BGIOSGA037157

From RiceWiki
Revision as of 18:33, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA037157

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037157, complete gene.

LocusTag

OsI_37817

Ensembl Transcript ID

BGIOSGA037157-TA

Ensembl Protein ID

BGIOSGA037157-PA

Length

6096

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:5782998..5789093

Sequence Coding Region

5782998..5783358,5783750..5784557,5785642..5785727,5786803..5786909,5787230..5787267
,5787637..5787811,5787879..5787923,5789013..5789093

Genome Context

<gbrowseImage1> name=IndicaChromosome12:5782998..5789093 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:5782998..5789093 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGTTAAACCGCAAAGCCCTAAACCTATTCGATTCGAATCCGATGGAAGGCGGCGATTGCCGGCGGCCAGCCTCCGACGCTAACGAGGAGGCCGCGGTTGCCAGTCGCCCTAGCTCTAGGAAGAGGAAGGCGATTGAGGATTTAGAGGAGGAGGAGGAGGTGGATTTGCAGCCGGAGGAGGAGTCGCGTCCGCCGGCGCCGCCGGCGAAGGGTTTGTCGTGTCTGCCGGCGGCGTGCCATGAGGACGGCATCATCCCGGCTTTTGTGATCCCGGGCAGCAAGCATCGCGACGGCTCCATCTACAGGAAGGATGCGCACTACTGGCACGGCCTCTACCACCTCGACGACACCAGCGAAACTCGCCTGGAACCGATGACACCATCGTATTCAGAGCAGGACTGCAGGCCATGCGTCACCGATTGCCAGTGGCACATTGGTTGCTCCATGATGCAGATCTTCTCCCTCGAGCTAGCCGAAATCTCAAATTTCGCCACCGGAGCTGCTGGTGCCGGTGCTATTCAGCTGTATGGGTTCATGGCTGCGCGGGATCTTTTGGACCCGCTGCGAAACTACGTCTTCAACCGCACCAGGGACGATCCGTTCACCATCCGCGACGTCTCCTATCCGTTTATACAGATGACTGGCCCTAAGAGGGGCATCACGATGAACTCCCGCGTGATGATCGAGTACGACCTGAGGATCAAGAGGGGAGAGAATGAACAAGATGATCTGGTGCTCATCGACGGGGCTGCCACCTTCAGCGAGATAACGAATTTCATACCATACATTTATCGCATCCATGGGGATTGCGGCATGGCGGTGGACATAACGCTAGCACACTTCATCCTTGCAATTGAGGCAACGTTGCAAGTTCGAATATATGAACTAAAGGATGGCTGTGGCAGCCTAAACTTGACTATAACTTGTCGTGTTAGTCATATGACCCCACAAATTAAGCTCTTTCAAGATCCCATTGATAAGCTACGTGACCAAAATAGGTTTGTGGTTGTTGCAACACTGAACACTTTGATGATTACAGAGTTCAAGCTAACACAACAGCATGGCTCAATCAGTCGGAGATTTGAGTCCAGGGTTGTACCACATGGAAGTATGTCTCATTGCGCCAAGTTTGCGGATTTAGCCACTATAGGTGTGGAGATCTTTTGTTGCAGAATTAGGTGTAATAATTTGCAGGTGGTGAATGAAATGTGGGCGTCTTGGGAACTACCGGAGGGCTCAATTTCTGCTGGAGCTGTTTTGAATTGCAAGCTCTATGACTTCTGTGGTGAAGAGAGAGACCTTTCTGAGATGGATGCTGCTCATCTGATAAGAGAATTTGATATTACTGAGCTTGACAAGGCAGGTTCATACTTGAAGGATGTGTTATTCTACATGAGCCAAAAGCGCCAATATCCTAACAGGGCTGGTCCCACACCTCTTCCCTGGGGGATTGACTCACCTACAAATGCAGATGATACAGTGATTTTTATCCCATACCTTGCTGTGACCAAGTTCCTTCTTTACTGCTTTGAGGACATGTCTGGTCTAAAGATTAACTATGATAAAGGCAAGGTTCTTCCCAATGAAGTATCTAGTTTTACCCATCAGCCACAAAAGTGGAGTAGGTCGATGCGCAAAGGAGAAGAAGCTCAAGCGGAGTCGATGGCGGTGAAGATCCTAGAAGTTACCCTGGTTTAG</cdnaseq>

Protein Sequence

<aaseq>MQLNRKALNLFDSNPMEGGDCRRPASDANEEAAVASRPSSRKRKAIEDLEEEEEVDLQPEEESRPPAPPAKGLSCLPAACHEDGIIPAFVIPGSKHRDGSIYRKDAHYWHGLYHLDDTSETRLEPMTPSYSEQDCRPCVTDCQWHIGCSMMQIFSLELAEISNFATGAAGAGAIQLYGFMAARDLLDPLRNYVFNRTRDDPFTIRDVSYPFIQMTGPKRGITMNSRVMIEYDLRIKRGENEQDDLVLIDGAATFSEITNFIPYIYRIHGDCGMAVDITLAHFILAIEATLQVRIYELKDGCGSLNLTITCRVSHMTPQIKLFQDPIDKLRDQNRFVVVATLNTLMITEFKLTQQHGSISRRFESRVVPHGSMSHCAKFADLATIGVEIFCCRIRCNNLQVVNEMWASWELPEGSISAGAVLNCKLYDFCGEERDLSEMDAAHLIREFDITELDKAGSYLKDVLFYMSQKRQYPNRAGPTPLPWGIDSPTNADDTVIFIPYLAVTKFLLYCFEDMSGLKINYDKGKVLPNEVSSFTHQPQKWSRSMRKGEEAQAESMAVKILEVTLV</aaseq>

Gene Sequence

<dnaseqindica>1..361#753..1560#2645..2730#3806..3912#4233..4270#4640..4814#4882..4926#6016..6096#ATGCAGTTAAACCGCAAAGCCCTAAACCTATTCGATTCGAATCCGATGGAAGGCGGCGATTGCCGGCGGCCAGCCTCCGACGCTAACGAGGAGGCCGCGGTTGCCAGTCGCCCTAGCTCTAGGAAGAGGAAGGCGATTGAGGATTTAGAGGAGGAGGAGGAGGTGGATTTGCAGCCGGAGGAGGAGTCGCGTCCGCCGGCGCCGCCGGCGAAGGGTTTGTCGTGTCTGCCGGCGGCGTGCCATGAGGACGGCATCATCCCGGCTTTTGTGATCCCGGGCAGCAAGCATCGCGACGGCTCCATCTACAGGAAGGATGCGCACTACTGGCACGGCCTCTACCACCTCGACGACACCAGCGAAAGTAAGCAAAGCATCAAAGCATCTCCGATTCCCCCCAGTTAATCCCACTACTCCCCATCTGCTGTCAAACTTTTCATCAATTTAACAGTTATCTGTTCTCCATTTTAATCGTTTGACTTTTTATTTAGTCAAACTTCTTTGGGTTTAACAAGTTTATAAAAAAAATAGCTAGCATCTAAAACACCAAATTATTTGTAAAATGTAACATTGAATAATTTTGCTAATATATTTGTTTTGTGTTGGAAATATCGTTATATTCTTTCATAAACTTGGTCAAATTTTAAAAAATTGAGTAGAAAAAAGTCAAAGCCATTTATAATACGATGAAACGGAAACGGAGAGAGTAGTATATACTAATCACTGTTTGCTTAATCGATCCATTCCATCATCAGCTCGCCTGGAACCGATGACACCATCGTATTCAGAGCAGGACTGCAGGCCATGCGTCACCGATTGCCAGTGGCACATTGGTTGCTCCATGATGCAGATCTTCTCCCTCGAGCTAGCCGAAATCTCAAATTTCGCCACCGGAGCTGCTGGTGCCGGTGCTATTCAGCTGTATGGGTTCATGGCTGCGCGGGATCTTTTGGACCCGCTGCGAAACTACGTCTTCAACCGCACCAGGGACGATCCGTTCACCATCCGCGACGTCTCCTATCCGTTTATACAGATGACTGGCCCTAAGAGGGGCATCACGATGAACTCCCGCGTGATGATCGAGTACGACCTGAGGATCAAGAGGGGAGAGAATGAACAAGATGATCTGGTGCTCATCGACGGGGCTGCCACCTTCAGCGAGATAACGAATTTCATACCATACATTTATCGCATCCATGGGGATTGCGGCATGGCGGTGGACATAACGCTAGCACACTTCATCCTTGCAATTGAGGCAACGTTGCAAGTTCGAATATATGAACTAAAGGATGGCTGTGGCAGCCTAAACTTGACTATAACTTGTCGTGTTAGTCATATGACCCCACAAATTAAGCTCTTTCAAGATCCCATTGATAAGCTACGTGACCAAAATAGGTTTGTGGTTGTTGCAACACTGAACACTTTGATGATTACAGAGTTCAAGCTAACACAACAGCATGGCTCAATCAGTCGGAGATTTGAGTCCAGGGTTGTACCACATGGAAGTATGTCTCATTGCGCCAAGTTTGCGGATTTAGCCACTATAGGTGTGGAGATCTTTTGGTCAATCTTACCCACTTCGCTACAAGAAGGCTTTTGAGCCTTCTACTTTGTTACATTCTATTTATTTTCAGGCAAAAAATCACCTACCTGTAAATAGCTAAGAGCAATGCAAGTTTTTTATTAGGATTTGTGCCATATATATTGCCATATGAACCAGAACCAACCAAGGCTTCATGTGTATGTCAATTGTTGGGCAAACCTTGCCATATGAGCAAAATATATTTTTTTTTCTTTCAATTGATTTTGTGGCTGTTGAATTTGCACGGAGATTGGGATATCAACCACAACAAGCACTTTTAGCAGTGATTACGACTCCTTCCAGGGCACCAGTAAGTTGATGATGTGATATACCTACCTTTTTTGTTCTTCTCTTTGCTTTGGATTTCTTGTTCTAACTTCACTCAATCAGCTAGGAAGAATATTTATGCAAATTTATATTTTCCTGCCTCTACCCTACTCCATATTGCTACTAGATAATACTACCTCCATATTTTAATGTATGACGCCGTTGACTTTGTCCAACGTTTGACCATTCGTCTTATTCAAAAAATTTATGTAATTATCATTTATTATTATGACTTGATTCGTCATCAAATGTTCTTTAAGTATGACATAAATATTTTTATATTTACACAAAAAATTTGAATAAAATGAATGGTCAAACGTTTGTCGAAAAGTCAACGGCGTCATACATTAAAATACGGAGGGAGTAGTATTTTCTATCTTTGTGCTCGAATACTGGCTGGCTCATGTTCTATTGACACATGGACCTAAAAGAGTAATATTTGACAAGAGGCTGGCTAAATACCTGGTGGCTGAACTATGCAACACATTTAGCATGTCACACAAGTGGTGTGTTTCCTAATACACTCAAGCCTGTACAACAAATTCTGCTTCAACAAGTAACTAGAACAAAAATTCACCTGTCGATGACTACATATGTTTGGTAAAGAAGCATCTGAAATATTCCATATTAGTAGGTGCTAATACAACTTGGCTGTTCATTTAGTGTAATGAATTCTGGCAGATTGGTGTGAAATATGCCACAGTTTCTGCTTGTTTGGCTTTTCTTTTTATTTTGGAGTTGCAGAATTAGGTGTAATAATTTGCAGGTGGTGAATGAAATGTGGGCGTCTTGGGAACTACCGGAGGGCTCAATTTCTGCTGGAGGTGAGTAGTAAATAAATTAATCACAAATTCATGGTTGGTCCTACACGAAATGATGGGATTGGGGAGGGGAACGTTCTATGCATTTTATGGAAAATTGTGACAACTTCTACAGTGCCTGTGCACTGTTTGATGTTTTGTCTGAAAGGGAGAGTTTTATTTGGAACATATTTTATGTTACAAAGGAGGGAATTATGACTACTAGTTCGTGATGCCTGCTGCGTTGCAATTGCTGGGCAATCTCATGTCAAATTGCCACTTGGCAGTTCACCAGTTGACGAGTTGACTACTTTGGATGGAATTGCAAAGAGTATGAGTGGAAATGATCCTTTTCTTATTATTAATTCACCTTACAGTTCATAGGAAGTTAGACAGTCATAGGACTTAATGATATATAAAAGTATCATAGTTTTGTGGTTTATATGGCACACAATTCATTTTAAACTTTGTTGCTGAAGCATGGTTATGCATATGAAATGTGTTTTTCCTTGTAAGATGAAATGACAGACAAATAAGTGTATATGCATGTTCTGTTGTCTTTCTATAAAGCTGGGAAGATCTTTTGAGCGACATGTGGTAAAAAAACAGTGCGTATGCATATCCCGATAAACTAACAGAAAATCATTATTTTGGGCATGCATTTATAAGATTCATTTTGGGATGAATCTCTTTGTAGCTGAATATGATTAATTTGGGCTCCACATAATTAATCTCCTATCCTAATCACCATGGGAATGATCCTTTACATAATCACATGATTATGCAACTTTCCTGCTAATGTAGGTTGTCCCTGTTGTGGACGGAAAGGGAAATGTTGAGTTATCAGTAACAGGCTTTACGCTATTCCTGATAATAAAAAGGAATCCTCAACAATGAAGAGATTTTGGTAAGCAACTATCTTTGTTGATAACTGATAAAGCCGTATAAACATTTATTTCCGACAAATTAGTACTGGTGATTCATCTTAACATTGCTTTGACAGTACGTGCATTTTACTGATAACTTCAGTCAAAATGTCTATGTTCTTACAACCAATCTGCACTGAGCCTCCTGTAACCATAGTGTATTTCCCATACAGCTGTTTTGAATTGCAAGCTCTATGACTTCTGTGGTGAAGAGAGAGACCTTTCTGAGATGGATGCTGCTCATCTGATAAGAGAATTTGATATTACTGAGCTTGACAAGGTAATCAAGGAAGCAAAACTAAACCTTGCTCCTGGTCCATATGGCTTCCCTGCACAATTCTATAGACAATTCTGGCCACAGCTGAGACAGGGTTTGTTTAAGATGCTGCAACTGCTTCATGATGAAGAGTTAGACTTAAGGAGGTTGAACTTTGGTGCCATTACCCTAATCCCTAAAATTCCCTCCCCTACCTCAATCAAGCAATTCAGATCCGTCTATGGGCTAAATTGTTCCCTGAAGTATCAGCAAAGTTCTGACAAACAGACTGTCTGTAGTGGCTCCATCCACCATTTCCTCAACACAAACTGCTTTTATTCCAGGCAGGTTCATACTTGAAGGATGTGTTATTCTACATGAGGTGATGCATGAACTAAGGAGAAATAAACAAAGAGGCGTGATTCTGAAACTAGATTTTGAGAAGGCTTATGACAGAGTGAGATGGGGATTCGTTTATGGGGTGTTTGACAGTGATTCTGACACTAGATTTTGAGAAGGCTTGACAGAGTGAGATGGGGATTCGTTATGGGGTGTTGGACAGAAAGCATTTTCATGAAAAATGGATTCACTGGGTGAAAAGCTGTATAGAAGGTGGAAAAGTCTGTATCAACATAAATGGGTAGAGATCTAATTTTTTTCAGCACTTACAGAGGCCTCAGGCAGGAGGATCCTATCTCTCCGCTGCTCTTCAATTATGTGAGTGATGCGTTGATCCAGCTATTTGATGCAGCCAAAAGCGCCAATATCCTAACAGGGCTGGTCCCACACCTCTTCCCTGGGGGATTGACTCACCTACAAATGCAGATGATACAGTGATTTTTATCCCATACCTTGCTGTGACCAAGTTCCTTCTTTACTGCTTTGAGGACATGTCTGGTCTAAAGATTAACTATGATAAAGGCAAGGTGTTTGCTGTGGGGTTGGAGTAAAATGAGTTGAACAGAGTTGCTAACATGCTCAACTGCCCTGCAGGTTCTTCCCAATGAAGTATCTAGTTTTACCCATCAGCCACAAAAGGTAGGGATCTCTGAGTTAAATCCTACCACATAAGTTAGAAAAGATGTCTCATCAAAAAAAAGTTAGAAAAGAGGTTGGGTACAGTGGAAGTCAAATTTCTCATCTGGGGGGAGAGATATCCTTATCAATTCTTGCCTATCATCCATTCCCTCCTATACAATGGGTTTCTATCTCTTGCCAGAATGCATTCATCGCAAGATCAACACAGTTAGGAGCAGGTTTTAATGGGCAGGTAATGGCTCCAAGAAAAAAAATACATGATGAAATGGGACCATTTAAGCAGTCCTAAAGAGTTTGGGGGCATGGGGTTCACAGAAACAATGAAGTATAACACGCTCTGTTATCCAAATGGATTTGGAAGCTGGAATCAGGGGACATGAGCCCCTGTATAGAGCTGTTAAGAAGAAAATATCTACAGATCAAGGGGTTTTTCCAATCTGAAAAGGAGGGAGGATCACAATTTTGTAGAAGCTTGCACTCAATTAAATTCTGGGTCCAAAACAACTCTGAATGGAAATTGGGATAAGGAACTCATATCTCTTTCTGGTCAGATGTTTGGACTGGGTCCTGTCCTTTGAAAACAAATCTGTAACCAACAAGAGATTCTGGTGCCTGATGCTCTGGCCTCTTGGCCTGAGGGGATTTCTTTCAGAAGGTCTTTTGGCCCGGTGGAGGTGGAGTGGGAAAACCTTGGGCAACGAATGGCTGAAATCTCTTACTGATGAGGAAGACATGATGCTTTGGCCTTTTGAGAAGAACAAATGCTTTTCTACAAAGTCTTGCTACAAAATGCTAAACTTTCATGGGGTGAAAGATATGAGAGGACTAGATATTTGGCAAGAGCCAATGCCCCAGAAGGTAAAGCACTTTGTATGGCTTGCTTGGAAAGATAAGATTCAATCCACCTCCTATCTGGTTAAGAAGAATTGGGAAGGATCTGAGAGATGCATTCTTTGTTCTGAGATAGAAGATGCCTGGCCAGAAAATGAATGAAAAGGGTCTTATGCTGCTCAGCTGCTGGGTGCAGCGAACAAAATCTTGTCCACACCTCTAACCCTTGTTTTTCGTGTGATTTTCTTCCTTTGGCAGTGGAGTAGGTCGATGCGCAAAGGAGAAGAAGCTCAAGCGGAGTCGATGGCGGTGAAGATCCTAGAAGTTACCCTGGTTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037157