Os06g0567900

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Revision as of 09:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0567900| Description = Similar to L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO)| Version = NM_001064435.1 GI:115468601 GeneI...")
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Gene Name

Os06g0567900

Description

Similar to L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO)

Version

NM_001064435.1 GI:115468601 GeneID:4341337

Length

3038 bp

Definition

Oryza sativa Japonica Group Os06g0567900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:22828213..22831250

Sequence Coding Region

22828295..22828296,22828372..22828573,22829869..22830195,22830411..22830686,22830918..22831250

Expression

GEO Profiles:Os06g0567900

Genome Context

<gbrowseImage1> name=NC_008399:22828213..22831250 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:22828213..22831250 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcgacggtggaggtgacgtgggacgtggagtacgtactgtgggcgccggactgccagcagcgggtgatgatcgggataaacggcaggttcccggggcccaacatcaccgcgcgcgccggcgacgtgatcagcgtcaccatgaacaacaagatgcacaccgagggcgtcgtcatccactggcacggcatcagacagtttggcacgccgtgggcggacgggacggcatcgatatcccagtgcgcagtgaacccgggcgagacgttcgtctacaagttcgtcgccgacaagccgggcacctacttctaccacggccacttcgggatgcagcgcgccgcgggcctgtacggttccctcatcgtcctcgactcgccggagcagcccgagccgttccgccaccagtacgacgacggcggcgagctccccatgatgctcctcagcgactggtggcaccagaacgtctacgcccaggccgccggactcgacggcaaggacaggcacttcgagtggatcggcgagccccagacgatcttgatcaatgggagaggacagttcgagtgcacgctggggccagcgaggaagagctttgagaagctcctcaacgagaacgtggagacctgcgtcgacgaccagaagatgtgcagcgaccaggagaagtgcctgaggaggagcgagtgcgggccgtactgccccaggagccagtgcgcccctgtcgtgttcaatgtcgagcaggggaagacttaccgccttaggatcgccagcaccacctccctttctctcctcaacgtcaagattcaagggcacaagatgacggtggtggaggccgacgggaaccacgtggagccgttcgtggtcgacgacatcgacatctactccggcgagagctactccgtcctcctcaaggccgaccagaagccggcgagctactggatctccgtcggcgtcagggggcgccaccccaagacggtgccggcgctcgccatcctcagctacggcaacggcaacgcggcgccgccgccgctccagctgcccgccggcgagccccccgtgacgccggcgtggaacgacacacagcgcagcaaggccttcacctacagcatcagggcgcgcaaggacaccaaccggccgccgccg</cdnaseq>

Protein Sequence

<aaseq>MAAATVEVTWDVEYVLWAPDCQQRVMIGINGRFPGPNITARAGD VISVTMNNKMHTEGVVIHWHGIRQFGTPWADGTASISQCAVNPGETFVYKFVADKPGT YFYHGHFGMQRAAGLYGSLIVLDSPEQPEPFRHQYDDGGELPMMLLSDWWHQNVYAQA AGLDGKDRHFEWIGEPQTILINGRGQFECTLGPARKSFEKLLNENVETCVDDQKMCSD QEKCLRRSECGPYCPRSQCAPVVFNVEQGKTYRLRIASTTSLSLLNVKIQGHKMTVVE ADGNHVEPFVVDDIDIYSGESYSVLLKADQKPASYWISVGVRGRHPKTVPALAILSYG NGNAAPPPLQLPAGEPPVTPAWNDTQRSKAFTYSIRARKDTNRPPP</aaseq>

Gene Sequence

<dnaseqindica>83..84#160..361#1657..1983#2199..2474#2706..3038#tagctcacttccaagagcctcgtgacacacaccactcactatactggcccctcctcctcctcggagatcgagccggccagccatggcggccgccgtgcagctgctcgtcgtcgccgccgccgccgccatggcggcggcgtgctgcgccggcatggcggcggcggcggcgacggtggaggtgacgtgggacgtggagtacgtactgtgggcgccggactgccagcagcgggtgatgatcgggataaacggcaggttcccggggcccaacatcaccgcgcgcgccggcgacgtgatcagcgtcaccatgaacaacaagatgcacaccgagggcgtcgtcatccactggcacggcatcagacaggtactagtacactctactggtagcatagtgaccggacaaagttttacaatcatacagttccttcttttttttttttcaagtcgaaaccaacgttatactttctccatataaaaaaaatatatgagattttgggtggatgggacacatcctagtgcaacgaatctgaaccgtctatccacccaaaatcccttatatattaagacggagagagtatatagttattcggtccatactagaatataataacttcttatgtttaatataataacttcttgtgtttaactttttattaaaatataatattttatcttaaaatataacaactttatcgatataacttgacaaatgtatatacttcctccgtttcaaaatgtaagtcattctaacttttcccacattcatattcatgttaataaatctagataaatatatatgtattcgttaatatcaatatgaatatgggaaatgttagaatgacttacatgtgaaacggatggagtacatggattctctttagtctcagcgaatcataagtatttctctttttttctctatctactttcacatatcaactaatcattatcattagtcatataattttatttactttattaatctagtgtcaccgcctcgaactggccactggttttctagcaacccctaaaacaggaaaacacgaagaagattttatttttgaacaggaaaagctcaaagtaaattgtcgtgtgtttgaaaagaaaaggcacaaactaataaagcgggtctatctggattctggaaccacccacactgcaccaccgtcagtgtcgcttccgaagttgcgagaaacaactttgctttagaataacttgttctctttttaaaaaaatacagtttgtgaaaaaaaaatcgtagtttaacttaactttgtaacagagtataagccctactctgcttttatattttccttttatgcactaaccagctcgagcacagcctaaaacttaagaaaaaaaattatgattcttaagaggcatggagaggtattaataacttttgaagtatagttttttttatcttctcgtagtattgagaagtggcaaattttgtacttaactgtgtaaaaaatagtacctctcattttcttctcaaagaactataaatttactcaaaacaacataaactgagtagaaactagaaaggtcatgcattttacttactataacagtaatctaaactactacacaactacgagttttataattctagaatgaatataatgaaaaatgatgtaaaatcaattaccacgcatgcagtttggcacgccgtgggcggacgggacggcatcgatatcccagtgcgcagtgaacccgggcgagacgttcgtctacaagttcgtcgccgacaagccgggcacctacttctaccacggccacttcgggatgcagcgcgccgcgggcctgtacggttccctcatcgtcctcgactcgccggagcagcccgagccgttccgccaccagtacgacgacggcggcgagctccccatgatgctcctcagcgactggtggcaccagaacgtctacgcccaggccgccggactcgacggcaaggacaggcacttcgagtggatcggcgagccccaggtaaataaaaaaacacatcgccgccgtcgtcatcgtcgccgccatctccggtgatagagaaccatgtcgataaagaaggcacgatgggtcacccgtgccttcaggccggcacggcacggctcgactcgcctcgggccgtgcctagcccgtgtcgggcggcccttatggccatctataccggtgagtgctaacagttagttttttgcaaattgtagacgatcttgatcaatgggagaggacagttcgagtgcacgctggggccagcgaggaagagctttgagaagctcctcaacgagaacgtggagacctgcgtcgacgaccagaagatgtgcagcgaccaggagaagtgcctgaggaggagcgagtgcgggccgtactgccccaggagccagtgcgcccctgtcgtgttcaatgtcgagcaggggaagacttaccgccttaggatcgccagcaccacctccctttctctcctcaacgtcaagattcaaggggtaagataattcaatgttttttatggattgtattttttagattgtacgaaagacgcacgtatactatcatgatgtataataagggagcataaatgtaagtatactgatttaatcacgctcgaaaatatatgaatgagtgtcggtcatcatcttcaacagtagcttgatgtgacttgttgtaacaatttcaatgaaattgaagaaattttgcaaatggtaaaattttggcagcacaagatgacggtggtggaggccgacgggaaccacgtggagccgttcgtggtcgacgacatcgacatctactccggcgagagctactccgtcctcctcaaggccgaccagaagccggcgagctactggatctccgtcggcgtcagggggcgccaccccaagacggtgccggcgctcgccatcctcagctacggcaacggcaacgcggcgccgccgccgctccagctgcccgccggcgagccccccgtgacgccggcgtggaacgacacacagcgcagcaaggccttcacctacagcatcagggcgcgcaaggacaccaaccggccgccgccg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0567900, RefSeq:Os06g0567900