BGIOSGA036754

From RiceWiki
Revision as of 18:30, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA036754

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036754, complete gene.

LocusTag

OsI_37242

Ensembl Transcript ID

BGIOSGA036754-TA

Ensembl Protein ID

BGIOSGA036754-PA

Length

6490

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:1053395..1059884

Sequence Coding Region

1059700..1059884,1055975..1056108),complement(1053395..1055910

Genome Context

<gbrowseImage1> name=IndicaChromosome12:1053395..1059884 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:1053395..1059884 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTCATCGCCTCGAAGGTCCTTGGTAGCTCGGACAACTATCCCACGAAGGGCAACTCTGACGCATCGCCCTCCTCCCCCTTCGCCTCCACCTCCACGCCATGCAGCCGCGGCGGCAACAACGACGACAACAAGGACACGCACCGCTCCTACCCTCTCCTCCCTCTCCTCGCTCGGAGCTCGCTTTGCCCAAGAAACAACATTTCCATGGAAGCTCCTAAGCTTCGTTTCGTCAGATGCCCAGGATGCCTCCAGCTTCTTGTGGAGTACCCAACCATTGCTGTCTACCAGTGTGGTGGCTGTGGTACTGTTCTTAGAGTTTTGATGACTAGTGGTATCTACTGTGCAGCGAAAAATCGAGTCGCGCCAGCAACTAATACTAATGCAGAATCTGGTGAGCACAATGAATTTTCAAATATTTCAACAGGGGATTCTCAGAACAACAAATTGATCTGTACAGATGGGCAGAAAATTTCACCATCCTCCAATGCACAACCTGGTGTGGTGCAGGAGAAGATTACCTTTGCTAGCGAGGAAAAAACTGTGTCCACTAGCAATAGTATCGACTCCAATGAGCATGTTAACATCGAGTGTTCCTTATTTGATGGGGATGCCAGCAATCATGATGTGAGGACTGAAGGCATAAATGATGAAGATAAAGTCACTGTGTCTAATTCAACTCTTGATTTAGTGAGGAAAGTAGAGAATGTTGAAACCGATGGAAATGAAAAAGGTTCCTTTACGGATGATGGGAGCATCAGCAATGAAGTTGCTACCACCCAAAGCATGGTCCACATGGATGGAGCTGGTTTTGATAATAATTTTACAGAAGTACAGAGTGCAGCTGAGGGGAAGTGTACACTTAGCGATGCTAATCTGGACTCACAAGAGATAGTTGCGATTTGCCAACCTGATAACATTTCTGTTGGCACAAAAGAAAGGGTTCAGCTATATGAAGGTTTTCATGTTGAATCACATGAAGATCTGATTGAAGAATTGGTGAGATCTCTTTCACTCAGTGACGACGAAGAAGAGTTTGTCGATATAGCAGAAAACAGTGAACTTAATGATGCTTTACGTTCTCAAATGGGCAGCTGCAGATTTTCATTGGGGAGCAAAATGAATGATGGCCCTCGAACTGATCCTCATGGCCGGTTAATCGAAGAATTAGAGATGTCTTTCAGTGATGCTGAAGAACCACTAGACCAAAATATTATGGTCTCCCTCAATGACATAGAAAAGCCTATTTTAGATGAGGTCAGTAAAGAAAATCACATTTTGGAGGAGGATGGTAAAGAAAGTCACATTTTGGACGTGGATGGTAAAGAAAGTCACATTTTGGACGTGGATGGTAAACAAAACCACATTTTGGACGAGGATGGTAAAGAAAACCACATTTTGAATGAGGATGATAAGGAAAACCTCATTTTGGATAAGGGCGGCGAGGACACTTTGGATGCAGGTGGTGCTAATTCATATGAAGAAAGAGTATTGCCATCAGATGATGGGCTTCTCAAATCTGGACAAAGTTTCCAACAATGTGAGCTGGCTGCTGTTAACATGGCAGAAAAGGATGAGGGGCATCTAGAAGAAACCAACATGGCTAACCATGCTGAAGCAAACAGTGGAACTGCTGCTGTTCTTTCAAATTTGTCAAACGATAAATTTTGTGCCATATTACCACCTAGCTGTGATGGGAGAAAAGAAGAAAAATCTAACATACATAGAGGTAGAGAACTCTGTCAAGGATTGTCACTTGATTCTGTAGACTTCCGATCAATCCAAAATTTTATCGAGTCTCAAATGGATGGGACCTCAAGTTCTCTTTCAAGTGGCTCTCCAAGTCATGGTGACCTGGAACATAATAGATCAAACAGATTCAAGAAAATTGATCGACTTGAGCGCCTGAGGAAGATGGATGATCTAAGAGATCAGTTAAATAGGCTTTCTAGCCAGAAAGGTTTGGAAAATAGGTACAAGAACAAAGGCCCTGGACTCCTTCAGGAACAGATTAGCTACAGACACCTTGAACAACATCCTTGTGGTTTGGATGGTGATTCTATCCTGGATTCTGATATTATCGATTCCTATTATGATCAAGGAAATCCACCAAGGTACCCACCACCAGATCCGTTCTCCCCAACTCATTCGCACTATCATTGTGGACATGGGCAACCCCATATCCCATATAACTGCAGTGCATGGGAGTTTAATTCATATTATCAGTCCTCATATGCGGGAAGTACAGTTCTTGAACACGAGTCACTTCGCTCGAGCTACAAGGAGCAGAAACGTGCAGTGAGGAAAAGCATTCTGCGGTCTCTGTCTGGTGCTTCCCCATTTACCATCTGCAATGGCTGTTTCAATTTGGTTCAAGTGCCATCAGACATCTATGTATCGAAAAAGAAGATCGCTAAGTTCCAGTGCGGTCGGTGCTCCAAGGCCCTTATGTTATCATTTCCTGCTACAAATAGTGAAGATGCAAAGCTCAGTAATAAGGAAGTAAATCGAAAACCAAACAAGCCTGTCCACAATAGTGTTGTTGGTATGGAGGGTGGCTATTCTTTTTCTGCTGAATGCTCACGAGGGGATCCTGTGAGCATAAGTGAAGAATGTGGAGCTTCAATCTCAAGAAGCTTCTCTGGTAGAACTAGAGCAGCTGTTGCTGCATCAGGAAGTGGAAAAAAGGTGTCAGACTCGGCACTTCATCGGCTCATGGGGTATGATTCAGCAAGCCAGTTGTTACGGCGGAGCAGAGCATTTGACGATGGATATGACAGTTTTGAATCCATGGTGCCAGTATCAAACAGAGTATCCAGAAGAAAGAATTTGTGA</cdnaseq>

Protein Sequence

<aaseq>MVIASKVLGSSDNYPTKGNSDASPSSPFASTSTPCSRGGNNDDNKDTHRSYPLLPLLARSSLCPRNNISMEAPKLRFVRCPGCLQLLVEYPTIAVYQCGGCGTVLRVLMTSGIYCAAKNRVAPATNTNAESGEHNEFSNISTGDSQNNKLICTDGQKISPSSNAQPGVVQEKITFASEEKTVSTSNSIDSNEHVNIECSLFDGDASNHDVRTEGINDEDKVTVSNSTLDLVRKVENVETDGNEKGSFTDDGSISNEVATTQSMVHMDGAGFDNNFTEVQSAAEGKCTLSDANLDSQEIVAICQPDNISVGTKERVQLYEGFHVESHEDLIEELVRSLSLSDDEEEFVDIAENSELNDALRSQMGSCRFSLGSKMNDGPRTDPHGRLIEELEMSFSDAEEPLDQNIMVSLNDIEKPILDEVSKENHILEEDGKESHILDVDGKESHILDVDGKQNHILDEDGKENHILNEDDKENLILDKGGEDTLDAGGANSYEERVLPSDDGLLKSGQSFQQCELAAVNMAEKDEGHLEETNMANHAEANSGTAAVLSNLSNDKFCAILPPSCDGRKEEKSNIHRGRELCQGLSLDSVDFRSIQNFIESQMDGTSSSLSSGSPSHGDLEHNRSNRFKKIDRLERLRKMDDLRDQLNRLSSQKGLENRYKNKGPGLLQEQISYRHLEQHPCGLDGDSILDSDIIDSYYDQGNPPRYPPPDPFSPTHSHYHCGHGQPHIPYNCSAWEFNSYYQSSYAGSTVLEHESLRSSYKEQKRAVRKSILRSLSGASPFTICNGCFNLVQVPSDIYVSKKKIAKFQCGRCSKALMLSFPATNSEDAKLSNKEVNRKPNKPVHNSVVGMEGGYSFSAECSRGDPVSISEECGASISRSFSGRTRAAVAASGSGKKVSDSALHRLMGYDSASQLLRRSRAFDDGYDSFESMVPVSNRVSRRKNL</aaseq>

Gene Sequence

<dnaseqindica>1..185#3777..3910#3975..6490#ATGGTCATCGCCTCGAAGGTCCTTGGTAGCTCGGACAACTATCCCACGAAGGGCAACTCTGACGCATCGCCCTCCTCCCCCTTCGCCTCCACCTCCACGCCATGCAGCCGCGGCGGCAACAACGACGACAACAAGGACACGCACCGCTCCTACCCTCTCCTCCCTCTCCTCGCTCGGAGCTCGCTGTACGCTGGGGCTCCTCGTGCACGGGCTAGAAGCAGACAGGCAAGCGTGTCGCCCGTGGCTCAGTAGTGGCGGGCAGTGCAACGCGCGAAGAGGCTGGACCACTGAAGTTTTGATTCGGCCTCCGACACGCCTTCCTTCTCCTTTGCGAGCTCCGCTTGGCCTCCTCCTTAGCTACCTCCTCCTCGCCTGTCGCCTACAAAAGCCACTGTCGGCCGTGCGTGGCCAAGGGAGAGGGAGGGGTTGTGCTGGAGGGTGACGGTGACGATGCTCGAGATTGACATCCGCCGCCGACCGCATCTGGGGAGGAAGAGGGGAGAAGGGGAAGGAAATGCCACCACCCACCGGCCACATCTGGGGAAGAAGAAGGGAAAAAGGGGAGAAGGGGAGGAGATAGAGAAGAGAGAGAGGATGAGGTGGAGGAAGTGGGGTCCACTGACATATGGGTCTCACTATTATTTTTTAATCTCATTGTTTGACTGACATATGTGTCCATATATTTTGTTTTAATTTTTAAATTGTCAGATTTTATTTCATGTGACACGTCAGATGAAAACCGAGTCAAATTAGTCATATAAGCGCCATGCCAGTTGAAACCACCTTGGGACCTATATTGCATCGGTTTTAACAGTTGAGGACCTGTTGTATTTGGGTTGTATTTGGTATTAGGTTTTAATAGTTGAGGACCTGTTGTATTTGGTATTATGGTTCAAGAACGAAAATCGAACTCGCTGTCAAAAGAGGCCTAGACTGAACTTATTCGTTTGATCTAGTAGTAATAAACTAGTAATTGTCTTTGGCCCATTCGGCCTGATAGGGTTTAATGGTCTTGGCTTGGTCAGCAATTTGAGGCTGGAATGAGAAGGGCCAAATTAGGCCCATTACATTTCAGAGACATTAAACATGTACTGATGTATACTACCTCAGTCCTAAAATATAGCAACTTTTAGTTATTAAGTGTGTCTAGATTCAGACTAAAAATGCTTATATTTTAGGATGGAAGGAGTATATATTTGACATGAACTAGCTAGATAAGTAGTACTCACTGAAATAAAATTAATTTCCTCTGCAACCAAAAGGTGGGCATGAACTAGCTATCGTCGGATGGATGGTTGAAACGTCAAGCTCACCAAAATCTTGAGAAGCTAGAGATGGTTAAGGACGTGAACAGTACGTACACAAACTTAATGAAACGCATTATTCTCCCACAACTTGTACAAAATTTAGTGTCGGCAACAACCTATCTTCTTCTTTTTGATAAAAAGGAGGCCAAGCCCAAGCAACAACCTATCAATCATTCAATCGATCTGTGACCAAGAAGAGAACAAGGAGCAACAGGTCTACCATGTCCAATTGTCCATAGGAATCAGCACGTGTGCTTACCTGCTAAAAAGAGTTGGAATTTTGCTACTGTTGAGTGAACTTAACTGTGAGATGTTTGTGTCCTTTGAACCGCATAGAGAAAACTGATGGCCATTCATGAGCATCGCGTTTTGTCTCATCCCCAATAATACCTCTCCTTGTCTTCTCCATTTTCCTGGTCCAATCTTCTCATTTAATTTTCTCTCCTCCAATTCTCAATCTGATCAATCCTCATTTAGTCCTTACCAGATAGACCAACTTGAGCTACCCATTAATGCTCTAGTAATCTTCTTTACCTTTTGTTTCTCTTACCATTTTGCTTATGGATTACTCGTTCCTACAAAGGTGAACTTGTTTAATCCTTCTAACCAACTGACACCAACCCGGTCGATTAATTCTGTCATCAAATGTACTTCTCCGCTTAATTATTGTGAAACTAAGGAAGCCATCGTTTGGCTTATTTTAAGCATAAGCGAAACGACATTTTTGCAAATAAAAAATAATTTATGAATAAAACATTTATATAGTGTTCTTAGCAATCTAAAAGCCAAAGCTGAAAAATAAACTCCAATGAAAAAACCTCAAAATTAACTTTGAATTTAAGGTTGAAAATTCAAATTTCTTCAATGGAAAAACCTCAAAATCAACTTTAAATTTAAAGTTGAAAATTTAAATTTTGGCTGATAAGTATAAGCATAAGCGAAAAGATGGGGCGTATACAAGATAATACTACATCTATCTCTTTATATATAACGTCATTGACTTTCAAAAATAATATGTTTGACCATTCATTTATTTATTTTTTTTTTGCAAATATAAAAAAATTAAGTCATAATTCATGTTTATAAAAACTTTAACGATAAATTAAGTCAGAACAAAATAAATAATAATTACATATAAGATGAATTGTAAAATATATCTAAAAAGTTAACGTATCGTATATTAAAAATGGAGGGAGTAATAATACCTTTTCTTTTGCTAAAATTGATCCACGTCTAGATTTTCGTTTTTGCGCAGAGCCACTTATCTAGACTTGAAATCTAGAAATAGCCGATTAAAAAACAAAAAAATGGCTGTCATATCCACCAATGGAATTGAGCTTGACTGCCTAGTCAACAAGGCAAGGCATCATCAACGTTGGAAAGTTTAGATTTTTTTTCCAACGGAACAAACAAAACCTTGAGATTTTTCTTCTTGTAGTATTGTTTCTCAACTTTGACTGGTGCCTGATACCCACGGCCACAGCGCACCAGTGCACAGGTTACTTACCCACTGTACTAACTAATGCCCACGCCTGGGCTACTAATCATCTTTTATTAAGTCCAAATCCATCTACAGTTGAGACTTGAGATGAGAGAGAGAGAGAGAGCTGTCTCTTTCCTTTGCATTCCCCACACAAAGAAGAACGAAGAAGAACAAGCAGCAGATCAATTGGTCCTCCTCTCCTCTCCAATACTAGTATACTACCACACTGGCTGGCTGGGTTGGCTGCTCCTCGTTTCTCCTACCTTTGGCCTGCCCATTAATGGCCCCTGGTATATTAACCTTCTCTTCTCTTCCTCCCTCCTAGACTCCTCCTGCTCTGCTTTGCTTCCCTTCCTTGTGCGCCCCGCCCCCACGAAAATCCACTTCTTTTCCTCACCTTGCCACTGTCGGTTCTTGCCTCTTTCTTTGAGGACTCGCCCGCCCAACAGAAGGAGGCAAAGGATGATCCAGTCTTGAATGACCAGTTCCGGAGGATCTGCGCAAGCAAGGTGCGATTCCCCCCCCCCCCCCCCCCCCTTCTTTCTCGCATCTGCTTTCATCCCCCCTGAACCTCAAATAACACTTCCTCTAGATCTTTCCATCAACTTAATTAATCCATGTATTGCCTATCTTTGCGGTTGCGAAATGCTTGCTGATTTCTGGCCTCAGTTGACAATCATTATTGATCCGTCAACTTAATCTAGATTAGTTTCTGTGGACTAATTGATCCCCCAAAATATTTGTTTTTATTTTGTTTTATTTTCTAGACCATACTATCGCTGTGGTGTTCCTCATGTGATCCACTCAAGAATTTATCTTGTTGCCTGTGTAGATAGCTGCGCCTAGCATGTAAGAAGCACGACCATTCCATTACCATGGAGTTCCTGTAATCCAATCATTCGAGCAAACTCCATGCATTGGATCAGTAACTCAACAATGGTGGTTACCATTTTGCCCAACTGCATCTAGTTCCTATATTTGACCAGTTGCCCAAGAAACAACATTTCCATGGAAGCTCCTAAGCTTCGTTTCGTCAGATGCCCAGGATGCCTCCAGCTTCTTGTGGAGTACCCAACCATTGCTGTCTACCAGTGTGGTGGCTGTGGTACTGTTCTTAGAGGTAACAATCATTTAGTCTTCCTTTCAGTTTCCTCGTTACATATATTTCTGTTTCTCATGTACAGTTTTGATGACTAGTGGTATCTACTGTGCAGCGAAAAATCGAGTCGCGCCAGCAACTAATACTAATGCAGAATCTGGTGAGCACAATGAATTTTCAAATATTTCAACAGGGGATTCTCAGAACAACAAATTGATCTGTACAGATGGGCAGAAAATTTCACCATCCTCCAATGCACAACCTGGTGTGGTGCAGGAGAAGATTACCTTTGCTAGCGAGGAAAAAACTGTGTCCACTAGCAATAGTATCGACTCCAATGAGCATGTTAACATCGAGTGTTCCTTATTTGATGGGGATGCCAGCAATCATGATGTGAGGACTGAAGGCATAAATGATGAAGATAAAGTCACTGTGTCTAATTCAACTCTTGATTTAGTGAGGAAAGTAGAGAATGTTGAAACCGATGGAAATGAAAAAGGTTCCTTTACGGATGATGGGAGCATCAGCAATGAAGTTGCTACCACCCAAAGCATGGTCCACATGGATGGAGCTGGTTTTGATAATAATTTTACAGAAGTACAGAGTGCAGCTGAGGGGAAGTGTACACTTAGCGATGCTAATCTGGACTCACAAGAGATAGTTGCGATTTGCCAACCTGATAACATTTCTGTTGGCACAAAAGAAAGGGTTCAGCTATATGAAGGTTTTCATGTTGAATCACATGAAGATCTGATTGAAGAATTGGTGAGATCTCTTTCACTCAGTGACGACGAAGAAGAGTTTGTCGATATAGCAGAAAACAGTGAACTTAATGATGCTTTACGTTCTCAAATGGGCAGCTGCAGATTTTCATTGGGGAGCAAAATGAATGATGGCCCTCGAACTGATCCTCATGGCCGGTTAATCGAAGAATTAGAGATGTCTTTCAGTGATGCTGAAGAACCACTAGACCAAAATATTATGGTCTCCCTCAATGACATAGAAAAGCCTATTTTAGATGAGGTCAGTAAAGAAAATCACATTTTGGAGGAGGATGGTAAAGAAAGTCACATTTTGGACGTGGATGGTAAAGAAAGTCACATTTTGGACGTGGATGGTAAACAAAACCACATTTTGGACGAGGATGGTAAAGAAAACCACATTTTGAATGAGGATGATAAGGAAAACCTCATTTTGGATAAGGGCGGCGAGGACACTTTGGATGCAGGTGGTGCTAATTCATATGAAGAAAGAGTATTGCCATCAGATGATGGGCTTCTCAAATCTGGACAAAGTTTCCAACAATGTGAGCTGGCTGCTGTTAACATGGCAGAAAAGGATGAGGGGCATCTAGAAGAAACCAACATGGCTAACCATGCTGAAGCAAACAGTGGAACTGCTGCTGTTCTTTCAAATTTGTCAAACGATAAATTTTGTGCCATATTACCACCTAGCTGTGATGGGAGAAAAGAAGAAAAATCTAACATACATAGAGGTAGAGAACTCTGTCAAGGATTGTCACTTGATTCTGTAGACTTCCGATCAATCCAAAATTTTATCGAGTCTCAAATGGATGGGACCTCAAGTTCTCTTTCAAGTGGCTCTCCAAGTCATGGTGACCTGGAACATAATAGATCAAACAGATTCAAGAAAATTGATCGACTTGAGCGCCTGAGGAAGATGGATGATCTAAGAGATCAGTTAAATAGGCTTTCTAGCCAGAAAGGTTTGGAAAATAGGTACAAGAACAAAGGCCCTGGACTCCTTCAGGAACAGATTAGCTACAGACACCTTGAACAACATCCTTGTGGTTTGGATGGTGATTCTATCCTGGATTCTGATATTATCGATTCCTATTATGATCAAGGAAATCCACCAAGGTACCCACCACCAGATCCGTTCTCCCCAACTCATTCGCACTATCATTGTGGACATGGGCAACCCCATATCCCATATAACTGCAGTGCATGGGAGTTTAATTCATATTATCAGTCCTCATATGCGGGAAGTACAGTTCTTGAACACGAGTCACTTCGCTCGAGCTACAAGGAGCAGAAACGTGCAGTGAGGAAAAGCATTCTGCGGTCTCTGTCTGGTGCTTCCCCATTTACCATCTGCAATGGCTGTTTCAATTTGGTTCAAGTGCCATCAGACATCTATGTATCGAAAAAGAAGATCGCTAAGTTCCAGTGCGGTCGGTGCTCCAAGGCCCTTATGTTATCATTTCCTGCTACAAATAGTGAAGATGCAAAGCTCAGTAATAAGGAAGTAAATCGAAAACCAAACAAGCCTGTCCACAATAGTGTTGTTGGTATGGAGGGTGGCTATTCTTTTTCTGCTGAATGCTCACGAGGGGATCCTGTGAGCATAAGTGAAGAATGTGGAGCTTCAATCTCAAGAAGCTTCTCTGGTAGAACTAGAGCAGCTGTTGCTGCATCAGGAAGTGGAAAAAAGGTGTCAGACTCGGCACTTCATCGGCTCATGGGGTATGATTCAGCAAGCCAGTTGTTACGGCGGAGCAGAGCATTTGACGATGGATATGACAGTTTTGAATCCATGGTGCCAGTATCAAACAGAGTATCCAGAAGAAAGAATTTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036754