BGIOSGA036247

From RiceWiki
Revision as of 18:27, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA036247

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036247, complete gene.

LocusTag

OsI_38221

Ensembl Transcript ID

BGIOSGA036247-TA

Ensembl Protein ID

BGIOSGA036247-PA

Length

6546

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:12372894..12379439

Sequence Coding Region

12379296..12379439,12379134..12379179,12379035..12379061,12378052..12378175,12377108..12377187
,12374999..12375102,12372894..12372932

Genome Context

<gbrowseImage1> name=IndicaChromosome12:12372894..12379439 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:12372894..12379439 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCGCCGATGGCGGCGGCGGCGGAGGCCGGAAGAGCTCGTCGCCGGCCGGGAAGCCGGCGGAGGCGGCACGGGCGGTGAGCCTGCTCGCCGGACTCCCCTCGCGGGGCAACTTCGTCGCCGACAGCATCGCGTCCAGCATGGGAGGCCTCCCGATTTATGTCTGCCTGCACGACACCGCTCCTCCAGGAATGAGGGCTGATTGTAGTGCTAGTGAGGGACAAGTTATAGACACAGACACCACAAACATTTTAATCAGATCTCTCCAGTTGAGCAAACAGAAAAATGAGGCAAAAGATGTAGGATCAAGGACTCCAGGAGAAAGCAGCAAGGGGAAAAGGTCTGCTTCCAGACTTTTAGATGGCAAGAATCCATCTAAAAGAGCTAACACTGGCAGCACAGCAGGGTCATCTGCCCATGGGGAATTGGGATCTGTTTTTTCTGAGCAGACGCTCCAATCATTTACGGTGGAGAAGTTGCGTATTCTTCTGAAAGAGAGAGGGCTCTCACCAAAAGGCAAAAAGGATGAACTGATCGCCCGCTTAATTGAGTCCTCGGAGTGA</cdnaseq>

Protein Sequence

<aaseq>MGADGGGGGGRKSSSPAGKPAEAARAVSLLAGLPSRGNFVADSIASSMGGLPIYVCLHDTAPPGMRADCSASEGQVIDTDTTNILIRSLQLSKQKNEAKDVGSRTPGESSKGKRSASRLLDGKNPSKRANTGSTAGSSAHGELGSVFSEQTLQSFTVEKLRILLKERGLSPKGKKDELIARLIESSE</aaseq>

Gene Sequence

<dnaseqindica>1..144#261..306#379..405#1265..1388#2253..2332#4338..4441#6508..6546#ATGGGCGCCGATGGCGGCGGCGGCGGAGGCCGGAAGAGCTCGTCGCCGGCCGGGAAGCCGGCGGAGGCGGCACGGGCGGTGAGCCTGCTCGCCGGACTCCCCTCGCGGGGCAACTTCGTCGCCGACAGCATCGCGTCCAGCATGGTGCGTTCGTTCCCCCCCACCCCTAAAATGGACCAGCCTTTTTCTTGGCATGTTAGAAGGGTTCTTGTGAAAAGCCCTCTGATTTTTATGATTTTTTATTATTATTTTTTGCGCAGGGAGGCCTCCCGATTTATGTCTGCCTGCACGACACCGCTCCTCCAGGTTTGTTTGTGATTTTCTAGGATAATCAAGCTTTACTTTTATTATTGTGATGATGCTAATTTGTTGTTTTAGGAATGAGGGCTGATTGTAGTGCTAGTGGTGTGTACTGTGGAGAGACAGATTTGAAGTAGAAGGATGATCCTTTCTACTAGGGTTTTATGTAGAATTTTCCTTGTAAGAACGCAGTCATCTTGCCTAGGTTTTGTTCTTTCGATTGGCAATGCTGTTGGCATCATGCTTAATTTGTGGTTACTGAATTTGTTTTGCTGATGTTAAGAGTTGGAATTTCTATGGGTTTACTCAGAATGTCTCTTGCAGGAAAGCTAAAGTCTATATTTGTTCTTTGGATTTGTGGTGGCACTGTTGACTGTTGTCATGCTTATTTTATGGTTTCCTGGAGTAGTTTACAGGTTTTCAGAGTGAGAATTGCAGGTGTTTGTGAAATATTGTACTGAACCATTCTTTGGTGGTTAAATAGATTTAAATCTTCTGGATGTACAGTGTAGGAGTTTAGTAGCTTGGCAATGGGGATAAATGGTTTGCTTTCCATTCAATGAAATTTAGATTTAGTAGTGTTTGGGAGTGAATTTTACTGCCTTTGAGTTTTCTAGTGATTACCTAAAGTGAGCTGTCCCTAAGGAAAAAATGAAGCTACAGAGAAGAATTTCTGATGTTGCTTTTTTTTTTCTTCGGATCGAGTGAGACATTGTGCTGCTGTCACAAAACTTTTGCCATGTGTTTCTTGGGAGTCTTATCTTTTGAATATCATTTTTGGACGTATATGATTTACATTTTATAGTGGCAGTTGTTAGTATATGATCTATTGTCAGACCATGATCTTTTACATATTTTCATTACTTATGTTCTTATGATAAAGCTGATTACTGATGACACAAACAGATCATTTTAAGGCTGTTTTGCTCTGTTCATTGACTGATCACCGTTTTTGTCATTTTAGAGGGACAAGTTATAGACACAGACACCACAAACATTTTAATCAGATCTCTCCAGTTGAGCAAACAGAAAAATGAGGCAAAAGATGTAGGATCAAGGACTCCAGGAGAAAGCAGCAAGGGGAAAAGGTACATCGCTCTTATGACATCTTTACAATATTGAACCTCATTTTTGCAATGTACAATGTTCAGTTTTAGAGTTTCAATTAACAGCTTCAGATTATTTTCTTCATGACATGGTTACTTGTGAACTGAGCATGTCCCTCCTGAAACTTTTTTGATCAAATAATCCTCCCTGGAACTTGCTTCTTAATCTAGCGTTGTTTGTCATTTTCCTCACTTGATATTAAGCTATTGACGTACTGTCATTTTTATCGATCTGTTGAACAGAAATTCATCCCATCATAGTTATTGCCTGAGCAGAATGTAGTTTAGCTCTATTTTTTTGAGCAAAAACCATCTGCAGAACCTTTGTCAAATATCAATGGAAACATTGTTTTGCATGAAGGGCATCAATTTGATACAAGCTGTGGATGATTTTGGAAACTTGTTTCCCTTTAAAAAAAAATCTATGAACTAAGTAAAATCCATATCGTAGTCTCTTGGATGATACAAGTGCTAGGCTACAGTTAAAACTGTAAGATAGGCAATTATCAGATGAACTCTGAAAACATGCCTTGACCTGGGATTAACTTGGGGAATGCCCTAGTCTATTTAATTGAAGGGCGGTGTGCTACTGCCATTTGCATTACAAAAAAGTTATGCCAGACAAACCTATTGTTCTCCTATGCTTTTTTTTTTTAGATTTTGATTTGGTGCCTTTTCTGTCATTGGAATTTTTGTGCCATTTAGATTGCTTGTGATGCCAGCTAGTAGGACAAAAATCAACTCTTTTCAATTGCTGACTTGTAGAAAAGTTGTCTCCTAAAACTTCTTGCAATTGTCAGTTAAATTTTATCCTCCATGTAGCTTATGTTCCTTCTTTTTTATCAGGTCTGCTTCCAGACTTTTAGATGGCAAGAATCCATCTAAAAGAGCTAACACTGGCAGCACAGCAGGGTCATCTGCCCATGGTAACTATTTGATTCTTCTCTGCACCCTTTCTTATATGAGTAGTCATGCATAGTTTTATGAGTAATATGTGCATTGAAGGAAAAGGCTTATCAGTAATTTATTTGTTGCTGTTGTACGTTTGCAGTGTTAGGTAAATAATGTTAGTTCCTTGGAAAAGAAATTGCTGTTTTCCCTTTGTTTTCTTGGTCTTTAAATTTGGAGTTGTCAAACTTAGGTTGTGTTCTTTTGGAGGGGTTGCGAACCCCTCCCCTTCGCACGGAAAACGGAGCGATAGATTAACACGTGGTTAATTAAGTATTACCTATAAAAAACTTGAAAAATGGATTAATATGATTTTTTAAAGCAACTTTCCTATATAAACTTCATGCAAAACACGCACCGTTTAGCAGTTTGAAAAGCGTGCACGCGGAAAACGAGGGAGATGGGTTGGGAACCCATGGGAAAGAACACACCTTAGGCCGTGTTCTTTTTATGGGATGTTGTGGCTGATTAGCTGCATGCAAAATGAGAAACATAATTAGCATATGAATAATTGAGTATTAATTATTAAAAACTTGAAAAATGGATTTATTTTTTTTAAAGCATCTTCTACATAGATAGTTTCCGCACGAAACATACCATTTTTTTTTAGATGAGCGAAACATACCATTTAGTAGTTTGAAAAGTGTGTTAACGGAAATCGAGGAATAGCTAAGTTTAATCAGCTCTTTAGAACTTGCCCTTAATTTGGGTGAGAAGTTGAAGTTATTATAGGACAAATAAACTGGTACTCTACTTTGAGTGGTACTTTTCTGTAAAAAAAAATGGCACTGAGGGCATTTATGAAACTATAGCTGATGCAGATAGCAAAAATTGCGTGATTCATTGTCGCTTTGCTAACTTTTATGTTGCTATTATATGACCTATTTCCTGAATTTTCAGAAGCATTTAGACAGTTGTATACATATTTTGTTTTTATAATACGATGCAACATTTGTTTCTTTTTCTGACTACAGTGATGCTTCTGGCCAGCTTAGTTATATGAAGTAAGAAATCAATACATCTTAAATTGAAGTATCCAAGTATAAAATCCAATATGGCTACTACGTCATATATCAAAATCTTAAAATATAAATAACATTATGATAGTTTTGTTGGTAAAATTGATTAATTTGAGAAACCAATGATGTGGTTTTAATACTGAGTACTGGTAGATAATTAAAGGAACGCACTGCCAAATACCACGCAAATGTCACATAAGCTGGAGAATAACATTTGCTGTGATATTTTCCATCCAAAGGCCTCAAATGAACAATCATGCAGGCCGAACTATTTTCTTATTTCCTTCCTTTGATGTACTCCATGTAATGTGCCCATCAGCCGCTGCCCACTTCCTCCAACCCAGTGCATGGCCTGAGGATGACGTTCTAAAAAGTAGGGGCCAGATGGAAGAGAGATTGATTTCCAACTGACTGTACATTAGAGGACTAGAGAAGAAGAAATAATACAGAACAAGAAACAAACCAGGGTAGTTTTTACATTTTCAATGTTCTCCCCAAAATAGGACCCGCCGTTACTTTTGGATGGACAAAATGGACAGCAGTGGTATTTTGCAATTCACAGATTTTGCAATGGCATTTACCAGCCCAAGTTTGCAGTGGTATTTTCCAAGTTACCCTTCTTTGAGATGGCACTAGCAAATTTATTGTGTATATCCCTTTGTATATGATCTGAATAAATAGTGAAACTCAGAATAATTTCAGATGATTAAAGTCTGCTCTAACTGTGCAAGCCTAGTTTTCTTGTACCAAATTAGAATTCTGAATAACAATAAGATTCCATATGTTTTTGAAAAAGAAGATTTTGACCTATATTGTACATAGATTATTCAGTTAACACCTTTTTTTAGGTATTTTCCCTCATCATCTGAGCATCAATATTATCTTGAGAACAACATAATCCACAAAATTCTGAGCATCAATCATTTTAGTACTATTGAATATAATATCAACTTTGATCTTGCAGGGGAATTGGGATCTGTTTTTTCTGAGCAGACGCTCCAATCATTTACGGTGGAGAAGTTGCGTATTCTTCTGAAAGAGAGAGGGCTCTCACCAAAAGGCAAAAAGGTAAGTACAGAAAATGCTTAATTTTGTAACTCCCTCTTTCAGTTTTAAGAACTTGCAAAATCTTGTTTATGCCTGGGAGATTGCTAGACGTTTGATACCCAAGGGTACATTGTTCTGCTGTCTCATTTAAATCTAGAAAATTTTAATAGTACTTTAGTTTTCTAGTCATAAATTTATGACTAGTGAGTCCCAGTGTGAATATTTCTGTTGTAAATATTTTTTTCATTATATTAATAAAGCATTAACAGCAGGGGCCTCCCCTGCTGTGTTGTCTTTTTTTAAAAAAAAGGGAATCATACATGTGTGGAACACGCTGCTTAAATAAAAAATCATATGTTTGGAATTGTTGATAATCATATACCTGAATTTCAAGAAATATTCACATCTTTTTGATTGATCGACTTTAGCAATTGGAATTTCGATCTCTGGTGGCTGGTAGCCTAGCGGTGGGTCATCAGGTAGAGCAGTTTGTTATATGCTTGGGTGAGGGTGTTTGGCTTCATCAGAAGCAAGCACAATGTACTGTTGGCGACTGTTGCTGTGGTGCTGACCATTATGGTGTTGGAATTAAAGGGAAGGAACCCTCAGATTGTGGTGGGTAAGAGATGGTGGTAGTGGAATCATATCAAAGTGTGGTGCTATTGACTAGAGAAAAGTTGATGCAGGAAGGAAAAAACTGGAGATTGTGGCGGAGGGTTGGGTTTGGTTTGGCTTTGGCCAGGGATAATAAATGATGGAGCTGTAGCCTGTAGAATTAGGCCTTGTTTAGTTCCCAAAACAAAAACTTTTCACCCATCACATCAAATATTTGGACACATGCGTGGAGTATTAATTATGGACAAAAAGAAAAACCAATTACACAGTTTACGTGTAAATTGTGAGATGAATCTTTTAAGCCTAATTGCGCCATGATTTGACAATGTGGTGCTACAGTAAACATTTGCTAATGACGGATTAATTAGGCTTAATAAATTTGTCTCGCAGTTTCCTAGCAGAATCTGTAATTTGTTTTGTTATTAGACTACGTTTAATACTTCAAATGTATATCCGTATATCCGATGTGACAACCAAACCCGAAAATTTTCCCCAACTAAACAAGGCCTTAGATGGACTTGAGAGGGGTGGATTTTGCTTAGAGGGTATACAGAAGGGTAATGATTACTTGAATAGACATGGTGGAGAGGATGTTGGTTTGGGTGCGCTGACGATTGAGGATATATACTGAAGGTTTTAGATATGATGTGTGCAAACCATGCAGAAGGAGACATGACCATATTGGACAGCTTTGGTGGGCATTCAAATTTTTAATGCAATATGATATCTAATTGGCAAATGGTAATTTGTATGGTGATGAAATCACAAACACAAGTTACAGAAATGGAAATACAATTGTTTTGATGTTTTTAGGGCCACAGTTGTGTTTTCTTGACTAACTATGATTAGTGAACCTTGTAAACAAATAAACAATAGCATGAGAAACAGAACCCTCACCCCAACCATGATCAGCACTGTTTGCACCTACGGACACTGGATTTCACAGGGAAACTGGAATTTGAAATGGAGTACTTTCTTTGATGAGTAGAAAGGCATGTATTGAAAGGCTAAACACCGGCTGATAGAAGTTGTCATATATGGAGACAATAGTCTTATATTCGCTGCCCATTAAACAAAATAATACTCCCTCCATCCCAAAATATTTGACGCCGTTGACTTTTTTCAAAATGTTTGACCATTCATCTTATTCAAAAGATTTAAGTAATTATTAATTTTTTTCCTATCATTTGATTTATTGTTAAATATACTTTTATGTATACATATAGTTTTACATATTTAACAAATTTTTTTGAATAAAACGAACGGTCAAACATGTTTAAAAAAGTCAACGGCGTCAAACATTTAGGGAAGGAGGTAGTATGAAGGATATCACACGTTCGAAGGGTTGTTCACTTTACTGTCTATCTTTTGAACATTTAGTTATGAACCAAAAAAGAATAGCACTCATTTATTTTGAGATCACTCATCTAATTCCTTTTCTTGCTAAATCAAACTTTTGTCCCTTGTTGCAGGATGAACTGATCGCCCGCTTAATTGAGTCCTCGGAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036247