BGIOSGA037053

From RiceWiki
Revision as of 18:32, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA037053

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037053, complete gene.

LocusTag

OS12G0166000

Ensembl Transcript ID

BGIOSGA037053-TA

Ensembl Protein ID

BGIOSGA037053-PA

Length

5817

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3662055..3667871

Sequence Coding Region

3662055..3662073,3662452..3662859,3663856..3664326,3664587..3664802,3665082..3665632
,3665796..3665859,3665959..3666019,3666315..3666453,3666605..3666721
,3666837..3667014,3667261..3667871

Genome Context

<gbrowseImage1> name=IndicaChromosome12:3662055..3667871 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:3662055..3667871 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTTCGGCTCCAGCAACCCATTTGGGCAGTCGTCCACTAGCCCTTTCGGCCAGACCTCAAGCAACCCTTTTGGGGCCCAGACAGGATTTGGCCAGGCCAGCACCTCCACCTCCAATCCGTTCGCGCCGAAACCATTTGGCAGCCCGACCACCACGTTTGGGGCACAGACAGGAGGCTCACCTTTTGGCACGACGTCCACGGGGGCCTTTAGCCAGCCGTCCACTCCAGCGTTTGGCTCCACGTCCACAGGTGCCTTTGGCCAGCCATCCACCCCGGCGTTTGGCGCGACGTCCGCTGGGGCCTTCGGCCAGCCATCCACTCCGGCGTTTGGCACTCCATCATCCTCTCCATTTGGGAGCTCTGCGCCAGCTTTTGGTGCATCACCAGCCCCTGCATTTGGCGCCACATCGTCCACCTTTGGCAGCGGATCATCATTGTTTGGACAAAAGCCAAGCTTTGGTGGTTTTGGTTCCTCTCCTAGCCAATCCAATGCTTTTGGAGGCACATTCCAGCAAACACAACCAGCATTTGGTAGCAGCACTTTTGGTGCATCAAGCACGCCGGCCTTTGGTGCCACAACTACACCAGCATTTGGTGCCACAACTACACCAGCATTTGGCACCACCACCCCAGCATTTGGTTCAACATCGCCATCATTATTCGGTGCTACCAGTGCCCCAGCATTTGGTTCTAGTGGCTTTGGATCTTCAGGTACCCCAGCCTTCGGTGCAAGTAGCACTCCAGGATTTGGAGCTTCAAGCTCAGCTTCATTTGGCACATCAACGAGTGCTTTTAGCTTTGGCTCTTCACCATCTTTTGGTCAAACAGCATCTACATTTGGTAGCACTCCTTTTGGAACATCTACATCTCCTTTTGGTGCACAGACTTCTCCATTTGGCTCACAGACAGCAGCACCGACATTTGGGCAAACATCATTTGGGAACCAAGCAGGAGGAACCAGAATTCAACCCTATACTCAAACTCCAGACGCGGATAGTGCTACAAGTGGTGCTCAGCCCACTGCAAAGTTGGATTCTATATCAGCCATGGAGGCATACAAAGCGAAGAGTCATGAAGAGTTGAGGTGGGAGGATTACCAACGTGGAGACAAAGGTGGACCTAATCCTTCAGGAACTCCAGCAGCAACCCCTAGCTTCCCATCCCCACTGAACAATCAATTTCCCCAGAACCCTTCAAATGCATTCCAAACTTCAAATGCATTCCAAACGACATCCGTTAGCAATCCATTTGCTGCCAAGCCTTCCACTGGTTTCGGTTCTACTTCCACAACATTGTTCAATTCACCATTCAATAATACATCAGCAGCAAGCTCAAGTCCATTTGCATCAACTACAAGTAGCCCATTATTTACACAAACAAGCAGTTCTCTGTTTGCAAATTCTACTCCTGGTTTTGCTTCTTCTTCTCCGTTTGGCGCATCATTATCAAACCCCAGTTCATTCAGTACTGGCTTGTCCTTGGTTAACACTCAATCAGCTGGGCTATTTAGTTCTTCCCCGGCGTTTGCGCAACAGCCATTTACCCAGGCATCATCAGGGTTCGGATTGAGCACTCCAGCTTTCTCTACTGGAAGCCTATTCAGCACACCTACCCCTGGAATGACTGGTGGACTGTTTGGCAGCATGTCTTCACCCTTTTCATCAACGGCGTTTCAACAATCTGCCCCTACTCCAAGCATGTTCTCCTTCCAACCTCAAACTCAAACAGCTCCTACTGGTGGATTTCCTGGCATTTCCAACACTATGAATCAGGCACCTTTTGGACAGCCAACTCCTAGCCAGTCCAATATGGTCATGCAACCAGCTCTTGTTACAAATCCCTTCGGTACTCTGCCAGCAATGCCTCAGATGTCCATTGGGAATGGTGGATCAGCCCCTTCTGTTCAATATGGAATCTCAAGTTTGCCAGTTGCTGATAAGCCTCTTACGAACAGAACATCATTATCCATGGTGGTTCCTAGGCATTTGTCGCAGAGAAGGATAAAAGTGCTGCCCAGAAAATATAATCCGATATCTGATGGCAAGGTCCCATTCTTTGCTGATGACGAAGAATCTCCTGCAACACCAAAAGCTGATGCGTTTTTCATTCCTAGAGAGAACCCGAGGAATCTTATAATCCGTCCAATTGATCAGTGGCCTTCACGTGGCACTGTTGACAGGCAGCCAATTCCAAAGAATTTAGTTGATACAGATAAACATAAAGGCCCTCTGGCTATTTCACCAACCAGGTCTACTTCAATCGAAAATGGCATCCAGCGTGATGACCGTGCATCAAATGAGCCTGATACTGTGACAAGGCATGGGAATGGTACTTCTGTTGAGAGGCTTGTGCCTAAGCTAGTGCATGCCGATTATTATACAGAGCCTAGTCTGGAGGAGCTTGCTGCCAAAGAACGTGCTGAACCAGGCTACTGCAGTCGTGTGAGGGATTTTGCTGTGGGACGTCATGATTACGGTAGCATCAAGTTTATTGGAGAAACGGACGTGAGGGGCCTTGATCTGGAGTCCATTGTGGAATTCAATAACCGTGAAGTGATCGTCTACAAGGACGATAGCAAGAAGCCCCCTGTCGGTGAGGGTCTGAATAAAGCTGCCGTGGTGACCCTTCTCAATATCAAGTGCATGAACAAGAAGACGGGGGATCAGTACACAGAGGGTCCGAGGGTGGACAAGTACAAGGAGATGCTGGTGAAGAAAGCTGAGGAGCAGGGTGCTGAGTTCATCTCTTTCGATGCCGTCAATGGCGAGTGGAAATTCAGGGTCAAGCATTTCAGCTCCTATGGCTTTGGTGAAGCTGAAATCGTCTCTTGCTAG</cdnaseq>

Protein Sequence

<aaseq>MFGSSNPFGQSSTSPFGQTSSNPFGAQTGFGQASTSTSNPFAPKPFGSPTTTFGAQTGGSPFGTTSTGAFSQPSTPAFGSTSTGAFGQPSTPAFGATSAGAFGQPSTPAFGTPSSSPFGSSAPAFGASPAPAFGATSSTFGSGSSLFGQKPSFGGFGSSPSQSNAFGGTFQQTQPAFGSSTFGASSTPAFGATTTPAFGATTTPAFGTTTPAFGSTSPSLFGATSAPAFGSSGFGSSGTPAFGASSTPGFGASSSASFGTSTSAFSFGSSPSFGQTASTFGSTPFGTSTSPFGAQTSPFGSQTAAPTFGQTSFGNQAGGTRIQPYTQTPDADSATSGAQPTAKLDSISAMEAYKAKSHEELRWEDYQRGDKGGPNPSGTPAATPSFPSPLNNQFPQNPSNAFQTSNAFQTTSVSNPFAAKPSTGFGSTSTTLFNSPFNNTSAASSSPFASTTSSPLFTQTSSSLFANSTPGFASSSPFGASLSNPSSFSTGLSLVNTQSAGLFSSSPAFAQQPFTQASSGFGLSTPAFSTGSLFSTPTPGMTGGLFGSMSSPFSSTAFQQSAPTPSMFSFQPQTQTAPTGGFPGISNTMNQAPFGQPTPSQSNMVMQPALVTNPFGTLPAMPQMSIGNGGSAPSVQYGISSLPVADKPLTNRTSLSMVVPRHLSQRRIKVLPRKYNPISDGKVPFFADDEESPATPKADAFFIPRENPRNLIIRPIDQWPSRGTVDRQPIPKNLVDTDKHKGPLAISPTRSTSIENGIQRDDRASNEPDTVTRHGNGTSVERLVPKLVHADYYTEPSLEELAAKERAEPGYCSRVRDFAVGRHDYGSIKFIGETDVRGLDLESIVEFNNREVIVYKDDSKKPPVGEGLNKAAVVTLLNIKCMNKKTGDQYTEGPRVDKYKEMLVKKAEEQGAEFISFDAVNGEWKFRVKHFSSYGFGEAEIVSC</aaseq>

Gene Sequence

<dnaseqindica>1..19#398..805#1802..2272#2533..2748#3028..3578#3742..3805#3905..3965#4261..4399#4551..4667#4783..4960#5207..5817#ATGTTCGGCTCCAGCAACCGTAAGCGCCTCCCTCACCCCGGATTCTCTCCCCCCGCCGCATCCACCACTTGTTCGGCCGTGCCCTAGCTAGGGTTTTCTCGCTCCTCACTGCTCCGCGCCTCATGTTAGTATCGGCGTTGTTATTTCTGCTAATACTGCTCCACAGATCTCTACGATGATCCGCGCCGCATGCCGAATCGTAGTGTTGATGGCACGGGATGTCTTGTTCCACTGTTAATGGCATTGTGGATCATGTTTTCGGCGAATCGATATCCCGCGATGTGTCGCGTGCTAATTGTTTTCATTCTTGCAATGCTACAAGTGTATATGGACATCTGCTATATAGATAGCATATTGATATATGATTAATGTGATATGATATGTTTGTTCCTCGCAGCATTTGGGCAGTCGTCCACTAGCCCTTTCGGCCAGACCTCAAGCAACCCTTTTGGGGCCCAGACAGGATTTGGCCAGGCCAGCACCTCCACCTCCAATCCGTTCGCGCCGAAACCATTTGGCAGCCCGACCACCACGTTTGGGGCACAGACAGGAGGCTCACCTTTTGGCACGACGTCCACGGGGGCCTTTAGCCAGCCGTCCACTCCAGCGTTTGGCTCCACGTCCACAGGTGCCTTTGGCCAGCCATCCACCCCGGCGTTTGGCGCGACGTCCGCTGGGGCCTTCGGCCAGCCATCCACTCCGGCGTTTGGCACTCCATCATCCTCTCCATTTGGGAGCTCTGCGCCAGCTTTTGGTGCATCACCAGCCCCTGCATTTGGCGCCACATCGTCCACCTTTGGCAGCGGTTTGTACTTCTGGCATTCATTTTCTTTCCACATTATCATTTTCTTCAACTTAGAACTAAGCACTGTTCACTTTTATCGGACATCCACTGGTTGCACATATTTTCTCAGCATTTCATTCGTAGCATAGTAAAACTGTCTGTAAAGCTGTCCTGGCTCTATTCAATATACAGTACTTCCTCCGTTTCATATTATAAGACTTTCATGTGGGCAATGCTAGAAAGTCTTATAATATGAAACGGAGGGAGTAGTTTCTAGCTTGATGGGCATTTCCTTTTCTGTTACGTGCGATTATTGAATCCTGTTTCTATAAATTGATTCTCCCACGATTGTTTATGCAGAAAAAATGCAATGCTAGAAAATATGTTCTTATTTGATTTGATTTTTTACTGCCGCTGCTGGTTGCCTATGTTTGCTGAAAAGTCTAGAATAGAGTTGGTATATACTGTCGAGTGCAATCTCCAATTGTGTATCTAGGACAATAGTTTGAAGCTGAATTTGCAATCTATATTGACTATTTTCAGTTTTTTTTGGTTGTTTGAAGTTCGTGATAGATGACATGACAGTGTTTCTTTGAATCAAAACTAGCGAGAAAAAAAAGTGAGAATCTTGAGAGTACTAGTTCATTTGCCTTAAATTGTCACATACCATCCACTCCCTTTTTGTGAAAGCATAAAATAGCACTAGACTTGATATGTGTGTGCCTGCTGCATCATAGTTAAGAATGGTAAACTTGCTTAATGAAAGTACAAAGGCTGACATGAGTATCTTGTAGGTTCTCTCTTAGTAGTAAGCTCCACTGAGTATTTCGATTAACCATGGTTATATACCAGAACATTGAATCATGGCGTGTTATGATTTCTACATTTGTTATACAGATGCTCAATTGAATTTTCCTGAATAGTGGGCTAGTGGCAGCCCACAATGTTGTTGTTTTAATTGCTCTTCAGAGCTATCATTTTGTATGACATGTGACACAACAATCCGCAAATTTGCAGGATCATCATTGTTTGGACAAAAGCCAAGCTTTGGTGGTTTTGGTTCCTCTCCTAGCCAATCCAATGCTTTTGGAGGCACATTCCAGCAAACACAACCAGCATTTGGTAGCAGCACTTTTGGTGCATCAAGCACGCCGGCCTTTGGTGCCACAACTACACCAGCATTTGGTGCCACAACTACACCAGCATTTGGCACCACCACCCCAGCATTTGGTTCAACATCGCCATCATTATTCGGTGCTACCAGTGCCCCAGCATTTGGTTCTAGTGGCTTTGGATCTTCAGGTACCCCAGCCTTCGGTGCAAGTAGCACTCCAGGATTTGGAGCTTCAAGCTCAGCTTCATTTGGCACATCAACGAGTGCTTTTAGCTTTGGCTCTTCACCATCTTTTGGTCAAACAGCATCTACATTTGGTAGCACTCCTTTTGGAACATCTACATCTCCTTTTGGTGCACAGACTTCTCCATTTGGTAAGTTTTCATTTTGTTTCTCACTCAGTTATGTTTCACAAGTTGGGTTGCTTAGTTGTGACACACCATGTTAATAGTCTTCCCCTGACATTCTATAACTGCTTTATGTCAGGTTCTTTTGTTATGACTCTATGTCTTGCATCTGTGAACCTTTTCTTTCCCTTCTTTCCCGCTGATAGCTTAGTCCCTTTTTTTTTATCATGGCAATCGCATGTTTCATCCATTCCATCTTGAATGTGTCTTTTTGGGGGGAGTTTCAGGCTCACAGACAGCAGCACCGACATTTGGGCAAACATCATTTGGGAACCAAGCAGGAGGAACCAGAATTCAACCCTATACTCAAACTCCAGACGCGGATAGTGCTACAAGTGGTGCTCAGCCCACTGCAAAGTTGGATTCTATATCAGCCATGGAGGCATACAAAGCGAAGAGTCATGAAGAGTTGAGGTGGGAGGATTACCAACGTGGAGACAAAGGTGAGGCATTTTTGGGAGTGAGTTGATTGCTTCATTTACTAACAATCTCTTGAACCATTATAGTTAATTGTATTTGCATGTTTAAAAGAAACGAAGTAATTATCATGTACTAGCTTCTGCTACAGTGTAAAGTGTTTTTTGTTGATTAGAATGATAAAATCTAGTGATAAAACAAGGTCCTTTATGCTCCTGTAGCTCATTCTGCATTATTATATGCTTGGTTCCATGTGCCTTTTTTCTTTATCACTTTTGAGTAACTCTTGATTTTTGAACCTTCAGGTGGACCTAATCCTTCAGGAACTCCAGCAGCAACCCCTAGCTTCCCATCCCCACTGAACAATCAATTTCCCCAGAACCCTTCAAATGCATTCCAAACTTCAAATGCATTCCAAACGACATCCGTTAGCAATCCATTTGCTGCCAAGCCTTCCACTGGTTTCGGTTCTACTTCCACAACATTGTTCAATTCACCATTCAATAATACATCAGCAGCAAGCTCAAGTCCATTTGCATCAACTACAAGTAGCCCATTATTTACACAAACAAGCAGTTCTCTGTTTGCAAATTCTACTCCTGGTTTTGCTTCTTCTTCTCCGTTTGGCGCATCATTATCAAACCCCAGTTCATTCAGTACTGGCTTGTCCTTGGTTAACACTCAATCAGCTGGGCTATTTAGTTCTTCCCCGGCGTTTGCGCAACAGCCATTTACCCAGGCATCATCAGGGTTCGGATTGAGCACTCCAGCTTTCTCTACTGGAAGCCTATTCAGCACACCTACCCCTGGAATGACTGGTGGACTGTTTGGCAGCATGTCTTCACCCTTTTCATCAGTAAGCATCCGTCTTCTAGTTATTTTCATATTTAGGTTGGATTGATTTTCCTTATAACACTGATACATCTATGATCTATCTTATTCTCTTCTCATGTACTCCTTATATTTACTTGTTAAAAGTATCACTGCTAACAACATTGACTTTGCTCCTTCTGATTCAGACGGCGTTTCAACAATCTGCCCCTACTCCAAGCATGTTCTCCTTCCAACCTCAAACTCAAACAGGTTTGTGTTTTGTCTCCTAATCAATCTCAGATTCTTTTACTTGGTTAAGCAAAATTGGGTTAACTTACTTTTGTGCTTGTGCATGCATGGTTACTGCAGCTCCTACTGGTGGATTTCCTGGCATTTCCAACACTATGAATCAGGCACCTTTTGGACAGCCGTATGATATCTTTCATTTACTTTTTGAATGCAAATAATTGTTCATTTCCTTTTTTATCTATTTCATTTTAGGTGGGGCCACTGGTTTGCTTAGTATGCACTATGTTGAAGTTAAACTACAGTTTGATAGTTCATACTGATATTTAATGCCGAGATTAATAGAACAAGGTTTTGAAAAGTATCACAATTTAGTTGCCTTTACAAATGAGTTCTGGGCAAGCCTATTATGTGGGACCCATTCTTATGACAGGCTAACATCCTCTAATTTGTAACTTCCTATTTCATATTGAATGCAGAACTCCTAGCCAGTCCAATATGGTCATGCAACCAGCTCTTGTTACAAATCCCTTCGGTACTCTGCCAGCAATGCCTCAGATGTCCATTGGGAATGGTGGATCAGCCCCTTCTGTTCAATATGGAATCTCAAGTTTGCCAGTTAGTATTATTACTGTCTTAACTATTTTGATTGTTAAAGTAGAGTGCATGAGCACCTGAGCTTACTATAGAAGGATTGTTAGCAAGTTTGTCTGCTGATTGAGATACAAGAAAAGTGCATAGCAGATTGAGACATTCTACTCTTTTGCAGGTTGCTGATAAGCCTCTTACGAACAGAACATCATTATCCATGGTGGTTCCTAGGCATTTGTCGCAGAGAAGGATAAAAGTGCTGCCCAGAAAATATAATCCGATATCTGATGGCAAGGTATACTTGCAAGTTTGTATCACAATATGTTTTATGATTTTTGTTGTTTGGGGTGTTCTGCAAGCATTAAGAAAAAACACATTAAACATGATGATCATCTTTTTTATTCCTTTAGGTCCCATTCTTTGCTGATGACGAAGAATCTCCTGCAACACCAAAAGCTGATGCGTTTTTCATTCCTAGAGAGAACCCGAGGAATCTTATAATCCGTCCAATTGATCAGTGGCCTTCACGTGGCACTGTTGACAGGCAGCCAATTCCAAAGAATTTAGTTGATACAGATAAACATAAAGGTATTTCTTGTTAGTGCAGTACTGAAGCCTACCTTGTGGACATGCAGTTTTATAGCATTAAAGATTTATATCATACCCCATTCTGTCTCCCTTCTATGACGGCTTTTGCAGCATTGTAAATCATCATTTAGAATCATTTGTTTCGTTCATTTTGCCTCGACTACCAGCCTACCATGGCATACTTAACTGTTTTACCATGAACCTTAATGTGCAATTATCAGTTTCTAATTTAACGATGTTTTGCAGGCCCTCTGGCTATTTCACCAACCAGGTCTACTTCAATCGAAAATGGCATCCAGCGTGATGACCGTGCATCAAATGAGCCTGATACTGTGACAAGGCATGGGAATGGTACTTCTGTTGAGAGGCTTGTGCCTAAGCTAGTGCATGCCGATTATTATACAGAGCCTAGTCTGGAGGAGCTTGCTGCCAAAGAACGTGCTGAACCAGGCTACTGCAGTCGTGTGAGGGATTTTGCTGTGGGACGTCATGATTACGGTAGCATCAAGTTTATTGGAGAAACGGACGTGAGGGGCCTTGATCTGGAGTCCATTGTGGAATTCAATAACCGTGAAGTGATCGTCTACAAGGACGATAGCAAGAAGCCCCCTGTCGGTGAGGGTCTGAATAAAGCTGCCGTGGTGACCCTTCTCAATATCAAGTGCATGAACAAGAAGACGGGGGATCAGTACACAGAGGGTCCGAGGGTGGACAAGTACAAGGAGATGCTGGTGAAGAAAGCTGAGGAGCAGGGTGCTGAGTTCATCTCTTTCGATGCCGTCAATGGCGAGTGGAAATTCAGGGTCAAGCATTTCAGCTCCTATGGCTTTGGTGAAGCTGAAATCGTCTCTTGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037053