Os06g0578100
| Gene Name |
Os06g0578100 |
|---|---|
| Description |
ab initio prediction with EST support |
| Version |
NM_001064465.2 GI:297606053 GeneID:4341370 |
| Length |
4438 bp |
| Definition |
Oryza sativa Japonica Group Os06g0578100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 6:23364701..23369138 |
| Sequence Coding Region |
23364701..23364718,23365896..23367227,23368178..23368627,23369070..23369138 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008399:23364701..23369138 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008399:23364701..23369138 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggggcaactccataatttgatgcttctgctgccgtgcctgatcttctccacgctactgcacatagaggcgatgagtgtagctcctgtgaaagtgagcaccacgcccatcttccccacaatcccaagagctcagacgaacaaggacttccaggtgttactgcgtgttgaggcgccaccggcggccgatctcaacggccatgtccccatagacgtcgtcgcagtgctcgatgtcagcggcagcatgaatgatccggtggcggcgtcgccggagagcaatctgcaggcgacgaggttggatgtgctcaaggcgtctatgaagtttatcatcaggaagcttgacgacggagaccgcctctccattgtggcttttaacgatggacccgtcaaggaatatagctccggcttgttggatgtttctggcgatggccggagcatcgccggaaaaaagatcgaccgacttcaggcccgtggtggcagtggctctgcgcttatgcccgagttgcaggaggccgtcaagatcctggatgagcggcaaggcaacagccggaaccgcgtagggttcatcctcctcctgaccgacggcgacgacacgaccggattccggtggagccgcgacgtcatccatggcgccgtcggcaagtaccccgtccacaccttcgccctgggcgcggcgcacgacccggaggcgctgctccacatcgcgcaagaatcgcgcggcacctactccttcgtcgacgacggcaacctggacaagatcgccggcgccctcgccgtgtgcctcggcgggctcaagaccgtcgccgccgtcgacacgcgcgtcagcctcaagactgccgagctaggcggcgcgcggatagtgcgcgtcgactctggcggctacgagagcagcgttgcttgcggcggggcctccggtgaggtcgtcgtcggtgttctctacgccggcgaggtgaagagcttcgtcgtccacctccatgtgcctgctgcttcgtcgacgacgaccttctcgtcggtggagtgcggttactgcgacgccgccgccacggtctgcgaccatcaccaccaccaccattgccatcaccgtcatcaccagcagcagctgctcgccatcggctactcgtacagccacgctccgggcggcgaagcggtgtccatcgaagggcacggcgtgttcgtcgagaggcccgaggtggccgtcttctccgtcgacggcggccgacaacggcaaaccctcctcccatcccccgtcgtgatgcagcacatggtccggttcgagctgctggagctcgtcgccggcttcgcggaaaccgagatgctgtcgaagaaggggacgatgcagctgcgcggcggcggcgcgcgcgccggcgacgtgctgcagggcaagtgggaggagttccggcgagcccggcagttctggggcggggtcgagctggacggcctcgaggaggatgtggacgccatggtggccagcctcaggagcgggctagcctacgtcagctcgtgggtgtcgagccaccagatgcagcgcgccaccgccatgggctcgccggagaaggtgatcgccgagttcatgacgccggcgatggtgatcatgctggaggaggcacgtaagctaccgtcgccgctgccagctgcggctgaggcggcgagagagaggcggcccggctgcaagggcggcggcgatctccattacgtgatccggcagcggctggagctgtggtcgaaggtgagacgcgaggtgccgctcatgtaccagccgtcgtcggagcaggaagacgtccagctgaccgccttgtttcgggaggcgtcgctggaggccatcgaccgagcaatgcaccacgacatctatctgattcatgctgagaagtaa</cdnaseq> |
| Protein Sequence |
<aaseq>MGQLHNLMLLLPCLIFSTLLHIEAMSVAPVKVSTTPIFPTIPRA QTNKDFQVLLRVEAPPAADLNGHVPIDVVAVLDVSGSMNDPVAASPESNLQATRLDVL KASMKFIIRKLDDGDRLSIVAFNDGPVKEYSSGLLDVSGDGRSIAGKKIDRLQARGGS GSALMPELQEAVKILDERQGNSRNRVGFILLLTDGDDTTGFRWSRDVIHGAVGKYPVH TFALGAAHDPEALLHIAQESRGTYSFVDDGNLDKIAGALAVCLGGLKTVAAVDTRVSL KTAELGGARIVRVDSGGYESSVACGGASGEVVVGVLYAGEVKSFVVHLHVPAASSTTT FSSVECGYCDAAATVCDHHHHHHCHHRHHQQQLLAIGYSYSHAPGGEAVSIEGHGVFV ERPEVAVFSVDGGRQRQTLLPSPVVMQHMVRFELLELVAGFAETEMLSKKGTMQLRGG GARAGDVLQGKWEEFRRARQFWGGVELDGLEEDVDAMVASLRSGLAYVSSWVSSHQMQ RATAMGSPEKVIAEFMTPAMVIMLEEARKLPSPLPAAAEAARERRPGCKGGGDLHYVI RQRLELWSKVRREVPLMYQPSSEQEDVQLTALFREASLEAIDRAMHHDIYLIHAEK</aaseq> |
| Gene Sequence |
<dnaseqindica>4421..4438#1912..3243#512..961#1..69#atggggcaactccataatttgatgcttctgctgccgtgcctgatcttctccacgctactgcacatagaggtttaactgctaactcctctgttttaagtctgtttcttaatttaactagtgctatatatacatatataccccgttttttttctggatggtgagggaggagcaggaaggattcacttttacagtagtaagagaactattttgtcaatttgtacaatgatttaaatcacttaaccgatacaatggtgggagtaagagaaatgacctttggaaaaacagacgattaattgtatatttatgaaaaaccagccagagtactataccactcacctctcttatacttttttttggaaatgaagtaaccccaaaatgataaccatgtcttagccagtttgagaagaaccgtttgcaaagaacaatttaacaccatgaataatttcaccagcaatataataattttaaccaacaatatttcacacgtatgcatctgaaactctgaatgcaggcgatgagtgtagctcctgtgaaagtgagcaccacgcccatcttccccacaatcccaagagctcagacgaacaaggacttccaggtgttactgcgtgttgaggcgccaccggcggccgatctcaacggccatgtccccatagacgtcgtcgcagtgctcgatgtcagcggcagcatgaatgatccggtggcggcgtcgccggagagcaatctgcaggcgacgaggttggatgtgctcaaggcgtctatgaagtttatcatcaggaagcttgacgacggagaccgcctctccattgtggcttttaacgatggacccgtcaaggaatatagctccggcttgttggatgtttctggcgatggccggagcatcgccggaaaaaagatcgaccgacttcaggcccgtggtggcagtggctctgcgcttatgcccgagttgcaggaggccgtcaaggtatttgcaataatgtagtacaattatttatttgcaagtttggcaaaatgttaccttctccagctattaaaacacatgttgtttgcacatatttcaagtcaaacttccaaaatttgaaaatcgataccttcttaatattttggttggaggcattataactgctactacctccatcccaaaacaagtgcagccgtgaaaatccgtgtccaacgtatgaccgtgcatcttatttaaaaaaattatgaaatttttttaataaaatagtcacacataaagtgctattcatgttttatcatctaataacaataaaaatagtaatcataaaaaattttcaaataaaacgaatggttaaacattagagatgaatagtgcaaaactgcacttattttgggacggagggagtagtatattgtgtagacttgtctataaaattgtcagcataatagtttttttttcaaatattatataatacgcttgattatattatgtgatagagggagtagtaatcattttttaggaacaccaaatagatccacgcgtaattgtattattagagcaattctacggtccttgaggaggtaccatgaggtaccaaaattttagtgtaaaatttgatacctcatggtacctcatagtatctaggtattaagaggtaccaaatttacaatagaaaaaatattacctcctcaaaaaccgtaaaattgctcgtattattatagttgaaaccagtggttacgttatatcttgataaacatgttaatatcaaagacaagatattgttttgaacataagaagtacctaaaatttctttcttttaaggcttaaaaatatgctacattaatggagttatgattatattgtattttccctttaaatcaaaaattaaggatttaccctccaacagaccaatgacatgtaaaagttaagatcatctcacgacgtaatcacagatcctggatgagcggcaaggcaacagccggaaccgcgtagggttcatcctcctcctgaccgacggcgacgacacgaccggattccggtggagccgcgacgtcatccatggcgccgtcggcaagtaccccgtccacaccttcgccctgggcgcggcgcacgacccggaggcgctgctccacatcgcgcaagaatcgcgcggcacctactccttcgtcgacgacggcaacctggacaagatcgccggcgccctcgccgtgtgcctcggcgggctcaagaccgtcgccgccgtcgacacgcgcgtcagcctcaagactgccgagctaggcggcgcgcggatagtgcgcgtcgactctggcggctacgagagcagcgttgcttgcggcggggcctccggtgaggtcgtcgtcggtgttctctacgccggcgaggtgaagagcttcgtcgtccacctccatgtgcctgctgcttcgtcgacgacgaccttctcgtcggtggagtgcggttactgcgacgccgccgccacggtctgcgaccatcaccaccaccaccattgccatcaccgtcatcaccagcagcagctgctcgccatcggctactcgtacagccacgctccgggcggcgaagcggtgtccatcgaagggcacggcgtgttcgtcgagaggcccgaggtggccgtcttctccgtcgacggcggccgacaacggcaaaccctcctcccatcccccgtcgtgatgcagcacatggtccggttcgagctgctggagctcgtcgccggcttcgcggaaaccgagatgctgtcgaagaaggggacgatgcagctgcgcggcggcggcgcgcgcgccggcgacgtgctgcagggcaagtgggaggagttccggcgagcccggcagttctggggcggggtcgagctggacggcctcgaggaggatgtggacgccatggtggccagcctcaggagcgggctagcctacgtcagctcgtgggtgtcgagccaccagatgcagcgcgccaccgccatgggctcgccggagaaggtgatcgccgagttcatgacgccggcgatggtgatcatgctggaggaggcacgtaagctaccgtcgccgctgccagctgcggctgaggcggcgagagagaggcggcccggctgcaagggcggcggcgatctccattacgtgatccggcagcggctggagctgtggtcgaaggtgagacgcgaggtgccgctcatgtaccagccgtcgtcggagcaggaagacgtccagctgaccgccttgtttcgggaggcgtcgctggaggccatcgaccgagcaatgcaccacgacatctatctggtacctacttttacaccttattatccttttcgtcgtaataataccacgaatttagacagaagtttatctactactccctccgttttaaaatgtttgacaccgttgacttttaagtacatgtttgaccgttcgttttattcaataaaatttatgaaatatgtaaaactatatgtgtacataaaaatatatttaacaatgaatcaaatgatatgaaaagaataaataaatacttaaattttttgaataagacgaatggtcaaacacgtactaaaaagtcaacggtgtcaaatattttaaaacggatggagtatttctatttcctcttttggacttttcaaaattaatcaggtataagtttgacaacttaattttatttcatacaaatacaaaagtagtttgtatgtatataagtgtaatattatgaaactttatgtgttataacaaatttggaaatgtcaatttttatgcctaaaagttatgtcctataggaatcttttgagctaaccttactatttactataaacatcttagaaattttgtattttttgacggagggatcagagtagtaagcaaaagcaagaataattatcacatcgatctgatggatgcaggccgtggtgcacgtgaccaaccagaggcgatgctagattgctggccacggcgattaagtagtggaggccgatgaagcagcttcaagcataatgctttttagctataattaatcttataagtattttgctatatgcatctctattgccttgatttgcatgcattaaacaagtgtatgagctttgcctatgttgctagctcgtagatatcaatcgatctgtgtgtatgtaccacgagattactggagctagttagccagtaataatatatatggcagtcgtgtgtaataatatgggctgttcttgtacccaagcaccagttgttggccgcaagagcaagctggatctgctcatttcccattgtatccattttcattctcaataaatattatctcgtgatcgattatcctgccagcacctgcttgtccattgtaatttttcctgggatttaaattgttaatcattttagctttgttctaattaagtcaatcattcctaatttaattttactatcactctctaaaaaattataaagtttaatatcataagattatctcttatgtttttagattcatgctgagaagtaa</dnaseqindica> |
| External Link(s) |
