BGIOSGA036646

From RiceWiki
Revision as of 18:29, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA036646

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036646, complete gene.

LocusTag

OsI_37441

Ensembl Transcript ID

BGIOSGA036646-TA

Ensembl Protein ID

BGIOSGA036646-PA

Length

6607

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:2284263..2290869

Sequence Coding Region

2290823..2290869,2289640..2289777),complement(2289494..2289543,2288862..2288976),complement(2287830..2287878
,2287645..2287734),complement(2286565..2286688,2285837..2286192),complement(2285253..2285639
,2284263..2284538

Genome Context

<gbrowseImage1> name=IndicaChromosome12:2284263..2290869 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:2284263..2290869 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGTCCAAGAAGAACTACTACAAGGAGAAGCTGATGCGGCGGAAAGAGGAGAAAAAGGAAGAACCAGAGACACCTAGGTATCGAGATCGTGCTAAGGAGCGCCGTGAAGATCAAAACCTTGACTATGAACCTACAGAGCTTGGTTCATTTCATGCTGTGGCACCTCCCGGAGCAGATTTAAGGCTAGCAGATGTACACAAGATATCTATTGAGAAAAGCAAATATCTTGGAGGTGATTTGGAACATACACATTTGGTCAAAGGTTTGGACTATGCTCTACTTCACAAAGTACGAAGTGAAATAGAAAAGAAGCCTGATGCAGAGGATGGGAAGGATACACAGACAAGGTCAACAAAAGAAGATCAGGCAGTCTCATTCCGCACTGCAACTGCAAAGTCTGTCTATAAATGGATCATAAAGCCACAAAGCATCATAAAGTCGAATGAAATGTTTCTTCCTGGTCAGATGGCATTTATTTACAACATGGAGATGGTAACTGTCAGTGTGGATGGTTCTGTACTTGATAGGATTGCTAAAATCATGTCATACCTTCGACTTGGATCATCTGGGAAAGTCTTGAAGAAAAAGAAAAAGGAGAGGGACACAAAAGGGAATAACAGTTTAGCAAGTGGTGACTATGATGAGGTAGCCAGACCTGGCCAAACAGGTTCTTCTCTGAAACATCAATTTCAAAAGGACATGCCTCCGCCGCCACCCCCTCGAAATAATAACTTAAGCAAGAATGAGGAACAGTCTATTCCTGTTGCTAGAGCAGATGAAGATGACATTTTTGTTGGAGATGGAGTTGACTATTCTGTTCCTAACAAGGAAATGAGCCATAGCCCTGTCTCTGAAGATATGGATGAGTCCCCACATAACCATCAAAAGCAGTCCTATTTCACTGAAGAGAAACCTGTCTATGGGCCCATCCCACCATCGGACCCTGCTCAAGCTTGGCCACAAACGAATGGATACGATGCTATTCAAGCTCAAATGGTAGCTGCTGGATATCAAGGGGAGTGGTCAGGCTATCAGTATGGTGAACAACAGATGCCTTATCCAGAACAGTACATGCAACAAAGCACTCAGGACTATGATGTATTAGCTGATCCAAATATAGCCCAGGATCCAAGGTTGATGACTCAAGCAGATAAAGATAGAGGTCTTGGTTCTGTTTTCAAACGTGATGATGAAAGGCTTAAGCAGCTGAGGGAAAAAGATTCACGGGAGAAAGATCCTAATTTTATCTCAGATAGTTACTCCGAGTGTTATCCTGGTTATCAGGAGTATAATCATGAGATTGCAGGCAGCGATGAAGAAGATGATTTGTCGAAGATGGACATGGGTGGCCGGGCTAAGGGGCGTCTTCATAGGTGGGACTTTGAGACGGAAGAGGAGTGGGCCAAATACAACGACCAGAAGGAAGCGATGCCGAAAGCTGCATTCCAGTTTGGAGTGAAGATGCAGGATGGCAGGAAGACGAGGAAGCAGAACAAGGACCAGAAGCTCACGAATGACCTACACAAGATTAACAAGATACTTGCGAGGAAGAAAGGTGACAAAGATGGAGGGGATGATGGTGGGCATTATGATGATGATCTACCTAGTGGCAAGAAGCAGCGCGCCTGA</cdnaseq>

Protein Sequence

<aaseq>MSSKKNYYKEKLMRRKEEKKEEPETPRYRDRAKERREDQNLDYEPTELGSFHAVAPPGADLRLADVHKISIEKSKYLGGDLEHTHLVKGLDYALLHKVRSEIEKKPDAEDGKDTQTRSTKEDQAVSFRTATAKSVYKWIIKPQSIIKSNEMFLPGQMAFIYNMEMVTVSVDGSVLDRIAKIMSYLRLGSSGKVLKKKKKERDTKGNNSLASGDYDEVARPGQTGSSLKHQFQKDMPPPPPPRNNNLSKNEEQSIPVARADEDDIFVGDGVDYSVPNKEMSHSPVSEDMDESPHNHQKQSYFTEEKPVYGPIPPSDPAQAWPQTNGYDAIQAQMVAAGYQGEWSGYQYGEQQMPYPEQYMQQSTQDYDVLADPNIAQDPRLMTQADKDRGLGSVFKRDDERLKQLREKDSREKDPNFISDSYSECYPGYQEYNHEIAGSDEEDDLSKMDMGGRAKGRLHRWDFETEEEWAKYNDQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLTNDLHKINKILARKKGDKDGGDDGGHYDDDLPSGKKQRA</aaseq>

Gene Sequence

<dnaseqindica>1..47#1093..1230#1327..1376#1894..2008#2992..3040#3136..3225#4182..4305#4678..5033#5231..5617#6332..6607#ATGTCGTCCAAGAAGAACTACTACAAGGAGAAGCTGATGCGGCGGAAGTAAGTATCATTTCACTTAGAAAGATGTAACTGATTCGAGGTAGAAACAAAATCTGTATGTTTTGGGACTGTAGGAGAAATTTATTAAAAGTAGATTGTCAAAAAAATAAAAAGAAGAAGTTGCAACATTTTGATGGTATAGTTACTGTTTGCTTGTAAAATAGTTTTTGAGATCCAGATTCTATGTAGTAGTATGGTGTCATGAATTTTTGTAATCAAAACAAACGACTGAAGTCGTTGTTCTTGCAGTTAATCTTATAGCCACCTTGTTAGACAGTGATTAGGGTCTAAAGAATCATGCAAGTGACCTGACTCACTGAACCATCCCACTTAACTAGATCTTTCGTTCACTTTCAATACACTGCCTTGCATTACTATAAAAAGAAAATAATTAGGTGCAGTGGTGATTCCTTTACCAATCTGAAAAAAATTACCCGACTGCCCTTATGTAATGTCTGTATTGTAGACTTGTAGTAGTACTAGTCTTCTATATCATATTTTGTTGTAGGAGTATATACATATCACAAGCTGTTGATCCAGAAGAACAGCGTTTAAATGATAAACACTAAAGTGCTAAACCAAGGAAGTTTTGGAAATCTAGGATTCATGCTCTCCTTACACTTAGGGGAAGTGGCTATTGGTACTCAGATCCATTGTAGTCATAGGAGGATAATCCATGCCCTTTTGGCTGCATTTCAAGTCAAGTTTGCAGAATCTGTAATCATGTCAAAGCAGGAAGTGATAAACTGATTGATTAATAGAAATCTTCTTCTTCGACCTAGAATGAGTTTTTGCACACCCGTGGGTCTGGCTAAACCAGAGACTAAACCTGGCCACCTAAGTACCAGTTTTTTGTGCACTTAATAAAAATCCCCATTTTTTTTACTGGTGTGGCCCTGACACCCTGTCATCTCTTGCACTGCTCCACTAGGATGGGAACCCCCCACTGATAAATCAGATGCAACTAAAACTACTTCCGGCATTTTAGGGTTTTAGGGAGCAAGTCAATTTGGCTAACCTAATTCTCCCTTATTTTCCCATGCAGAGAGGAGAAAAAGGAAGAACCAGAGACACCTAGGTATCGAGATCGTGCTAAGGAGCGCCGTGAAGATCAAAACCTTGACTATGAACCTACAGAGCTTGGTTCATTTCATGCTGTGGCACCTCCCGGAGCAGATTTAAGGTAACAGACCACAGGTCTCATTTGGCTGACATTTTCTTTGCTTGGTTTATTATATGCTCTTCTGGAACTCAACGTCTGCAATTTTTCGTATTACAGGCTAGCAGATGTACACAAGATATCTATTGAGAAAAGCAAATATCTTGGAGGTTGGTAGTGCAACAGTGTTATACTCTTTCCTTGTAAGAAAATGCTTTTCATCCTTTTGGGAACAATTTATGTTGTGACTTGTTTTTTTAAACACTTCATTTATGTATAGACAAATGCTCATAGATCTGCACAAACGGTTAAAATTCTAACATAGTTTGGTTATGACATCTGTGGAAATGAGAATTTGAATCTTTCTTTGGAACTGTTTTATGTCCACAAACTTGTCGCGGTTTCAAATAGCTGCTTGATTTTTAGGTTCCTTTTTAATTTGAAATATATAGAGCTATCATATACTTGGTATTTTGACCTAGTCAGTCAGTAGTATGCAGTCAAGGAATGAGGTTCGATAGCTCAAAACTAAAGGTGGATAGTTCAGTTGGACATGTTTTTTAAGACTATGATATATTGTTGTAGATTTGGAGACTTAGATGGCTGGCACTTTTTCTTTAACTTTTTTTTGTCTTTCTTCTGAACTATCATGTTGATTGATATTTAATTTCACTTTGTGTCTTAAAGGTGATTTGGAACATACACATTTGGTCAAAGGTTTGGACTATGCTCTACTTCACAAAGTACGAAGTGAAATAGAAAAGAAGCCTGATGCAGAGGATGGGAAGGATACACAGACAAGGTATTTCCCACAATACTGCAGTTTTAGTTTCATACCATTTGATCATACCTTTTTCCTGGTAGTTTTGTACTCCCTCCATCCCAGGTAAAACTGAATCCTAGAAGCCCAATGCAGTTTTAGTCCAAGCAACAAAAGACCAAAACACCCTCATCAAGTACAACCATGATTAGCACTTTTCATAAAAAAAGTTCCTGCGAAATTCGTGCCCAACTACTTCCTCAGCCTCCCTTCACTGGAGATGATGCGTTGATTTCATTTTTTTAATTCACCCGGTGGGTGGTGGACAACACAACACAGGGAAAATGATAAAGATGCAATTAGTGTTTCTCGATCTCTGGCATAGGAATCGATTTATTGTGGGACAAATGATCGACCCTAGGAATCAAATTTTTGTGGGACGGAGGGAGTAGTCATATGGATTAAGGACAAGCTGTCAGATCCATGCTTCATTTCAAATGCTGTAATATATTACAGTGATTATCACTTGCATAATTTTTAAGAAAGTGGGGAGTTGATTCCAATAATTATTATATGACACAACAAATTGTCAAGCTTTTTTAGGCCTAGTCCTCCTTGTAACTGTGAGGTGAAGTTAAGAGATATCCATTTTTCTTTTGTTAGAATTTTAGTAGGTGTTTTTATGGTGGATGGTTTCCTATTTTCTTTATGAATACTGTCGGGCAGAATTATTCTGTGCATTGGAATTATTTATAATTTTGTTATGCTTTATAGTGGCCGCTGGATCATTCTCAGTTAAACATGATTTCCTGTACAGTATTAAATCTGGATTTGTATTATCTTAAAAAAATCAGGACTGTCATTGGAATAATACAATAATTGTTTATAAGCATTTCATGATTTGGGATGTAGCACTATGAAGTTTGGCCTCATGTCCTTCATCCTTGTCTGGATGCACATCGTAAGTTAGTATTTAACTAGGATACACATATTTGATATTTAACCTGTGAACTTGTGTTGTACAGGTCAACAAAAGAAGATCAGGCAGTCTCATTCCGCACTGCAACTGCAAAGGTGGATTTCCTTTTAATTTATAAAAGAATTGGTGTTTGCTTCTTCTATTATCGACCATGTAATGGACACTAAAAGCAATTATTGGTTCATTGCAGTCTGTCTATAAATGGATCATAAAGCCACAAAGCATCATAAAGTCGAATGAAATGTTTCTTCCTGGTCAGATGGCATTTATTTACAACATGGTACCTCCTTCAAAGTTCCCCATTTTAGTGCTTTCTGTATGTTAATTACTTTTATTTTTGTGGTGGTGGTGACCATTTTCCTTAATAAAATGATATGTATATTATTTTATTTTCATCACTCATCAGAATTCATCCGTACTAAACATGATGCTACTATTTTGTAAAAAAATGTTATTGCTATTTCAATTTCTAATTTGTCAACTCTATGCTAGCATGTAGTAAATGATAACATGCTTATGTTTTATCAGCTTTTATAATATGCGTGATGCATGCCTATGTTTCATGATATATTATTGTCTGTTTCTCTGCTCATCATCTGGAGTACAGTAATCAACATGCTCAAGCTCTCAATTAACTTCGCAATATGCAAACAAGAGAAGAAAGAGAGGAAGGATGAAAAAAACTCTTCCAATATTATATTAATAGACTATATAGTATTGCTGTTACATGCTTACATATCTGCAATGATTTTTATGTTGTGCACATTTAAATTGTGATTGTGATGCATCACAGCTTCAATGATTACTATATGCAGAACCTTCATTATGACCACAATCCAACTTACATGTCTGAATTCATCACTAGATCATATTTTTGATGCTAATGGTTTCATTTGCTGGATTCACCCTTCCAAATGATTTTCTGAGAGTAAGAGTAATGGTGTTTCATCACCTATTCTCATCATCTCGTAGCATGTCCAGTACTATTGATTGATGCTATTTGCAAATAATTTTTTCCATCATTCCTGCTTTGATTTGAACTATGGGTTTTAGCGGAAGAGTAATTAATTTCATTAATGAAACCCGGAGGATGGACTTACCAATGATATCCCAACAACTCTTCACAGGAGCAAAGCTGATTGCGCTGTTCCAGAGGTATTATGGCAATACATCATATACCACATTGAAGTTTCCCGAAACTTATCATTTTCCTCAGTATTCTTCTTGCTTCTGCAGGAGATGGTAACTGTCAGTGTGGATGGTTCTGTACTTGATAGGATTGCTAAAATCATGTCATACCTTCGACTTGGATCATCTGGGAAAGTCTTGAAGAAAAAGAAAAAGGAGAGGGACACAAAAGGTATGTTACTTGAAAATTGAAATGGATTTTGTGCAGTGGAAGTTGACTGAAAAACTAAGTGACATCAGGAAAATATAAAATGATTTGTTTGGAAGCTGAGCACTTACATTGTGAAAAAATAGAAAAGTATTATTTGGTACTTTTTGCCACAATGGTTGAGTCTTGTTACAATTGATTTATAGTCTTCTGTCAATAATTTAAGTTTGGGTATTTAAGTTATGACCATATGTTACACGTTTACTTTAGATTCTGAACGGATTAATTAGTTCACTTAATGTATTTGCATGTATGTACTCTCTCATCCATATCTGCACTTGCTTTGCTCGATGAAATTAGATTATCCTGATTCTTGTTATGCTTGTTATATTGCAGGGAATAACAGTTTAGCAAGTGGTGACTATGATGAGGTAGCCAGACCTGGCCAAACAGGTTCTTCTCTGAAACATCAATTTCAAAAGGACATGCCTCCGCCGCCACCCCCTCGAAATAATAACTTAAGCAAGAATGAGGAACAGTCTATTCCTGTTGCTAGAGCAGATGAAGATGACATTTTTGTTGGAGATGGAGTTGACTATTCTGTTCCTAACAAGGAAATGAGCCATAGCCCTGTCTCTGAAGATATGGATGAGTCCCCACATAACCATCAAAAGCAGTCCTATTTCACTGAAGAGAAACCTGTCTATGGGCCCATCCCACCATCGGACCCTGCTCAAGCTTGGCCACAAACGGTAATCCAGCTAGTGTTTAGTAACTCCGGTTCCATTGTGCTTAAAGTAAAATTTGAGCTATGCATGTCCACTGTTCAAGACAAACTAAATTTTTTTTTTGCCCATAGTTGTACCTTCTACTGAAATAGCCATTAATTATTAGTATGTTCTATTCTTGACCTGTATTTCCTAAAGGTTAATGCCTCTTATGATTTCAGAATGGATACGATGCTATTCAAGCTCAAATGGTAGCTGCTGGATATCAAGGGGAGTGGTCAGGCTATCAGTATGGTGAACAACAGATGCCTTATCCAGAACAGTACATGCAACAAAGCACTCAGGACTATGATGTATTAGCTGATCCAAATATAGCCCAGGATCCAAGGTTGATGACTCAAGCAGATAAAGATAGAGGTCTTGGTTCTGTTTTCAAACGTGATGATGAAAGGCTTAAGCAGCTGAGGGAAAAAGATTCACGGGAGAAAGATCCTAATTTTATCTCAGATAGTTACTCCGAGTGTTATCCTGGTTATCAGGAGTATAATCATGAGATTGCAGGCAGCGATGAAGAAGATGATTTGTCGAAGATGGACATGGGTGGCCGGGTAAGTGAGAGTACTGTATTCTGAATGCTTTTTTTTTTCCTGTTTCCCTTCACAATAGCAGACATAACTTGCTTTTGCGGAATTCTTGAGCTCATGTTTACTGTACTTTTTAAAAAATATTTTACCATCTATTTCCAAATTCGTTCTAATATATTTTTCTTTTATGTAAGAAGGTAGAGCCAGCTCTACCTCATAGCCATTTCATTGATAGAAATGAACGGTTACAGAGTTGCCTGAAGAAAGGTGAAGCAGGAAAAAAAGAAAAAAAAGGGAAAGGAGATAGAAGGAGGAAAATATACAAAAAATTACAAGAAGCTAAAATTACATTAACCTCATCTGATTGTCTCAGACCAGAGATTGATTTTTGCTCTGGTGTTGGGATTGGCCCGGTTACTCCATAGTTCTAGAGCATCGATGATTTGTTGAATTATGTCTGAAATACCAGTTTGCCATCTTTAAAAAATCCTGCTGTTTCTTGATTTCCAAAGTGTGTGCATAGGCTGCAAACCAAGTGGGTTCTATGCCCTGATTGTTATGATAGCTGACAGTAACTTTCTCCAAGAAATTTGGGGCTGACTCTGCCAAATTACATAGATGTAAAAGTCCAAATTTCTCCTATAAGCTTGTAGCTGCCTTGCATCTCTTAGGATGATATGGTCCTTGATTGACTCTGCCAAATTCATTCTAATGTATGATACTATGATTCCTTTGCAGGCTAAGGGGCGTCTTCATAGGTGGGACTTTGAGACGGAAGAGGAGTGGGCCAAATACAACGACCAGAAGGAAGCGATGCCGAAAGCTGCATTCCAGTTTGGAGTGAAGATGCAGGATGGCAGGAAGACGAGGAAGCAGAACAAGGACCAGAAGCTCACGAATGACCTACACAAGATTAACAAGATACTTGCGAGGAAGAAAGGTGACAAAGATGGAGGGGATGATGGTGGGCATTATGATGATGATCTACCTAGTGGCAAGAAGCAGCGCGCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036646