Os06g0571400

From RiceWiki
Revision as of 09:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0571400| Description = Similar to Elongation factor 1 gamma-like protein (Fragment)| Version = NM_001064451.1 GI:115468633 GeneID:4341354| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0571400

Description

Similar to Elongation factor 1 gamma-like protein (Fragment)

Version

NM_001064451.1 GI:115468633 GeneID:4341354

Length

3658 bp

Definition

Oryza sativa Japonica Group Os06g0571400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:23012788..23016445

Sequence Coding Region

23012955..23013334,23014281..23014776,23014856..23014957,23015041..23015093,23015177..23015237
,23015314..23015463,23016121..23016129

Expression

GEO Profiles:Os06g0571400

Genome Context

<gbrowseImage1> name=NC_008399:23012788..23016445 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:23012788..23016445 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcttgtgttgcattgcggaagtggcaacaaaaatgcctttaaggcacttattgctgcagagtacactggagtcaaggtcgagctgaccaagaattttgagatgggtgtctcaaacaagacccctgagtttctcaagatgaacccccttgggaagattcctgttctggagactcctgaaggtgctgtttttgagagcaatgctatcgcgcgctatgttgctcgcttgaaggacaacagctctctttgtggttcttctcttatcgactattctcacattgaacaatggatggacttctcagcaacagaggttgatgccaatattggaaggtggttgtacccaaggcttggttttggcccttatgttcctgtgcttgaggaatttgctattacttcattgaagaggtcattgggtgctctgaacacacaccttgcttcaaacacataccttgttgggcattcagttactctagctgatattgtgatgacatgcaacctatattatgggtttgttcggatcttgatcaagagtttcacctccgagttccctcatgttgagcggtacttctggacaatggttaaccagcccaacttcaagaaggtcattggtgatttcaagcaagcagagtctgtgcctcccgttcagaaaaaggctgctccccctaaggaatcaaaagcaaaggaggccaagaaggaggctccgaaggaggcccctaaaccaaaggttgaggcttcagaggaagaggaggcaccaaagccaaagccaaagaatcctcttgatctactgccaccaagcaagatgattcttgatgagtggaagaggctatactcaaacacaaaaaccaacttccgtgaaattgccattaaaggtttctgggacatgtatgacccagagggttactctctgtggttctgtgactacaagtacaacgatgagaacaccgtatcgtttgtgacgatgaacaaggtcggtgggttcctgcagcggatggatctgtgccgcaagtatgcttttggcaagatgctggtcattggctccacaccgcccttcaaggtcaagggactctggctcttccgtggtcaggacatccccaagttcgtcatggatgaggtctacgacatggagctctatgagtggaccaaggttgacctctctgatgaggcccagaaagagcgtgtcaatgccatgattgaggaccaggagccgttcgagggcgaggacttgctggatgcaaaatgcttcaagtga</cdnaseq>

Protein Sequence

<aaseq>MALVLHCGSGNKNAFKALIAAEYTGVKVELTKNFEMGVSNKTPE FLKMNPLGKIPVLETPEGAVFESNAIARYVARLKDNSSLCGSSLIDYSHIEQWMDFSA TEVDANIGRWLYPRLGFGPYVPVLEEFAITSLKRSLGALNTHLASNTYLVGHSVTLAD IVMTCNLYYGFVRILIKSFTSEFPHVERYFWTMVNQPNFKKVIGDFKQAESVPPVQKK AAPPKESKAKEAKKEAPKEAPKPKVEASEEEEAPKPKPKNPLDLLPPSKMILDEWKRL YSNTKTNFREIAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTMNKVGGFLQRMDLC RKYAFGKMLVIGSTPPFKVKGLWLFRGQDIPKFVMDEVYDMELYEWTKVDLSDEAQKE RVNAMIEDQEPFEGEDLLDAKCFK</aaseq>

Gene Sequence

<dnaseqindica>3112..3491#1670..2165#1489..1590#1353..1405#1209..1269#983..1132#317..325#atcctcctcctcctcgcgccgccataaatcctcgtctcccgtaccaactaaacccccttctctctccgctggggttctcgccgccgccgccgccgccgacgatctcgtctcgcaccgcctctctctcggtgtaagagctcgccccgactcatctcgtcgtgggaagttcgcgtggttgcggcttctccgcccgcgcttggtctcgctgtgtttttttttttgttcggtggatttaattttgttttgctttttttttttctctggtgttgcagatctgagatttggatcgggcgcgaggccggcggctccagtcggcatggcgcttgtgagtgtcctctatccaatttcgttgtttccttgtagtttctgtatgtgcagtgcgcgtggctcagattgccttttaagtagatgatgtttgatgcgattgggtgttcatctgcctggattagaggggatgagtgctgcgttggtagattgatatgatgcgcaatgcgggttgtaggttcgtgcctgtgtagcgttcctagcgtggatgcagtttgcaagccacgggtgtataggattttcttttcgtgtgtgtgtgtgtggagggtttggttaaatgttgatgttgaagtgatagggatccgcttaggttggtttgtttctttggatgattaggtcatgtcattttagattaccttctggtatactcgataggatttgttgacttgttctgagctcgttcgaactccatggtatattagttagtatctagaaataatatgcttttgcatttcaaatgcttgattacgtcagtatctatcgacaaatagtagttttttttgcgcttcaaatgcttggtcttgagaaatgctgaatctggtttggtcatttaggttggtggagctctgtttgttgcatgtatactagttactctacaggtggaaatagataaattgccattttcatcactatatttccaatgtttttctttctataggtgttgcattgcggaagtggcaacaaaaatgcctttaaggcacttattgctgcagagtacactggagtcaaggtcgagctgaccaagaattttgagatgggtgtctcaaacaagacccctgagtttctcaagatgaacccccttgggaaggtatgcgaatgtaatttataattagatttgtccaataaagtgaatcagggagacagggactaatcattctttgcagattcctgttctggagactcctgaaggtgctgtttttgagagcaatgctatcgcgcgctatggtatgcatgtagacttgtattttcttattcaaatctaccttttccagttccatactaaccaggttaatcatgtcctacttaagttgctcgcttgaaggacaacagctctctttgtggttcttctcttatcgactatgtgagtgatgcatcaagtatttgtattatcatggcagagtgaattgtagccttgtagggctgatccgttgatgattcttgcagtctcacattgaacaatggatggacttctcagcaacagaggttgatgccaatattggaaggtggttgtacccaaggcttggttttggcccttatgttcctgtggtaagttgaataattggtgtatttccttctctctattgagcgttggcaatctacgataatctaaatattacatatgcagcttgaggaatttgctattacttcattgaagaggtcattgggtgctctgaacacacaccttgcttcaaacacataccttgttgggcattcagttactctagctgatattgtgatgacatgcaacctatattatgggtttgttcggatcttgatcaagagtttcacctccgagttccctcatgttgagcggtacttctggacaatggttaaccagcccaacttcaagaaggtcattggtgatttcaagcaagcagagtctgtgcctcccgttcagaaaaaggctgctccccctaaggaatcaaaagcaaaggaggccaagaaggaggctccgaaggaggcccctaaaccaaaggttgaggcttcagaggaagaggaggcaccaaagccaaagccaaagaatcctcttgatctactgccaccaagcaagatgattcttgatgagtggaagaggctatactcaaacacaaaaaccaacttccgtgaaattgccattaaaggtattatttctattttgtttcagaattgctctatttgatatattaagtatctcctagcaagttgtgtggggggcttgttatcattggctgattttgtctagaagtgtgaatatatttttctgatctgtcattatccatgggcatatcagactatcagaggctattcagtcctgactgattgctctccttggtaaattagactttgacctagaccattcacgtttaaaatttaatggtcttcaattacttttttttttatatcaacctcattaagttttgccattctagatttgcctaagtcaaacatttgtatcaaactttcataatatatatatatattcaaatgttaaactatgcgagtttctagaatttgatggttaaagataaaaatgtttgacttaggacaaagctagattgagatataatttgaaatggatgaaagtgcaactattactcaaatagaaaagaataatactgagtcaactactggtagctgcaaaatattttgcccaactcagctgatttgcaaacatagacagagatctgccacctcttgcactagctgttgtgctttttgatgtactttccagactctagctcactcgtgacagcttctcattggcatgcagtcatagccttactttcctgcggggcaagccacctcctatgtaatgacttgcttttctcgggaaaatccaaaattgttctttaccttttttgaggcatttatttaaccaatgtatagtaaaaatggctttggatcttaaacgtgggtcggacaattatttcttattgtgaagccagcttatattagtatacatgtgtattactatttcattacagcagcttcttgttacaattttagcaatatatttaggcatgaacttaatttattccattttcttgtttttgaattaacagagacattatcacgtctatttttcaggtttctgggacatgtatgacccagagggttactctctgtggttctgtgactacaagtacaacgatgagaacaccgtatcgtttgtgacgatgaacaaggtcggtgggttcctgcagcggatggatctgtgccgcaagtatgcttttggcaagatgctggtcattggctccacaccgcccttcaaggtcaagggactctggctcttccgtggtcaggacatccccaagttcgtcatggatgaggtctacgacatggagctctatgagtggaccaaggttgacctctctgatgaggcccagaaagagcgtgtcaatgccatgattgaggaccaggagccgttcgagggcgaggacttgctggatgcaaaatgcttcaagtgagcagcacaatgtttagaagcaaaatcatcagttgcaaaagtactatttaggacttgaattcggagttaaaacagttgcctttttggtggagttttgttacttgctgtttatttgacctggtataccttttgaactggttgatttttgtgcaatgtctcagattttgg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0571400, RefSeq:Os06g0571400