Os06g0563000

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Revision as of 09:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0563000| Description = Ndr family protein| Version = NM_001064413.1 GI:115468557 GeneID:4341312| Length = 4517 bp| Definition = Oryza sati...")
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Gene Name

Os06g0563000

Description

Ndr family protein

Version

NM_001064413.1 GI:115468557 GeneID:4341312

Length

4517 bp

Definition

Oryza sativa Japonica Group Os06g0563000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:22514470..22518986

Sequence Coding Region

22514726..22514947,22515030..22515165,22515258..22515313,22515415..22515471,22515557..22515634
,22515725..22515811,22515890..22515950,22516043..22516131,22516271..22516368
,22516478..22516577,22518791..22518853

Expression

GEO Profiles:Os06g0563000

Genome Context

<gbrowseImage1> name=NC_008399:22514470..22518986 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:22514470..22518986 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgactccggcggctccgtcgtgtcggtggacgtcgagcgcatctccttcggcggcaaggaacatcatatacaaacaaaccatggttctgtatctgttgcggtgtatggcgaccatgataagccagcacttgttacttatcccgatattgcattgaatcatatgtcatgcttccaagggctactattctgccctgaagcatcttcattactgctgcataatttttgtatttaccatatcagccccccaggacatgagttaggagcagctccagtttcaccaagcagtcctgtggcatctgttgatgagttagcggatcaggtttcagatgtacttgatttttttggactgggtcctgttatgtgcttaggtgtcactgctggcgcatacatccttactctatttgcaacgaagtatagggagcgagtactaggtcttatcctagtttcccctctatgcaggaccccttcttggactgaatggtttcataataaggtgatgtcaaatttgctatattattatgggatgtgcaacatggtaaaagactgtttgctacaacgatacttcagcaagggagtgcagggatgctctgctgtacccgaatcagacattgtgcaggcgtctagaagttttctagatcaacggcaaagcatgaatgtgtggcggtttatccacacaatcaatgagagacatgatttaacagaaagcttaaaggagctgcagtgcagaactctaatatttgttggccagaactctcagttccatgctgaggctgttcatatgacctcaaagcttgatgagagatatagtgctctcgtagaggtacaaggatgtggatctgttgtgacagaggagcaaccgcatgcaatgcttatgccgctggagtacttcctcatgggatacggattgtacagaccaagccagataagctgcagccctcgtagccccttgaacccgttttgtatatcgccagaactcctctcgcccgagagcatgggggttaagctaaagccaatcaagacgcgggccaatcttgaagtttag</cdnaseq>

Protein Sequence

<aaseq>MGDSGGSVVSVDVERISFGGKEHHIQTNHGSVSVAVYGDHDKPA LVTYPDIALNHMSCFQGLLFCPEASSLLLHNFCIYHISPPGHELGAAPVSPSSPVASV DELADQVSDVLDFFGLGPVMCLGVTAGAYILTLFATKYRERVLGLILVSPLCRTPSWT EWFHNKVMSNLLYYYGMCNMVKDCLLQRYFSKGVQGCSAVPESDIVQASRSFLDQRQS MNVWRFIHTINERHDLTESLKELQCRTLIFVGQNSQFHAEAVHMTSKLDERYSALVEV QGCGSVVTEEQPHAMLMPLEYFLMGYGLYRPSQISCSPRSPLNPFCISPELLSPESMG VKLKPIKTRANLEV</aaseq>

Gene Sequence

<dnaseqindica>4040..4261#3822..3957#3674..3729#3516..3572#3353..3430#3176..3262#3037..3097#2856..2944#2619..2716#2410..2509#134..196#ggtggtggaggcggagcagcagcggcagcagcagcggcggctgaggcggcggttggtgagcgagcgcgaggagagcgagggaggagaggagaggtgggagggagtggccccgccgccgtcttcttggccggagatgggcgactccggcggctccgtcgtgtcggtggacgtcgagcgcatctccttcggcggcaaggttggtggtgctcctcccccttcttgatttgctcccctggaggcccgatttggttggacgcattggatggaggggagcgccggatgatgggagcttggtggcgggattcagttcggttcttggaagagcttttttttttaatttatttttttgctgagattttggtgtttggctgggtttgggggttccagagagaagggggggcgtttcttcaggtttgtagtagtagtatctttttagcagttgtgttcttgtctgctggttgcattgtgttgtgggtttagatcgaatccaccccgaattcttgtaggatttcaggttgctcgagttcgtttcctgattttgtttttctttttcttgtcgatttcttgctttgggggagtagtatctgactgtgatctgagggggcggttgcttgtggatttttctcatcttttcctgtgattatgactgatcttccactggttcaccgtctgcgtcttgataacatcagagtgataatttttttttctctttggaggtgtccacctggcctctacctatctttctttgtccatggcgaatttcttttcttcgagttttgtggttctcgatttggttgcgtggccctgttagtttactgcttggcgtgctaatcagttaggctaattaatcacctactttgtgtgcttatcaccaagaagaaaaaagaaaagagaggggaacaaaccataaagtattcgattttgatgcttttgggttgttgtttgggtgtcccaactgcccttttttctttggtgtttctttaatttgtagtatcactttttttttattggttgggctttctagcaccaatttcaattaattatctccctgctgataggaagccctttagttgttggaattaaggtccctgttgtgtccagatgtttatccaattttgcttattgatccgtaatcgcaaatttccaaggcaccttaattttgctttattcataaatcgaaagtagttgtagaaaagaattaggttagtcctgcaagtatatctagggtgaaaggccatgtgagtgttcactaagtttcaaacttccattgttgaatttttagggtcacaaatttgtggacaaaatcctaaatctattgcatttttaaactttacactgaatatgctgatagcaacctcttattcagtaccaactgaaactcttctgaaacacacgtacacatacacatacacacaggtcaagggcacctataattctactgccaatgatatggatagcaagcgcattcagtatcatggttactttaaaatattattgtgtatcatctgttaaaaatggttaaatgggtaatgcaacttcaagtccctatcatgcgaagttctttagttattattggttattaaatagggtgcttttgatgtaatcatcatattaacgcttccctgccacttgttgccatagacagatagaaaataacagataaattgcattgccctagccatggttttcctcaaaagtatgcttctattctaccatttgcttgtgaaatggtggaggaatcacttctagtgctctgtttcacctttttcttaggcctaagggatgtggtattggaatcatcactttagcaccacatatcataatggagttattattatccttctgtcactcatcagaccttggccacatttagcatgagtgaaacaacatgcaggaaacagatactcactattcatatccttttttcagtttagagaaacttttccttcaagcatccgggggccactgctagttcgaaatggtcctattacctactagaatgcaaattgcatcataattcctaagcgtcctgagacgcacttgatagtgcagtggcaagggatgtgtggtttcaaccccaaggtcccatgttcaatccccaacacgctcacaatttcttcttaaaaaatgtttggagggacgtctctccctccaaatctcgtttttttttttaattcctaagcatcccataattcactgtagggcatgtaaatagatgccattgctattttctaccatgagcttcacttggttgtagtctcctgctatattttctcctatgttttcatgattttctttggatcaaagtactacatggagaattttctactattggacgtagggctaaggttagtattgttcttaccattttgatcctaattcgtgtgacgctttccttgctttcttcaggaacatcatatacaaacaaaccatggttctgtatctgttgcggtgtatggcgaccatgataagccagcacttgttacttatcccgatattgcattgaatcgtaagttttatagttccatgtagtgccgtaaactatttgaggtggagttgtgtttagttataaaagaattatgcaatatagtcacttatgtccgtatttcttttatcagatatgtcatgcttccaagggctactattctgccctgaagcatcttcattactgctgcataatttttgtatttaccatatcagccccccaggacatgaggttcgtagctgtctctagtatttattatataatgaattatttgatagttgtatttattaagctttgatgcattaggcaatttcagatctatctttttgatgaatgcattgttttattgtcctttgcaagaatcttgcagttaggagcagctccagtttcaccaagcagtcctgtggcatctgttgatgagttagcggatcaggtttcagatgtacttgatttttttgggtatatcttctcaagttatctgaaaaaattgagtcttttagatgtttatcaacattgctgaagtagctttcttgttttttggccttttacagactgggtcctgttatgtgcttaggtgtcactgctggcgcatacatccttactctatttgcagtacgtatttattcaaatgtaatgtgttttgtagtacttgcacaattgtatttaatttatttatattctttgttgcagacgaagtatagggagcgagtactaggtcttatcctagtttcccctctatgcaggaccccttcttggactgaatggtttcataataaggtacctttccaatatctagcctacagtgttcaactttgtgtactacaaatgtagaataataagtcttcaactaacaaattcatttcataggtgatgtcaaatttgctatattattatgggatgtgcaacatggtaaaagactgtttgctacaacgatacttcagcaaggtagcaagcaggattcgtttactccatatgctctttgctgggatgtcctttgaacattttcttgctgtaattttccaacactcagggagtgcagggatgctctgctgtacccgaatcagacattgtgcaggcgtctagaagtgtgcgtactatcgaaaacatttcattgccccttatcaattattgtggttgtttataaatttatgagtttaactttaatctctgttctcttgattcatgtagtttctagatcaacggcaaagcatgaatgtgtggcggtttatccacacaatcaatgagtatgtttccctttttgctttttaaattcttgtatggagcatttagccatttatccaagctgatggaatcaaaactttgtgcttctttccaggagacatgatttaacagaaagcttaaaggagctgcagtgcagaactctaatatttgttggccagaactctcagttccatgctgaggctgttcatatgacctcaaagcttgatgagagatatagtgctctcgtagaggtgcttatttaactgatagtttgatccaacgaaaaaaaaatatgttctttggtttgaaatgtcaatcttgatgtctttgcaggtacaaggatgtggatctgttgtgacagaggagcaaccgcatgcaatgcttatgccgctggagtacttcctcatgggatacggattgtacagaccaagccagataagctgcagccctcgtagccccttgaacccgttttgtatatcgccagaactcctctcgcccgagagcatgggggttaagctaaagccaatcaagacgcgggccaatcttgaagtttaggatcgaaagagaaaaaaaaaaaaggtgaaatgtgagaacttaggctaacccggcagtcgctgtactaatatatcttcctaagttttggaggcgagtgagttggttgttgttattgtgatgtagatattgaggaaaaaagcttaggttgaggcggggtttccattccattggttcgtagcattaaacagctgtaaattgttacagattatttgtcaaagctaaagagaaaataagggaagatgagctgttgccaatt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0563000, RefSeq:Os06g0563000