Os06g0562700

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Revision as of 09:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0562700| Description = Conserved hypothetical protein| Version = NM_001064412.1 GI:115468555 GeneID:4341311| Length = 2955 bp| Definition ...")
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Gene Name

Os06g0562700

Description

Conserved hypothetical protein

Version

NM_001064412.1 GI:115468555 GeneID:4341311

Length

2955 bp

Definition

Oryza sativa Japonica Group Os06g0562700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:22491169..22494123

Sequence Coding Region

22491294..22492044,22492312..22492373,22492561..22492836,22493427..22493558,22493658..22493732

Expression

GEO Profiles:Os06g0562700

Genome Context

<gbrowseImage1> name=NC_008399:22491169..22494123 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:22491169..22494123 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtttccgccgaaagggtccaatccctatgggcagcagcaaagttacggagggcagcaatcctatggccaaatccctggcagcagtggattttcgtcctcggcagcaacgggtggtgctgatggtagtcgatttggcgcccgtgtcgggcagggtgcagctgggcagtatggagggccttacgcttcagtgtacggcacacagcaggttggtggacttggtggcaaaggtccggcttcttctagtattcctaatttgcctgagccatccaagttctcgtctggatctgtagggtccagcatagcaagaccaaatgatgactatatggctgtgcgtggttatggacaaaagctagaccagtatggtagtgattatacattagagagaagaatgtatggtgatcactcagctaatcttggcaggagagatgggcttactgatttggatagaagatatcccgagcatgtttctggaggccatcagggttcatcaatgcgccatccacagctgctgaaaccccaactgcagtctggatctgatataagacaagccgattactttgcaggaaggtctgctccaatccatcaaggatcgcaggatattggtgcatatggaagagttgaagctgatcatcgcaacttgtccattcttgggaccgccccatatggaggacaacagtcagcttcgttgttgggaggagctcctaggacaaacattgatagcctctcctatgggcaagggtcatcaagcagcggttatgggatgggtctgccccctggacgggactatgcctcagggaaaggtcttctccatccttcttcggattctgattaccgagatagcattttatcccgtgtacatccaggcatctccatggttgatgaacgtgctgttgatcgggttggttatcgtcgtgaactggatctaagagatgaagaacgtcgaagggacctattactggaaagagaaaaggaacgtgaccgtgaacgggaacgagagctgcgagacctacgagatcgtgaaagagagcgtgaaagggaaagggaccgtgaaagactaagagaacgtgaaagagaaagggaacttgaacgtgaaagagaacgtcttcgtgaacgtcgcatgaaggagagggaacgggataggaagcaccctgctgattcaaggagggagcacactccacctagaactcctggtgatcggcggcgttcttcttctgttagagctgagaagcctttgcggcgaccttcacctcggcgtgatgctgtgcataggtggacctccatgttttctctgtag</cdnaseq>

Protein Sequence

<aaseq>MFPPKGSNPYGQQQSYGGQQSYGQIPGSSGFSSSAATGGADGSR FGARVGQGAAGQYGGPYASVYGTQQVGGLGGKGPASSSIPNLPEPSKFSSGSVGSSIA RPNDDYMAVRGYGQKLDQYGSDYTLERRMYGDHSANLGRRDGLTDLDRRYPEHVSGGH QGSSMRHPQLLKPQLQSGSDIRQADYFAGRSAPIHQGSQDIGAYGRVEADHRNLSILG TAPYGGQQSASLLGGAPRTNIDSLSYGQGSSSSGYGMGLPPGRDYASGKGLLHPSSDS DYRDSILSRVHPGISMVDERAVDRVGYRRELDLRDEERRRDLLLEREKERDREREREL RDLRDRERERERERDRERLRERERERELERERERLRERRMKERERDRKHPADSRREHT PPRTPGDRRRSSSVRAEKPLRRPSPRRDAVHRWTSMFSL</aaseq>

Gene Sequence

<dnaseqindica>2080..2830#1751..1812#1288..1563#566..697#392..466#agaccccctcctcgctctctctctcgctaacccttcctcgccgccgccgccgccgccgccgctatcccaccggcggagtcaccgcccgtcctcctctggagccgcgggacgcaggttctcaccgcgcgcatcgccgtcgcttcgtccgccccctccccaccacacaggtaaaccctagcgtcgacttggttctcgcttttcctcaaacgcgtcggggtgggagctctcctgcccgcgtccatggatgggatggattgatccgaggttcctcgcgtgtcctccctaatgcggtctccctctctaggtttatctcgaagggaggcgggtggtcgcggattttttttttatttggggggggtcggccaaaccctaggcgggcggggcgtccgccatgtttccgccgaaagggtccaatccctatgggcagcagcaaagttacggagggcagcaatcctatggccaaatcgtgagtccctgaaatgcctgcttatctagtgttttttttgcttcggtacctaatccggttctcatatatgcatatgttgttttgattggactcatgcagcctggcagcagtggattttcgtcctcggcagcaacgggtggtgctgatggtagtcgatttggcgcccgtgtcgggcagggtgcagctgggcagtatggagggccttacgcttcagtgtacggcacacagcaggttgttagctagtatataacaggaaaaatttctatcttttagattttggctccatgtaatttattcagccaccaactgtcatttgtcgcttgttaatactccctgcgtttgcaaatacttgaccctattgattactgctttcactttgaccataaaaaaaatttgccagttctgttagtttgaagcaacaatttcccacaaaatccaggagttgatgataccttatggaacaattcgttcaaaatgggaaccatgctctacactttataaaacaagtggcactgtttgaaagtaaaattagtaaatctcgagcatatgatcgtttatgtcaattggttgtattaactgacttggtgtcttggcatatatggaaaaagaaactggttttattggcaaactactcattccctttggtttagttttttttgccaagttccctcattgtgcattgcaatgcccttctctactgcctatctgtttttagctttaccattcgatttctctgatggttgaaactgccttctcatttttcttttagttgtcttgttgcatagtgtctcaaatgaactttcaatttaccctttcaacaggttggtggacttggtggcaaaggtccggcttcttctagtattcctaatttgcctgagccatccaagttctcgtctggatctgtagggtccagcatagcaagaccaaatgatgactatatggctgtgcgtggttatggacaaaagctagaccagtatggtagtgattatacattagagagaagaatgtatggtgatcactcagctaatcttggcaggagagatgggcttactgatttggatagaagatatcccgagcatgtttctggaggccatcaggtcacccccgcacccttcccgcgccctatctcttttgtttgtcttctcagtaatcctttcctttttgactttaacaatgcattcaaatatggagcaggtagatttattttttccctcacaaaactttgttctgctcgtttcccttctctggcttttcataaacttaatcctgctgtttttttttcagggttcatcaatgcgccatccacagctgctgaaaccccaactgcagtctggatctgatataaggtatgtcggctcttagtcaggccatataaatgagtgcagcaggtttctgattcatattatcataccttaattactcagtttaaatagcgcattgaatgaatgaacatgtgcttgttccaaatatttctgccctaggatcatgttcttgtttgttattatgatataactcagtgatatccttggaaacgtaaatcactagtgatcctttgtctttatgactgcaacaaaacatagcacatgcactgagtaagtatgcatttctggcagacaagccgattactttgcaggaaggtctgctccaatccatcaaggatcgcaggatattggtgcatatggaagagttgaagctgatcatcgcaacttgtccattcttgggaccgccccatatggaggacaacagtcagcttcgttgttgggaggagctcctaggacaaacattgatagcctctcctatgggcaagggtcatcaagcagcggttatgggatgggtctgccccctggacgggactatgcctcagggaaaggtcttctccatccttcttcggattctgattaccgagatagcattttatcccgtgtacatccaggcatctccatggttgatgaacgtgctgttgatcgggttggttatcgtcgtgaactggatctaagagatgaagaacgtcgaagggacctattactggaaagagaaaaggaacgtgaccgtgaacgggaacgagagctgcgagacctacgagatcgtgaaagagagcgtgaaagggaaagggaccgtgaaagactaagagaacgtgaaagagaaagggaacttgaacgtgaaagagaacgtcttcgtgaacgtcgcatgaaggagagggaacgggataggaagcaccctgctgattcaaggagggagcacactccacctagaactcctggtgatcggcggcgttcttcttctgttagagctgagaagcctttgcggcgaccttcacctcggcgtgatgctgtgcataggtggacctccatgttttctctgtagctttgtggatgcaataggttgctgcttcgtctttcgtgcagctttttaaactaacgctttcgtttgttctcctgaaggcatcgttcacctgttaaagaaataaagagagaatatatttgcaaggt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0562700, RefSeq:Os06g0562700