BGIOSGA036475
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Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
BGIOSGA036475 |
|---|---|
| Description |
Japonica Group Os12g0197500 (Os12g0197500) mRNA, |
| Definition |
Oryza sativa Indica Group BGIOSGA036475, complete gene. |
| LocusTag |
NM_001072892.1 |
| Ensembl Transcript ID |
BGIOSGA036475-TA |
| Ensembl Protein ID |
BGIOSGA036475-PA |
| Length |
5327 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 12:5256421..5261747 |
| Sequence Coding Region |
5261687..5261747,5259639..5260477),complement(5258631..5258928,5257174..5257418),complement(5256803..5256960 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome12:5256421..5261747 source=RiceIndica12 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome12:5256421..5261747 source=RiceIndica12 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGCGTCCGCCGGCGATCGCCGCGGCGGCGGGGGGCCTCCCGGCTCCGGCGACGACTCCGGGGGTGGTTGGGAGACTGTTGAGAAGAGGGTAAAGAAACCAGCTCAACAAGTTGGGAAGGGGCAATGGGGACAATGGAATTCTCCAAATGCTGCACCTGCACCTACTGCACCATGGAGTGGCTCTGGAGCTTTTCATCATTCTGGAAACACTTTGGTTCGACATTCTGATCGTAGGCCAGCAAGAGGCACTCCTAGGCCACCACCACAAAACAGGTCTACAGGGGCAGAACTGCAAGCACCACGCGGAGTTGTGACTGCACCTCTGGCAAATGGTTGGCAGTGGGGAGCCAGGTCTTGCCCACCTGGTACTGAAAGCAAGGAGGGTGGTCTTCCTTTGTCTGGTTGTGATCCTGAAACAGACAATGCTGAAGGTGATGACACATCGGACGATGATAATGATGATGATATGAGTGACGATTTGAGTGATGACTATGATTCTGATGCAAGTGAGAAAAGTTTTGAGACTCGGAAAAATCACAAGTTGTTCAAAGGTTTCTTCGAAGTCCTGGATGCGTTAAGTGTAGAACAGTTAAATGAACCAACTAGGCAATGGCATTGCCCAGCATGCAAAAATGGACCTGGTGCAATTGACTGGTACAAAGGGCTACAACCTTTGATGACTCATGCCAAAACAAAGGGTTCTATAAAGGTCAAGCGTCACAGAGAATTGGCTAGTTTATTGGAAGAAGAGCTATCTCGCAGGGGAACTTCAGTGGTACCATCTGGCGAGCAATTTAGGAAATGGAAAGGATTGCGGGAAGGCACTGATCGTGAAATTGTTTGGCCACCAATGGTTGTTGTTATGAACACTGTATTGGAACAAGATGAGGATGATAAGTGGAAAGGTATGGGGAACCAAGAGCTAATTGATTATTTCAGTGAATATGCTGCAAGCAAAGCACGCCATGCCTATGGTCCAAATGGGCACCGTGGCATGAGTGTGCTAATCTTTGACAGCTCGGCTGTGGGCTATATGGAAGCAGAACGTTTGCATGATCACTTTGTTCGTCAAAGAACAGACAGGAATACATGGAACAGTGCTCACAAGGTTACATTCTTACCTGGTGGGAAAAGGCAGCTGTATGGTTTCTTAGCTACAAAAGATGACATGGAGACATTCAATAGACATTGCCACGGAAAATCGCGTTTGAAATATGAGATGAGATCTTATAATGAGATGGTGGTTACCCAAATGAAGCAGATGAGCGAAGACAACCAGCAACTGAATTATCTGAAGAACAAAATGGTTAAGAAAGAGCAGCACTCTAAATTAGTAGAGGATACATTGAGTGTTGTTACCCAGAAACTTAGGGAGACAATGGAAGAGAATACTATTGTACGAAATAAAGCCAAAGAAAAGCACTTGGAGTATGAGAAAGAGATGAAGTACCAGGAGGAATTTTTCCATGATCAAATCGAAAAAATTCACAAGCCCACAGAGGAGAAAGAAATCAAGTTTGAGAAGTTGCTGCAAGAGGAGCGAGCAAAGGCTAGACAAAGTGATGTTGACTCTGGAAGTACTGAAGATCGCAGGCAAAGGAAGGAAAAGATTCAGAACTTCATAGACTGCCAGGTGAAGGATGTTGAGGAATTTGAAGCCGAACGAGACAAACTGATCAAATTGCATGAAGAGAAGAAGGTGAAGCTGAAGAAGGAGTACCTGGCGAAGGAATTTGAGCTTGAGAAGGAGCTGGACACCGCCCTCACTGCCCTGATGGATAAACACAAGCCGGACATCTTCAAATCCTCCACCTCGCCTTCGACATGA</cdnaseq> |
| Protein Sequence |
<aaseq>MASAGDRRGGGGPPGSGDDSGGGWETVEKRVKKPAQQVGKGQWGQWNSPNAAPAPTAPWSGSGAFHHSGNTLVRHSDRRPARGTPRPPPQNRSTGAELQAPRGVVTAPLANGWQWGARSCPPGTESKEGGLPLSGCDPETDNAEGDDTSDDDNDDDMSDDLSDDYDSDASEKSFETRKNHKLFKGFFEVLDALSVEQLNEPTRQWHCPACKNGPGAIDWYKGLQPLMTHAKTKGSIKVKRHRELASLLEEELSRRGTSVVPSGEQFRKWKGLREGTDREIVWPPMVVVMNTVLEQDEDDKWKGMGNQELIDYFSEYAASKARHAYGPNGHRGMSVLIFDSSAVGYMEAERLHDHFVRQRTDRNTWNSAHKVTFLPGGKRQLYGFLATKDDMETFNRHCHGKSRLKYEMRSYNEMVVTQMKQMSEDNQQLNYLKNKMVKKEQHSKLVEDTLSVVTQKLRETMEENTIVRNKAKEKHLEYEKEMKYQEEFFHDQIEKIHKPTEEKEIKFEKLLQEERAKARQSDVDSGSTEDRRQRKEKIQNFIDCQVKDVEEFEAERDKLIKLHEEKKVKLKKEYLAKEFELEKELDTALTALMDKHKPDIFKSSTSPST</aaseq> |
| Gene Sequence |
<dnaseqindica>1..61#1271..2109#2820..3117#4330..4574#4788..4945#5099..5327#ATGGCGTCCGCCGGCGATCGCCGCGGCGGCGGGGGGCCTCCCGGCTCCGGCGACGACTCCGGTGAGGCCCCGCTCCCCTCCCTCTCCCTTGTCCCGGTGGGCGGATGGCCGATCCCCGCAATGTCGGCGGCGGGTGCTGCTCGTTCGCGCGTAGGGTTTATGGGTTGGGTTGGGTTGGGTTGGGTTCCCCCGGGGATCGGTGCGTGGTTGGCGTGCGGGGTTTTGGTTTTTGTGGGGGTTTCGAGATGATGTGTGTAAGTGTGTTGCGGGGAGGTGGCCGCGGCGATGCGGGGGGATTTGGGTGCGCTGCGCGGGTGGATTGTTCGAGGTGATTGGTTGTTTCATTTTTTTTTTGGTTGATCGGGGTGTGTACTGTGTAGGGGGTTTAGTGCCGTGGTGCTTTGTGTGGTTGCGGATTCGGTGGTCTCGTCCACTGTGGTTGGTTCATCTGAAGGCGATTCGTTTTGGTTTGATTTGGTTAGTTTGATCCTTCTGTCTTTTTAGAGCTTCAGAGTTTGGTGTTGTTGGGTATTTTTGGGTTCCTTTCGGTGAGGATTTGTGTTCACTTTTTATTTGAAAAAAAAGGGAGATATATGCGTATTCACCTTATCGAGCATTCAGTTGTAATAGGTGGGTTTTTATTTGATTTTGCGGCTGGTTCATTGTGCTAAATTTGTGTTGTTTGAATGTTCGCCTAGCTTGCTAGACCGATAATTATGTCCACACGCTTATTGTAAGTTTGTAGCTATGTTAATTTTGCTTCCCTGCGCTCTTAGGTTTCTGGTGTGACCTTAATTTGCGATTGATCTATGCATGTGTGTTTAGGTCTTTACTACTGATAAAATTCAAAACTCTTAGAACTTTGCAAATACTACTTTATGCTGAATGATTTCTCTACTCAGTCTGGTCAGAATTAATTTACATTTTGTATAGAACTGTTGATATTTATATCTCTATGAATATTTTGATTGGACATAACATTACGAAATATATAATGCAATCCTAAAGTAGTGTTTACAATTGCTTTTGGAGACCTTTTGATATCAAGTACATATTTGTGACTTGAGAGAGTGTTCAGTGTTCTGTATTGGAACCTTTTATTGCTTTCATCATACATAAGAGCATTTCATAATTATTAATCACTGGCCTTCATCAGTTTTGGTGTGTGTCAAGGAGCTGCACTCGTGAATCTGTGTGTGCATGTGCATCTGCCTTATAATCACGTGAAAATAACATGTTATACTAATTTATGTAAATGCCTTGTATCCAGGGGGTGGTTGGGAGACTGTTGAGAAGAGGGTAAAGAAACCAGCTCAACAAGTTGGGAAGGGGCAATGGGGACAATGGAATTCTCCAAATGCTGCACCTGCACCTACTGCACCATGGAGTGGCTCTGGAGCTTTTCATCATTCTGGAAACACTTTGGTTCGACATTCTGATCGTAGGCCAGCAAGAGGCACTCCTAGGCCACCACCACAAAACAGGTCTACAGGGGCAGAACTGCAAGCACCACGCGGAGTTGTGACTGCACCTCTGGCAAATGGTTGGCAGTGGGGAGCCAGGTCTTGCCCACCTGGTACTGAAAGCAAGGAGGGTGGTCTTCCTTTGTCTGGTTGTGATCCTGAAACAGACAATGCTGAAGGTGATGACACATCGGACGATGATAATGATGATGATATGAGTGACGATTTGAGTGATGACTATGATTCTGATGCAAGTGAGAAAAGTTTTGAGACTCGGAAAAATCACAAGTTGTTCAAAGGTTTCTTCGAAGTCCTGGATGCGTTAAGTGTAGAACAGTTAAATGAACCAACTAGGCAATGGCATTGCCCAGCATGCAAAAATGGACCTGGTGCAATTGACTGGTACAAAGGGCTACAACCTTTGATGACTCATGCCAAAACAAAGGGTTCTATAAAGGTCAAGCGTCACAGAGAATTGGCTAGTTTATTGGAAGAAGAGCTATCTCGCAGGGGAACTTCAGTGGTACCATCTGGCGAGCAATTTAGGAAATGGAAAGGATTGCGGGAAGGCACTGATCGTGAAATTGTTTGGCCACCAATGGTTGTTGTTATGAACACTGTATTGGAACAAGATGAGGATGATAAGGTAACATTTTCTTTTGATTGCTGTTGAGTTTCGGTATAGATCTGCACCAGTTTTTCTGCCTGACTTATATCTTTATGAGCATAACTTTTACTCTTATCTTCTATTCATCATTCTGCAATTACAGGTCTTGTCTGCCACATTAAATTTGTAGTAAATATATATATTTTTGACTATTTTCTTGCTTATTTTTTTGTATCTCGTAAGAATATTGAGTTGATTCTACTGATTTGTTTACCTATTAATATCAAAAGCAATGCACAATTCTCAGGAGCAGTTACTATATGTTGAATTTTGTTACTCAAATATTATATGTTTTTTCTTATGCACTTTGATATAAATTGATTAGCAAGATTTATCCTCTTCATCACACATTTTAGTTGAATTTATTATGTTTTGTTCCAGCAGATATTTGTTTTCTCAAGTTTTAAAACTTAAAAAAGACTTCAAAATTCACTCTCTGTTGTGATTTTCTTGTATTTATACTTCATTGTGAAAGAATAAAAATATGCTGAGCAGTCAGGGTTATGTGAAAGAATAAAAATATGCTGAGCAGTCAGGGTTATCTAGGCATAGGTAGTATAATCAGTTGTTCATTAAAATGTATTTCTTATTTTCTTTATTATTGTGAAAGAATATCTGCTTGATCTATTAAATGTGTCTGCTTTTATGTTTTTATTGCATTCTAATATCTCCTCTTTGTCTCAATCTAGTGGAAAGGTATGGGGAACCAAGAGCTAATTGATTATTTCAGTGAATATGCTGCAAGCAAAGCACGCCATGCCTATGGTCCAAATGGGCACCGTGGCATGAGTGTGCTAATCTTTGACAGCTCGGCTGTGGGCTATATGGAAGCAGAACGTTTGCATGATCACTTTGTTCGTCAAAGAACAGACAGGAATACATGGAACAGTGCTCACAAGGTTACATTCTTACCTGGTGGGAAAAGGCAGCTGTATGGTTTCTTAGCTACAAAAGATGACATGGAGACATTCAATAGACATTGCCACGGTAAGCCATTTAACTATGGTTCAATATCCATACATTTAATTAATTAACGCTGTGTTTTTGGTGCAATTGTCATTCATCTGATAAATAACTGGCTTTCATTACTTTTATCTCCTGAATTCTTTCTGACGCCAATTATTATTGGTCACCTCTATGAAGTGCTCATGCCAAATACTAGCTTGCATTTTTATGATATGCTGCATATTCCTGCTCTTCATCTTCATTGGAATGTGATCACAATTGGTATTATTTACCGCAATATGTTTCTACTAATGCTTCACAACAATTCATACCTTCATTTCATTTTTATTACGTAGCATGTTATTATAGTGTACTCAATGCTCATCAGCTGGGTAGCTTTCTGGTAGTTTATCTCTACTACTTGAAAGCATGAATGTCTAATCTCATTCCATTCAAAATGATATTTCCCTTCTGATTGTAAGAAGAAAAATTCTATACTCAAGGACAATATGCAAGGGTAACTTACCCTCTCCGGGGGACAGCAAAGGATTAGATCTGTGCTTCTATGTTAATAAACCTTCAGTTATCTATTTTCTCCTAGAACATGGAATCCTATGATTTATGCTATGTATAGATTCATCATCATTGGGTTCAGCAAGAGTAATGTAGCCCATTAATAAAAAAGAACTGTTAAAGCCAAAATGTAAATGATGCTGATGGACCCTAATATTTTATTACCTTTGTGCAATACGGATAGGAGGCATGTGCTTGTCTTTTGTCTTGTATCCTTTACCTAGTTTCGTTTTGTTGTTTTTTTCTAAATAAAATACACCATTTTTAAAGTAAGAAAGATACTCTAGTTTGCAGATTTCTTTCTTTTATAAGAACAATTAATTCCTGAGCATTGCATTTGGGTTACATTCAACCCTCTATACTTCGAAAGTTTTATTTCTTCATATGCATTACAACCTGTCAATCTGTCATTCATCATAGCCTCTCTGCGTGTCAATTTGACTTCATATTTGCTATCCTTTTGATAGTAAAATAGAAGGGGAAGTGGTGTCTGCCTGTTTGTAATAAACAGGTCCTGGCCTCCCAAATATTTTCACAACAAATGCACCACCCATGTGACTGTTTATGTATCAATTGAACATGGCCATCAGTAATCTTGATTTTCTTAGCTTGGCTATCTTATGATTATTTTATTGTAACATTAATGCAAACCCCTCTTTCATACCTATTGCAAATTTTCAGGAAAATCGCGTTTGAAATATGAGATGAGATCTTATAATGAGATGGTGGTTACCCAAATGAAGCAGATGAGCGAAGACAACCAGCAACTGAATTATCTGAAGAACAAAATGGTTAAGAAAGAGCAGCACTCTAAATTAGTAGAGGATACATTGAGTGTTGTTACCCAGAAACTTAGGGAGACAATGGAAGAGAATACTATTGTACGAAATAAAGCCAAAGAAAAGCACTTGGAGTATGAGAAAGAGGTAACAATTGCTTAATTGGTTACCCTAATGAATATTATATTTTTTGGTAACATTTGTATGAGCAGCAACCAGAACTATCATATACTTAGTGTACATATCAGAAATATTCCGAGAGAACACATTCCTGCATTTGAAACTTGCCAATTTGACATTGTCTTGTACCCTTGTTTTGATTTTCGTTCCCTTTTCACCTTGTGGTTTTATACTTCGCAGATGAAGTACCAGGAGGAATTTTTCCATGATCAAATCGAAAAAATTCACAAGCCCACAGAGGAGAAAGAAATCAAGTTTGAGAAGTTGCTGCAAGAGGAGCGAGCAAAGGCTAGACAAAGTGATGTTGACTCTGGAAGTACTGAAGATCGCAGGCAAAGGTGAACAACCAGTTTAATGTTTTTTTGTGTGATGTCAGTTAAAATTACGATCCTTAGATCACTCTTCTAGGAGCAACAAATTTGAAATTTCCATTTGGAATGGAAATGCTCCGCATCAATATATAACCTAGTCGACATTGTTTCATTGTGCAGGAAGGAAAAGATTCAGAACTTCATAGACTGCCAGGTGAAGGATGTTGAGGAATTTGAAGCCGAACGAGACAAACTGATCAAATTGCATGAAGAGAAGAAGGTGAAGCTGAAGAAGGAGTACCTGGCGAAGGAATTTGAGCTTGAGAAGGAGCTGGACACCGCCCTCACTGCCCTGATGGATAAACACAAGCCGGACATCTTCAAATCCTCCACCTCGCCTTCGACATGA</dnaseqindica> 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