Os09g0512000

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Revision as of 07:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0512000| Description = SecY protein family protein| Version = NM_001070176.1 GI:115480094 GeneID:4347548| Length = 2825 bp| Definition = O...")
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Gene Name

Os09g0512000

Description

SecY protein family protein

Version

NM_001070176.1 GI:115480094 GeneID:4347548

Length

2825 bp

Definition

Oryza sativa Japonica Group Os09g0512000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20571127..20573951

Sequence Coding Region

20571754..20572094,20572291..20572500,20572580..20572931,20573028..20573152,20573286..20573424
,20573525..20573758

Expression

GEO Profiles:Os09g0512000

Genome Context

<gbrowseImage1> name=NC_008402:20571127..20573951 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:20571127..20573951 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcaaataggtcaaagttctggagattagcagcgctagtccctgaagtgcagtgtcctgaccagcccatctctccccgtcaaaaatttaaatacacggccattgtacttttcatctttgtgactgccagccaagttctattgtatgggatccaacaccaacctcgaaccattgagcctgatccattacattggctgcatctgattctggcgtcaagccgtagtactctcttgtcgcacgggatcgtcgctattctagtacctgaggttctggtgaagatctgggtgtacctaaagatcataactctcgataccagtgcacctgaaactggtgttcttatgaatagagcacaaaggttgctggggatattggttgccattctgggagctgttaatttctatgtgcgaagccaacatttcactgtcaatacggttctaataatgcttcagattctttgctctgatatcattgtcatttatcttgatgatgtcctaagaaaaggatatggattgttatctggtatatccttgttcactgccaccaacatctgtgtaaatattctgtggaaggccttcagccccatgtccgtcatgtatcctgaacaaagccctgaatttgagggagctgttattgcctgggttcatcttctgatgactagaacggataaattgtctgcaatgtctaaagccttttaccgtcaaaacctcccgaatattatcaattttctagccacttgcttgtttgttccacttgccatattcttccaaggcttctatattgtactgcctgtcaggacacggcgtaattttcaagcctactgccacatcaagctctcacatttcttgtatgggcctgttgtcttgcaccgtttactgctcccacttccttatgttgcctcaaaggtgctgtacaagaaatacagtggaaacacactagtgaatttgcttggcaagtgggatggattgaaccattttggacagtctatccctgttggagggatagtgtactacctaagaacgccccctatcttggctgatttgcacagggacccgttccatgcatttatatatgtcgcattcgtgcttatttcatgtgtgtttatctcaatgggtcttatggtctgtgcatcttcaaaaggagttttcaacgggtttgttgtgttaaatatgcaggaggaacgaagactgaggcttgcccagcccgactcaatacatgcgaacgaaattcggcgtcatgtcatgagggcagcttgtgttggtggtttctgtgccggtgtactaataattttcgcagatctcattggggtgttttgttctgggactggaattatgcttgctgtgactgcttcatatccttatgttgatggcagagctagtgaggtcgggtcctttggcttctga</cdnaseq>

Protein Sequence

<aaseq>MSNRSKFWRLAALVPEVQCPDQPISPRQKFKYTAIVLFIFVTAS QVLLYGIQHQPRTIEPDPLHWLHLILASSRSTLLSHGIVAILVPEVLVKIWVYLKIIT LDTSAPETGVLMNRAQRLLGILVAILGAVNFYVRSQHFTVNTVLIMLQILCSDIIVIY LDDVLRKGYGLLSGISLFTATNICVNILWKAFSPMSVMYPEQSPEFEGAVIAWVHLLM TRTDKLSAMSKAFYRQNLPNIINFLATCLFVPLAIFFQGFYIVLPVRTRRNFQAYCHI KLSHFLYGPVVLHRLLLPLPYVASKVLYKKYSGNTLVNLLGKWDGLNHFGQSIPVGGI VYYLRTPPILADLHRDPFHAFIYVAFVLISCVFISMGLMVCASSKGVFNGFVVLNMQE ERRLRLAQPDSIHANEIRRHVMRAACVGGFCAGVLIIFADLIGVFCSGTGIMLAVTAS YPYVDGRASEVGSFGF</aaseq>

Gene Sequence

<dnaseqindica>628..968#1165..1374#1454..1805#1902..2026#2160..2298#2399..2632#aacggcctgaatttcgccgtccccttggcggcgcctcctctccttgcgagttcgcccaccgcctgcctgcgccgatcgatctccataggcgccgtcttcctgcggcttccgcccgggtgagcatcctgtccagttacgcaaacccaccccacttttgtctcggatttttgcttgcgttaaccctagcttctcttgatctagacctgtggaagaagctcttattaatattaacaagtacttcctccgtttcacaatgtaagactttctagcattgctcatatttatttagatgttaatgaatctagacatatacgtgtttagattcattaacatctatatgtatgtgggatgctagaaagtcttacattgtacagtttgtccgttccccccaaaagtttaggggagttattagccatgagtttgttcttgcatttactactacacttgattgaacttcgtaccagcgactgtcatcttccgagaagtactgtaaaaagaaaggagatattagcctgcttaatattaattgaagtgtttaattgcattttctttaatttgcagttgtgtaattgtattttctttctgatttgttttgccaggttctaccttggttaactatcaggaaagatgtcaaataggtcaaagttctggagattagcagcgctagtccctgaagtgcagtgtcctgaccagcccatctctccccgtcaaaaatttaaatacacggccattgtacttttcatctttgtgactgccagccaagttctattgtatgggatccaacaccaacctcgaaccattgagcctgatccattacattggctgcatctgattctggcgtcaagccgtagtactctcttgtcgcacgggatcgtcgctattctagtacctgaggttctggtgaagatctgggtgtacctaaagatcataactctcgataccagtgcacctgaaactggtgttcttatgtaagtgctgattctgctcacctccaattaatctaacggcaatatttgcatatggagagatggaatggtgacagtcgatctgctatgctttgatcggtttcataaagaaatgaatattcttttgggtggtgaaattttgtaaacaacaaattgcaatttttgtttgctaattggggcctttatttatgaaattcaggaatagagcacaaaggttgctggggatattggttgccattctgggagctgttaatttctatgtgcgaagccaacatttcactgtcaatacggttctaataatgcttcagattctttgctctgatatcattgtcatttatcttgatgatgtcctaagaaaaggatatggattgttatctggtatatccttgttcactgccaccaacatctggtaagggcttgaaattaaaagcatcatggttgaattggtttaagactgtaagctaacacctgtcccattttctgtatagtgtaaatattctgtggaaggccttcagccccatgtccgtcatgtatcctgaacaaagccctgaatttgagggagctgttattgcctgggttcatcttctgatgactagaacggataaattgtctgcaatgtctaaagccttttaccgtcaaaacctcccgaatattatcaattttctagccacttgcttgtttgttccacttgccatattcttccaaggcttctatattgtactgcctgtcaggacacggcgtaattttcaagcctactgccacatcaagctctcacatttcttgtatgggcctgttgtcttgcaccgtttactgctcccacttccttatgttgcctcaaaggtgcttgcctacactattacactttataatgtgatactactaacactgctgaggcttcctatgtaaaacatgctaactctgttttttgggttgcaggtgctgtacaagaaatacagtggaaacacactagtgaatttgcttggcaagtgggatggattgaaccattttggacagtctatccctgttggagggatagtgtactacctaagaacgccccctatgtgagtgcacatacttgtggaaattatattgcccacatttctgatttcaatttaaaagtatgacttgatacctaagtcctaagtgttgcctttttttttgctttgccttatgtttcccttttctctcctgcagcttggctgatttgcacagggacccgttccatgcatttatatatgtcgcattcgtgcttatttcatgtgtgtttatctcaatgggtcttatggtctgtgcatcttcaaaaggagttttcaacgggtttgttgtgttaaatgtatgtatgaaaagaaactctgcgcagcattgttgttttaccctcttcccctgttacatattagcaagttaatccgtttactttgattgattcaatgcagatgcaggaggaacgaagactgaggcttgcccagcccgactcaatacatgcgaacgaaattcggcgtcatgtcatgagggcagcttgtgttggtggtttctgtgccggtgtactaataattttcgcagatctcattggggtgttttgttctgggactggaattatgcttgctgtgactgcttcatatccttatgttgatggcagagctagtgaggtcgggtcctttggcttctgactgatcgagatatctactcctaaataaagatgagatacagaaagcggctacttgtaacgagagttaaatccatggatatttatttattatgtagtctgcaagaagctaatttttttttctttttacaatgtatatatttgttatttgctgaaaaccggtgtttcagtgaaacacactaatctgttttggtcgc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0512000, RefSeq:Os09g0512000