Os06g0556600

From RiceWiki
Revision as of 09:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0556600| Description = Similar to Pollen allergen Phl p 11| Version = NM_001064392.1 GI:115468515 GeneID:4341289| Length = 1062 bp| Defini...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0556600

Description

Similar to Pollen allergen Phl p 11

Version

NM_001064392.1 GI:115468515 GeneID:4341289

Length

1062 bp

Definition

Oryza sativa Japonica Group Os06g0556600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:22099686..22100747

Sequence Coding Region

22099766..22099952,22100040..22100380

Expression

GEO Profiles:Os06g0556600

Genome Context

<gbrowseImage1> name=NC_008399:22099686..22100747 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:22099686..22100747 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcgtcctcgcttcgccaccacggcgccattgttggcgctcgccgtcctcgccgccgtggtgtccgtcgccgtcgccaccgctcccgccggcaaggaccccggcggcttcgtcgtcaccgggcgcgtctactgcgacccctgccgcgccggcttcgagaccaacgtctccaaaagcatcccaggggcgacggtgtcggtggagtgcaggcactacggggcggggagggagagcctgaaggcggaggcgacgacggacgagaaggggtggtacaaggtggagatcgaccaggaccaccaggaggagatctgcgaggtggtgctggacaagagcagcgacccggcgtgctccgagacggagaagacccgcgaccggtcccgcgtcccgctcaccagcaacaacggcctcaagcagaacggcatccgctacgccaaccccatcgccttcttccgcaaggagcccctcgccgactgcggctccatcctccagaagtacgacctcaaggacgcccccgagaccccatga</cdnaseq>

Protein Sequence

<aaseq>MARPRFATTAPLLALAVLAAVVSVAVATAPAGKDPGGFVVTGRV YCDPCRAGFETNVSKSIPGATVSVECRHYGAGRESLKAEATTDEKGWYKVEIDQDHQE EICEVVLDKSSDPACSETEKTRDRSRVPLTSNNGLKQNGIRYANPIAFFRKEPLADCG SILQKYDLKDAPETP</aaseq>

Gene Sequence

<dnaseqindica>81..267#355..695#acctcctccccctccacgccatccccgacaccgatcgagagagagagatcgcaccgatcgacgtacggtacgagacgaccatggcgcgtcctcgcttcgccaccacggcgccattgttggcgctcgccgtcctcgccgccgtggtgtccgtcgccgtcgccaccgctcccgccggcaaggaccccggcggcttcgtcgtcaccgggcgcgtctactgcgacccctgccgcgccggcttcgagaccaacgtctccaaaagcatcccaggtgcgtagagatcgaatcgaatcgaagaagcaataagaaggcaggtgcaggcgaggtgactgaggaaatgcgtgcgtgcgtgcgtaggggcgacggtgtcggtggagtgcaggcactacggggcggggagggagagcctgaaggcggaggcgacgacggacgagaaggggtggtacaaggtggagatcgaccaggaccaccaggaggagatctgcgaggtggtgctggacaagagcagcgacccggcgtgctccgagacggagaagacccgcgaccggtcccgcgtcccgctcaccagcaacaacggcctcaagcagaacggcatccgctacgccaaccccatcgccttcttccgcaaggagcccctcgccgactgcggctccatcctccagaagtacgacctcaaggacgcccccgagaccccatgatcatcatcatatatatgtttctccttagcagtgcatcaaacgttccttcaaatttgagcctctccgaagctcaagatggagccgccgccgcccgtgtagaagtaaattaatctacgattgcagcatgcaataacggagtttacattgccgatcgatctgttttgtacgtacctaagtaatttggagacgctgatgtgattctttgttcattcatcaagagtctttgtgtgtgattgtaccctcctcctcttgttgctctgtaattacctactccactattactaagtacttgttgatctgcggggggcgcctatatacattgctgtaactgtgtgacacacattaattactccatccatttcatact</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0556600, RefSeq:Os06g0556600