgactttttagcatatgtttgaccattcgtcttattaaaaaaatttgtgaaatatataaaactatatgtgtacatgaaagtatatttaacaacgaatcaaatgatatgaaaagaataaataactacttaatttttttgagtaagacgaatggtcaaacacatactaaaaagtcaacggtgtcaaacattttgaaacggagggagtaatataatatcagtgtggctgtgcggataattcgaattctcggaaggttgtgtaatatacagcttaataattcatgttactgtgatttttttcaagaattttcacttgctaaatatgatgcttgatgagtgcaaaatgcctttaacacaagtaatttgtttttgtctattttttctctgggcaggggagagaggagggtgcataattgttgattcaacaaggagagggaaacgtttccctgacagcatgtcaaagaccatacccatttggtgttgtgtcctcaaccgagcaattgagaggtatcggctgcagactaacaacaaggtaagtggagtggatttggatgtggttggtatatcggcttcctatagttctactggaacggcattatgtcactctaccctttccctttgtgcacatttacctcatttcaaggctttttattgctatagtttaatacttaaatttatacagtaaataacccttgtgcacatgtacctcatttcacggctttccattgatatagttaaatttgtacagtaaaaatgcataagatgcctgttttggtaactagtaactactatccttagagtatgccaaaatctgggcccaagtgatcactatagagaaccaaaggcaaacaacagaaataaggctgttgaaattcacaatgtgatttatgtctcctgttcttcctgttatatgatcctttcttcctgttcttctcatttgtccctttgtttgaatttcaaactttccatgttcacccatcctcatgatattttgtaattttgcatgttagtcagctgctgtagccaacaaagacgctgaaaagatctctgaatcatcaaactgggataactcagtgcatcttcctgtatgggttctagagactgagaaaaatgctatagaggggcgtatcgaggaatggacaacccaatttgaatcatgtggtgcagacattcgttctcttgcgttaagtttgaagaaaccactacgtccattgtggatatcacaaaggacacggatatggttaaatgaagttccagagcttgaatcatgggatttcacccctatcatattagtttcagcatctgcatctggtgcagtagctacacaaaggatgacttcagagttcagctggcactatattcctggagctggagatgatgaagagagttgggcacgtggtctcactcctacattattctggaagcactcatatgatctgcttgatggtggaccagacctttgtaatcagttagttgcagatattgttgaaaaagatagggtctatcgtgcacagagaggcgaatattctccccaaattacagctaagcctttgaagtgttcaagccatgatggtcctttcagtaatggtgatcatacaagtattgtgcaaccaatggactcggatcctcctaccgttactgctatggacaaacaaaattccagtgatggccatatactcttctggattgggacatcaaaccttgcagtagcatcaactctccaaggtacaaaacatgattatttatacagttgcatatttgttttattattgtttgtgctttcttgtcaatatcttgtcatgtactgcgttgatctgttgattttttttttttgttctttagcgggtctgtttatcattcttttatgcatatctctgtatactgcaaaaaagtgtgctagcctgtctacaagtttttgtattatgtagatgtggatagaatcatagatatcaactagttagaaccttcctttaatcaaatttgttgtttcaagatacatacaaagtttcatatgatgcaggcgtactgttgatgatagtttttttttttctgtatgcatgatctatgcagttggagattccttagctgaagtggattgtatactgaactgtgacagcacatcaaatttacctttgacttcatcagagaattcttaccttgaactacctatggtggtaagtgaaatttttctgaccattttagttttcccagtatgtaaacattgtcatcattttgtacttttatgctattagggatcaaaggacgaccggttttcgttgatgaaaaaccttccaaaagcagttagctttgcaaacaggaatttgatagcagggaagaagctactaatatgctgtcaaaatggtaaagctagcacatttccctatctgaaaaagcttacacatgctttcttcatcatgctgtaataagtaaaaccataagtttgcctgacagttctttgtacaagtgagcccttcattgttgttttatttcccttacaggagaggatataagcatctgtgtggccttggcgataattacacgattatttgattgcgatggtaagcatatttatacaacttctttattttagaagatgacttatctttgtatcaattttgcttctcttgaattaaaaaggtaattttgtggtgttgtgccatttttatcagttttctactcatcttaaatcatgtcaaaacataataatgctctcgatatcaaattatttttatagaagattaggtatgttccaacaatttaataatttcacgacatcaagtttacgtatctttaattaattgctctttgttccaaggattctttgatcatggcaattcatttctgaaaggagacgtcacgaagttggagatgaggaagaggctggtttttgtttgcaaatatgctgttaatgcaagaccatctagaggaaacttgaagcaggtctatggtttcctttgcagcgagaaggaacagttttcttgtttgacgtagtttatttacgtctagtcttgtggatcctgatcagttgtttcctttcctatcccctgcaagatgcatctatgtgttccgatcagttagggaagctctggtttctgagtttttcatgtcaactgatgaactgctagtgtatatggggaaccaatagtcgcaaattgcccttgggatttcactgacaaacaacctggagttgatctcataccaggttaatcgacaaactggcactgcttattaacctgttaatgatacgacggtggtttctgtaaaatcatcccagtgggacgatttgcaacagtggatgagaacttgcagtattattaggacagtaccgttcctaatgttcaagcaacac</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0555500, RefSeq:Os06g0555500