Os09g0511900

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Revision as of 07:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0511900| Description = Glycoside hydrolase, family 1 protein| Version = NM_001070175.1 GI:115480092 GeneID:4347547| Length = 5751 bp| Defi...")
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Gene Name

Os09g0511900

Description

Glycoside hydrolase, family 1 protein

Version

NM_001070175.1 GI:115480092 GeneID:4347547

Length

5751 bp

Definition

Oryza sativa Japonica Group Os09g0511900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20562373..20568123

Sequence Coding Region

20562765..20562972,20564013..20564115,20564588..20564681,20564924..20564937,20565092..20565303
,20566176..20566291,20566393..20566648,20566983..20567070,20567152..20567223
,20567305..20567380,20567463..20567521,20567661..20567724,20567961..20568122

Expression

GEO Profiles:Os09g0511900

Genome Context

<gbrowseImage1> name=NC_008402:20562373..20568123 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:20562373..20568123 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cgagctagagccatggcgaccggagagctcgctctcgtgtcctcgctgttcatcgtcgtcgtgttcctcttgcttggtgcggtggcgagagaggcttctgcgctcacccggcatgacttccccgagggcttcgtcttcggcgcaggctcctccgctttccaggtggaaggggcagctgcagaggatgggaggaagcccagcatttgggacaccttcatcaatcaagggtacatgcctgacggctccaatgcagatgtctcagcagatcagtatcaccattacaaggaggatgtaaagcttatgtatgacatggggctggatgcgtacagattttccattgcttggcctcgtcttattccggatggaagaggagagatcaaccccaagggcttggagtactacaacaatctgatagacgaattgataatgcatggaatacaacctcatgtcaccatctaccattttgatctccctcaggcccttcaggatgagtatggtggaatactcagccccagattcatagaagattactcggcttatgccgaggtgtgcttcaagaacttcggtgacagggtgaagcactgggccacctttaaccagccgaacatcgagcccatcggcggcttcgacgccggcgaccggccgccgcggcggtgctcctaccccttcggcaccaactgcaccggcggcgactcctcgacggagccgtacatcgtggctcaccacctgctgctcgctcatgcctcggcagtgtccatctacagacagaaataccaggcaattcaaggaggccagatagggatcactctcatggttcggtggcatgagccatacaccgacaaaacagccgatgcagctgctgccattaggatgaatgaattccatattggatggtttttgcatcctttggtgcacggagactaccctccggtgatgaggagtcgcgtgggcgttcggttgccatccataacggcgtcagattcagagaaaatacgcggatcgttcgacttcatcggcatcaaccattactacgttatctttgtgcaatccatcgacgcgaatgagcagaaactacgggactactacatcgacgcaggtgttcaaggagaagacgacacggagaacattcagtgtcattcttggtctcttggcaaggtgctgaatcacctgaaactcgagtatggcaaccccccggtcatgatccacgaaaatggttattcagattcaccggatatcttcggaaagatcaactacaacgatgacttcagatcggcgttcttgcagggctacctggaagctctgtacttgtccgtacggaacggatcgaacacgcggggatacttcgtgtggtcgatgttcgacatgttcgagttcctctacggctaccgcttgcggtttggcctgtgcggcgtcgacttcaccgccgcggcgaggacgaggtacctcaagaactcggcgcgatggtactccggcttcctccgcggcggcgagctccggccggagaaatcctacgccacactgtga</cdnaseq>

Protein Sequence

<aaseq>RARAMATGELALVSSLFIVVVFLLLGAVAREASALTRHDFPEGF VFGAGSSAFQVEGAAAEDGRKPSIWDTFINQGYMPDGSNADVSADQYHHYKEDVKLMY DMGLDAYRFSIAWPRLIPDGRGEINPKGLEYYNNLIDELIMHGIQPHVTIYHFDLPQA LQDEYGGILSPRFIEDYSAYAEVCFKNFGDRVKHWATFNQPNIEPIGGFDAGDRPPRR CSYPFGTNCTGGDSSTEPYIVAHHLLLAHASAVSIYRQKYQAIQGGQIGITLMVRWHE PYTDKTADAAAAIRMNEFHIGWFLHPLVHGDYPPVMRSRVGVRLPSITASDSEKIRGS FDFIGINHYYVIFVQSIDANEQKLRDYYIDAGVQGEDDTENIQCHSWSLGKVLNHLKL EYGNPPVMIHENGYSDSPDIFGKINYNDDFRSAFLQGYLEALYLSVRNGSNTRGYFVW SMFDMFEFLYGYRLRFGLCGVDFTAAARTRYLKNSARWYSGFLRGGELRPEKSYATL</aaseq>

Gene Sequence

<dnaseqindica>5152..5359#4009..4111#3443..3536#3187..3200#2821..3032#1833..1948#1476..1731#1054..1141#901..972#744..819#603..661#400..463#2..163#gcgagctagagccatggcgaccggagagctcgctctcgtgtcctcgctgttcatcgtcgtcgtgttcctcttgcttggtgcggtggcgagagaggcttctgcgctcacccggcatgacttccccgagggcttcgtcttcggcgcaggctcctccgctttccaggtatatatacataaaatccatcgatcatgcatgtcagaagctcatcatgctcagatgctcatcctgctcacgctcaatgctcatgctctgctgaaatttggcggaatttgttgcatcggatttgtgtttccgtattgcatcatgtttgtatatgccaagatatgtgcttactaccgtgtgagcaatgctgttcaagaactgaatttgtttttgcaaatgtgtcacacctggagtaggtggaaggggcagctgcagaggatgggaggaagcccagcatttgggacaccttcatcaatcaaggtccaaaaaaatggagtagatgataatcttctcctcatgcttttattctagaacattttttttcttgtatgttctttatttacgcatgcatatagttgcattgttctagaatgaatatgtccatgattgatgcttacagggtacatgcctgacggctccaatgcagatgtctcagcagatcagtatcaccattacaaggtcagtgataagttcagatatgacacaaaatctataaaaaagatcagtttaatctacctttttttattttcaatgatttcaggaggatgtaaagcttatgtatgacatggggctggatgcgtacagattttccattgcttggcctcgtcttattccgggtagacataatcacataaataaggtagtactactgaatatcttctgaacacttatgacagtgagtttcaaattgtttttagatggaagaggagagatcaaccccaagggcttggagtactacaacaatctgatagacgaattgataatgcatggtacacattacttgctgcaccttggatttattcctagctgaatcttgatcggtagactcatcttctgtcatgtattggcaggaatacaacctcatgtcaccatctaccattttgatctccctcaggcccttcaggatgagtatggtggaatactcagccccagattcatgtaggcaccctgagaaactccacaaaatcctatgtaatctaaatgttttcatgacacaagctgatccaaatggtgatgaattcaggcaattccctaaaattttttttatatttttttagagatgggtattttttacccggtctctacatccaaccggatatatgcaacctttttaaattaggaacttagcctatcaagcagggaacttagccctcaaataactcaatctgaaattcgcttctatgaagatttgaactcaggaccatagggtgctactcaggtcactacaaccactagtcaattccctgacatgttgccacatattatatttcagagaagattactcggcttatgccgaggtgtgcttcaagaacttcggtgacagggtgaagcactgggccacctttaaccagccgaacatcgagcccatcggcggcttcgacgccggcgaccggccgccgcggcggtgctcctaccccttcggcaccaactgcaccggcggcgactcctcgacggagccgtacatcgtggctcaccacctgctgctcgctcatgcctcggcagtgtccatctacagacagaaataccaggtcacaatactgaattcatactgtgttcattggtatgtctttggtgtgtctttcacataccaagaaatggtccctgaacattgaattggacatgacagcaggcaattcaaggaggccagatagggatcactctcatggttcggtggcatgagccatacaccgacaaaacagccgatgcagctgctgccattaggatgaatgaattccatattggatggttagtactgctacttaaattgcagtaccaactagccatgccatactaactactccactgactaactactccactaactactactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtgtttgaccattcgtcttattcaaaaaatttaaataattatttattcttttcatatcatttgattcattgttaaatatactttaatgtacatatagttttacatatttcacaaaatttttaataagacaaacggtcaaatacgtactaaaaagtcaatggtgtcaaacattttaaaacggagggagtactccgtagtacttaaattctcggcattgctatctcaaatcccaagtacactcatgacaaacttaaaacgatgtttatacccggacttttcaagcataaaacaacaagtgtttgtgatatgaaactttattcggttcagcaatttgttagtcaagtactccctcattcctaaattgatcatcatatatgtttatgtaccaagaccaaagataatttaaatcacatcaatcaagatatcatgcacatattctcccacaatgcatgtatcgattaaaataccataccaattacaccttaatatgcagacattcttccatgttgtattaattatgttatgatgaaatctatgtctatgtggttatatgatattcaatttaagaaattttgaattccattatatgatgatcaatttggaaaggagggagtatttctgtatcttctgaccgtgtatatccacttgtgcgagcctgcgaggtcagatttctatcaattatcttagaaaacaaattgtcggtctcctgttttttcaatgtactgatctccgtctgaaaatgcaggtttttgcatcctttggtgcacggagactaccctccggtgatgaggagtcgcgtgggcgttcggttgccatccataacggcgtcagattcagagaaaatacgcggatcgttcgacttcatcggcatcaaccattactacgttatctttgtgcaatccatcgacgcgaatgagcagaaactacgggactactacatcgacgcaggtgttcaaggtaagaatctctgaacaccagatgttcccaagctaagtaatcagtcaaactttgcatgcattatccatggctttctacaatcaactctcaactgcattagttttttgagttccataaaccgatcagctgatcagttgctgttcatctggtgcaggagaagacgacacggtaatatatagataatcgagctgcagtggagcagagttgtttttgaaaatgtttcaaggcattagaaattcagtcttgatagtcctttcgagatggtgctctctactgacactattttactatcctcgctttggaagtgatctcaaccattgatttataagttttactactagtagttaattaatgtggtaacataaatagatatgagtaaaacacctcttctttcgatgctccctttgcaggagaacattcagtgtcattcttggtctcttggcaaggtgctgaatcacctgaaactcgagtatggcaaccccccggtcatgatccacgaaaatggtaggtccgaattctgcgtgggaaatgtttttaatcccttagggggatattccttcgtttcttatatgtcacctaaaaagttataaactttttttaaaaaatgataagatagattaatatgaaatataccatccacaaacgtgtaagttaaaaatttaacttctataagttggtaacagaaataatgaatataactgtgaatatatgactatttttagtttaatttattcttttttttctaacttgttgaaatcaaatttgatcttacatgcttgtaaatgatatatattaatctatgttgttaatttttcttaaaaaaagcaaattacaactatttaggtgacatgtaagaaacgaacaggtctcatctagagggatgaaaatccatcttccatagttcttggtagctttaaaatggcatttgtcactggcttagtacgatgtaaattatgttttttcctcgatgcctcaggttattcagattcaccggatatcttcggaaagatcaactacaacgatgacttcagatcggcgttcttgcagggctacctggaagctctgtacttgtccgtacggtgcgctcactctcctagctacttacttcctttgtgctcgtaaaggaagtcgttttggacagcgacatggtctctaaaacacaactttgacttcttatttctataaaaatatttattgaaaagtgatatatgtatacttttatgaaagtatttttaagataaatctatttatataatttttacatattcaaacttaacaagttgagagttattcatgatttatattcccagggtttgacttaaacattatcctaaacgacttcctttactagtatgaagggagtactcccaccatttcatattgtaagacattttagtttttttctaagacaaacttctttaaacataactaaaacagaaaaatatgccaatatttataacatcaaattaattttattaaaatccacattaaaatatgtcgtgatggtacatttatttggtattaaagatattaataacttcttttggtttttaacagatgataccgttaactcaaacattcatcttattgaaaatatatatttaattttttacttggttttatcattaatgataaaagcttagtcaaaattagacatatggttgaacatatgttaaaaaattcaatgtcatcatctattaaaaatctgagtgggcatttctttataaacttagtcaaaattagagaactttaacttagcacaaaactgaaacagctcattatatatagcggaagtactactcagttcggacttaagatagattgtgcttaatggatgcaaattgtgtgctgtactgcacctaaagtaggtgccactgacatgtgggtcacctactacatatgctgtacagtagaggatcccctcctgcttaattagtttccgtgtgtttagtttcacgttaaaattaaaagtttgactaaaattggaagtttgaagaaaaaaactagaagtttatgtatgaagttatgtatgaaggaaaattttgatgtgatggaaaagttgaaagtttaaagaaaaagttaggaattgaacaagggctttgttggtctgctggtgcaggaacggatcgaacacgcggggatacttcgtgtggtcgatgttcgacatgttcgagttcctctacggctaccgcttgcggtttggcctgtgcggcgtcgacttcaccgccgcggcgaggacgaggtacctcaagaactcggcgcgatggtactccggcttcctccgcggcggcgagctccggccggagaaatcctacgccacactgtgatcactccagagaaattcggaggcgtacagtacaggaagatggccaacgctggctaagttattactacctccgtattttaatgtataaagccgttgactttttatctaacgtttgaccattcgtcttattcaaaaaatttatgtaattattatttattttattatgactagattcatcatcaaatgttcttaaagcataacataaatattttcatatttacacaaaaaaaattttgaataaaatgaatggtcaatcgttgtttaaaaagtcaacggcgtcatacattaaaggcaaattttactacaggacactcgttatgtgtggttttaggcctaagacactgcccaaactcacttttgagggaaaacactccataaacatggtaatttgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0511900, RefSeq:Os09g0511900