Os06g0561000

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Revision as of 09:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0561000| Description = Similar to Myo-inositol oxygenase| Version = NM_001064406.1 GI:115468543 GeneID:4341305| Length = 3905 bp| Definiti...")
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Gene Name

Os06g0561000

Description

Similar to Myo-inositol oxygenase

Version

NM_001064406.1 GI:115468543 GeneID:4341305

Length

3905 bp

Definition

Oryza sativa Japonica Group Os06g0561000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:22355480..22359384

Sequence Coding Region

22355662..22355692,22355836..22355950,22357051..22357132,22357267..22357471,22358060..22358119
,22358243..22358295,22358412..22358534,22358667..22358736,22358835..22358913
,22358995..22359076,22359179..22359205

Expression

GEO Profiles:Os06g0561000

Genome Context

<gbrowseImage1> name=NC_008399:22355480..22359384 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:22355480..22359384 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaccatcaccattgagcagcctcaccttgatgctatcgccgaccggaaggtcgccggcggcggcggcggcgacaacgcggcggagctcgtgctcgacggcggcttcgtcgtgccggactccaacgccttcggcaacgccttcaggaattatgaggccgagtctgagaggaaggagacggtggaggagttctaccgggtcaaccacatcaaccagacatatgatttcgtgaggcggatgcgggaggagtacggtagggtggacaagacggagatggggatctgggagtgcatcgagctgctcaacgagttcatcgacgacagcgacccggacctcgacatgccgcagatcgagcacctcctccagaccgccgaggccatccgcaaggatttccccgacgaggactggctccacctcactggcctcatccacgatctgggcaaggtgctgctgcatcccagctttggggagctcccacagtggtcagtcgtcggtgacaccttccccgtcggctgcgcattcgacgaatgcaacgtccacttcaagtacttcaaggagaaccctgactacctgaacccaaagctcaacaccaagtttggggcctactccgagggctgtggccttgacaatgttctcatgtcctggggccatgacgactacatgtacctggttgccaaggagaacaagaccactcttccttctgcaggcttgttcatcatcagatatcattcattctaccccctgcacaagcatggagcctacatgcatctgatgaacgatgaggacaaggagaacctcaaatggctgcgtgtgttcaacaaatacgacctgtacagcaagagcaatgagaggatagacgttgagaaggtgaagccctactacatgtcactcatcgaaaagtatttcccggccaagttgagatggtga</cdnaseq>

Protein Sequence

<aaseq>MTITIEQPHLDAIADRKVAGGGGGDNAAELVLDGGFVVPDSNAF GNAFRNYEAESERKETVEEFYRVNHINQTYDFVRRMREEYGRVDKTEMGIWECIELLN EFIDDSDPDLDMPQIEHLLQTAEAIRKDFPDEDWLHLTGLIHDLGKVLLHPSFGELPQ WSVVGDTFPVGCAFDECNVHFKYFKENPDYLNPKLNTKFGAYSEGCGLDNVLMSWGHD DYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYMHLMNDEDKENLKWLRVFNKYD LYSKSNERIDVEKVKPYYMSLIEKYFPAKLRW</aaseq>

Gene Sequence

<dnaseqindica>183..213#357..471#1572..1653#1788..1992#2581..2640#2764..2816#2933..3055#3188..3257#3356..3434#3516..3597#3700..3726#agctcaggcagcagcagaaagcaacgccaatacgccattgccgtgctcctcgacctgcatgcacctctgttcttggcgttgagatacatagaggcttggggtgggtgtttaagaactaagaccggagttaattagcacccctgtggctaccatcgatctgtctaaagagtgattagatcgagatgaccatcaccattgagcagcctcaccttggtgagctcatgatccttttctctctctctcttgatttcttgattccagtccgtgaggaagaaaaggttcagcaatgttcctggatggatggatggatcgtggaactaattaaggttctaagttctgacatggttcgcttgcagatgctatcgccgaccggaaggtcgccggcggcggcggcggcgacaacgcggcggagctcgtgctcgacggcggcttcgtcgtgccggactccaacgccttcggcaacgccttcaggtcagctacatattcctgcataggaaaaaaacagagcatcatgcaaaaacagagcaaaacagagtgtcaactatggttaaaaatattatcccctcagaagaaaaaatatttaaaatatttctagtggattagggaatttaattaatcatgtagtatttttttaaatatggtgaaggttattgtttctctttgcaaaaaacagagtgggcagcaagttttttttcaagtggacatgtgcaaataatcatatattttgcatatggaatgtcttcttttttctcctttgcaaaaacagaggttggtattacttgctccctctaaaataagccaacatcgtattaagatatgatatattttagtacaacgttatatttagatttgttatattagaatgattggcttatttttaggacaatgcgagcaggctgacaagacagacatgatattttcgtacgaaattagtaaactagaacatgggcacaactcgaaatgaaagagatgtgtggccattcttgaaacttgtggttgtgcattcaaatcgtacatacctctctctcaagccacaatacatgtttgtcccattacttcaagttgtctttccatgattagccgtttggtttagtttttgttgaaacgtccaaacccaggttttgtttttttttcagataaaactggacaagaagaagatgaatttgactacttaaacgtaaactcaattttgctgaccaaagtggcaagctacttactggtcaaataaaataaaataaagacttatcttttcttgtacgatttcaaaggtttctgcgtgtctatgcacagtgaatgtcccacgtggcatctgtggctgcattaacatggccttttgcctattccttttttgcacgttatcattttcgcttcttcaggaattctgtacttcaatttgatgtttctttaaaaagtccaacacgtggacaaataaaacactacctgtgttcgaaaaataaaaaccttatggtcataatctagaaattgaaatctttttcaacggtggtagtaaaagatatttcttaaaaaaaaggaattaaccggaataatatggtgatgttttaaatctccaggaattatgaggccgagtctgagaggaaggagacggtggaggagttctaccgggtcaaccacatcaaccagacatatgatttcgtaagtgcaaattctgtatctaataatctttttttaaaaaaatacactcataatatcctaaacgacaagtaaaaaagaacgggagctttaatatatgagatttaccattattttggtgcattgtaacattgcaggtgaggcggatgcgggaggagtacggtagggtggacaagacggagatggggatctgggagtgcatcgagctgctcaacgagttcatcgacgacagcgacccggacctcgacatgccgcagatcgagcacctcctccagaccgccgaggccatccgcaaggatttccccgacgaggactggctccacctcactggcctcatccacggtaaattaaactattttataaccgccacaaaaaccgtcactgtaattgcacatccaccgcgtcgccgcaatgaactgataggcaggcctcacacgatacaccgggtaggatttgttggtgtaagagcaggtacaatagcaggctattagccagctataaatatattttaatgagataaacgatgagagagaagagtagtgggctacagatctgtagccagctgcagcacggacttcaagacgcaatgtgtgtatgacaggtgataccatatattaatagtatagtaagcaactattgaatgaattggctattagattagctatagatgaattggagctagtagtgggctatactattaaacttgctctaaggtagtaataatagtatatatctaggactcatccagtcactagcaggtaggccatacgataaataaagatgaataattagatatgatggagtgatacagtatcagtgacggttcgtaacaacctctttggaattactcggctaaaggaagaaagaaatgaaatggcaatacagtggggcacacttgtgacgtgtaacatgttctcttttctttttcagatctgggcaaggtgctgctgcatcccagctttggggagctcccacagtggtcagtcgtcggtaagaaacaaacaacagaagcaaacagcttattgccatctcactgaaacttcttcagattcagctaggaacaatagctgaacatccatccatctctgaatctgaatgtctttgacctttcaggtgacaccttccccgtcggctgcgcattcgacgaatgcaacgtccacttcaaggtaaccaatgaatcatctagcaaactgttcaagacaaatcaaaagcgtagatggatcaagcagtgagctagtggtctaagactgaaactgaaaatattttgtctgaaaatgtgcagtacttcaaggagaaccctgactacctgaacccaaagctcaacaccaagtttggggcctactccgagggctgtggccttgacaatgttctcatgtcctggggccatgacgactacatgtacctggtaaaacacacggttcatcgtgtcgattcatcaccaattgcataccatggagcagagaaatcttcagttctagtactgaggttgtagttttctctgaaatgttgatgtgtttcttgttcttgttcatctcaggttgccaaggagaacaagaccactcttccttctgcaggcttgttcatcatcagatatcattcattctaccgtaagtgcgcgcgacagtcttctttttttcaattttgtcagaattacaagttttaagtaagttttagctaaattttgctatctttgtccatgattcagccctgcacaagcatggagcctacatgcatctgatgaacgatgaggacaaggagaacctcaaatggctgcgtgtgttcaagtaagccaccagattgatcaccctgcatcttaatgtatatagtatgaaaatgtactgaacatgaatggttttcttctgcagcaaatacgacctgtacagcaagagcaatgagaggatagacgttgagaaggtgaagccctactacatgtcactcatcgaaaaggtatgatcgattttgcagcgaatactgaagcttgaaacagacttctttttgtcctaaaacctgaagaaatgatcttctttttctctctgaattctctcgcagtatttcccggccaagttgagatggtgaagaagagggagagaacataaaaaaaattggtcgaaattatcctgtaatatgatgtaattgcaggagttcagttggctgtacaagtatgtagtagtacgtgtacacattttgtatgttaagagcagaatttgttgggagccatgcacgtggaataaaagttgccggtgattgttctttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0561000, RefSeq:Os06g0561000