BGIOSGA037235

From RiceWiki
Revision as of 18:33, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA037235

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037235, complete gene.

LocusTag

OsI_37983

Ensembl Transcript ID

BGIOSGA037235-TA

Ensembl Protein ID

BGIOSGA037235-PA

Length

6264

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:8279832..8286095

Sequence Coding Region

8279832..8279912,8280008..8280346,8280457..8280561,8281057..8281167,8282615..8282865
,8283201..8283324,8283619..8283895,8284386..8284531,8284623..8284772
,8284854..8285086,8285427..8285556,8285587..8285691,8285817..8286095

Genome Context

<gbrowseImage1> name=IndicaChromosome12:8279832..8286095 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:8279832..8286095 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTCCTAAGAACTCACGTTTTGTGTTCCTCTCAGCTACCGTGCCTAATGCCAAGGAGTTTGCTGACTGGGTGGCTAAGGTACATAAGCAACCTTGTCATATAGTATACACTGACTACCGGCCTACACCTCTCCAACACTATGTATTTCCTTCTGGAGGTGATGGTTTATATCTGGTAGTTGATGAGAAGAGCAAGTTCAGAGAGGATAGTTTTCAGAAAGGTTTGAATGCGCTTGTCCCTGCTAGTGAGAATGACAAAAAGAGGGAAAATGGGAAGTGGCAGAAAGGTCTCTTGACAGGAAAACCTAGTGAGGACAGCGACATATTCAAGATGGTGAAGATGATAATTCAGCGTCAATATGACCCAGTCATACTTTTTAGCTTTAGCAAAAGGGAGTGTGAATTTCTTGCTATGCAGATGGCTAAGATGGACTTGAATGATGATGATGAGAAGGCAAACATTGAAACAATTTTTTGGAGTGCTATGGATTTGCTTTCAGATGATGATAAAAAGCTTCCCCAGGTTTCAAATATGCTTCCCTTATTGAAACGTGGCATTGGTGTACATCATTCTGGTCTTTTGCCCATTTTGAAGGAAGTGATTGAGATACTCTTCCAAGAGGGCCTTATCAAGTGTTTGTTTGCCACAGAAACATTCAGTATTGGTTTGAACATGCCTGCAAAGACTGTTGTGTTTACCAATGTGCGAAAATTTGACGGTGATCGATTCAGATGGTTGTCAAGTGGAGAATACATCCAAATGAGTGGCCGTGCTGGTCGCCGAGGTATTGATCAGCGTGGTATCTGTATATTGATGGTAGATGAGAAAATGGAACCTTCAACTGCCAAAATGATGCTGAAAGGAAGTGCTGATAGTTTGAACAGTGCCTTTCATTTGAGCTACAATATGTTGTTAAATCAAATACGCTGTGAAGATGGTGATCCTGAAAAGCTTCTTCGGCACTCATTTTACCAATTTCAAGCTGATCGAGCTCTCCCTGATCTTGAGAAGCAAGTCAAGGAGCTGGAACTAGAGAGAAATTCCATGATTATTGAGGAGGAAGAGAACCTAAAGAGTTATTATGATCTCTTGCAGCAGTACAAAAATCTAAAGAAGGATGTCCGCGATATTGTTCATTCTCCTAAATATGTTCTACCTTTCTTGCAACCAGGAAGGCTTGCTCGCGTTCAGTACAGTACTGATGAGCAATCCACCTTCTCTATTGATGAAAACATCACTTGGGGAGTTACAATAAACTTCGAAAAGGTGAAAACCCATAGTGAAGATAGGAGGCCTGAGGATTCTGATTACACAGTTGATGTTCTCACAAGATGTTCTGTAAGTAAGGACAAAAGTGGAAAGAAGACAATGAAGATTATTCCTCTGAAAGACCGTGGAGAACCGGTTGTCATTTCCTTGCCACTTTCTCAGATTGATGGACTAAGCAGCATTCGGATGCACATACCAAAGGATCTTTTGCCTGTAGAAGCTCGAGAAAACACATTGAGGAAAGTTGATGAAGTTATTTCCAGGTTTGCTAAAGATGGGATCCCTTTATTGGATCCAGAAGAGGATATGAAAGTACAATCAAGCTCTTTCCGGAAAGCTTCCAGAAGAATAGAAGCTCTTGAAAGTTTATTTGAGAAGCACGATGTCCACAATTCTCCACATATTAAACAAAAGCTAAAAGTGTTGCATGCTAAACAAGAATTATCAGCCAAAATAAAGGCCATTAAAAAAACAATGCGGTCTTCAACTGCTTTAGCCTTCAAAGATGAGCTCAAGGCCCGAAAACGGGTTCTTCGTAGACTGGGATATATTACAAGTGAGGATGTTGTGGAAGTGAAGGGCAAAGTAGCATGCGAGATAAGTTCTGCTGATGAGCTAACATTGACAGAGCTTATGTTTAGCGGCACTCTGAAGGATGCTACAGTAGAACAGATGGAAAAGCTTCAGGATGCCCCAAAGCCAAGGGAGGAGCTCGACTTGCTGTTCTTCCAGTTGCAGGAGACAGCTAGAAGGGTTGCTAACCTTCAGCTTGAATGCAAGATCCAAATTGACGTGGAGAGTTTTGTGAACTCTTTCCGGCCTGATATAATGGAAGCGGTGTATTCATGGGCCAAAGGATCCAAATTCTATCAAATCATGGAGATGACCCAAGTATTTGAGGGCAGCTTGATCAGGGCTATCAGGAGGCTTGAGGAGGTCCTGCAACAGCTAATTCTGGCATCGAAGTCCATCGGTGAAACCCAATTGGAAGCAAAACTTGAGGAGGCTGTCAGTAAGATCAAGAGGGATATAGTGTTTGCAGCATCTTTATACCTGTAA</cdnaseq>

Protein Sequence

<aaseq>MAPKNSRFVFLSATVPNAKEFADWVAKVHKQPCHIVYTDYRPTPLQHYVFPSGGDGLYLVVDEKSKFREDSFQKGLNALVPASENDKKRENGKWQKGLLTGKPSEDSDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKMDLNDDDEKANIETIFWSAMDLLSDDDKKLPQVSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDRFRWLSSGEYIQMSGRAGRRGIDQRGICILMVDEKMEPSTAKMMLKGSADSLNSAFHLSYNMLLNQIRCEDGDPEKLLRHSFYQFQADRALPDLEKQVKELELERNSMIIEEEENLKSYYDLLQQYKNLKKDVRDIVHSPKYVLPFLQPGRLARVQYSTDEQSTFSIDENITWGVTINFEKVKTHSEDRRPEDSDYTVDVLTRCSVSKDKSGKKTMKIIPLKDRGEPVVISLPLSQIDGLSSIRMHIPKDLLPVEARENTLRKVDEVISRFAKDGIPLLDPEEDMKVQSSSFRKASRRIEALESLFEKHDVHNSPHIKQKLKVLHAKQELSAKIKAIKKTMRSSTALAFKDELKARKRVLRRLGYITSEDVVEVKGKVACEISSADELTLTELMFSGTLKDATVEQMEKLQDAPKPREELDLLFFQLQETARRVANLQLECKIQIDVESFVNSFRPDIMEAVYSWAKGSKFYQIMEMTQVFEGSLIRAIRRLEEVLQQLILASKSIGETQLEAKLEEAVSKIKRDIVFAASLYL</aaseq>

Gene Sequence

<dnaseqindica>1..81#177..515#626..730#1226..1336#2784..3034#3370..3493#3788..4064#4555..4700#4792..4941#5023..5255#5596..5725#5756..5860#5986..6264#ATGGCTCCTAAGAACTCACGTTTTGTGTTCCTCTCAGCTACCGTGCCTAATGCCAAGGAGTTTGCTGACTGGGTGGCTAAGGTTTGTTGCCACGCTTCCCTAGAACACATTTGATCAAGCATTTATCAGCATTTGATCTATCTTCTTTGACCATAAGAGAGTGCTTTATTTCTCAGGTACATAAGCAACCTTGTCATATAGTATACACTGACTACCGGCCTACACCTCTCCAACACTATGTATTTCCTTCTGGAGGTGATGGTTTATATCTGGTAGTTGATGAGAAGAGCAAGTTCAGAGAGGATAGTTTTCAGAAAGGTTTGAATGCGCTTGTCCCTGCTAGTGAGAATGACAAAAAGAGGGAAAATGGGAAGTGGCAGAAAGGTCTCTTGACAGGAAAACCTAGTGAGGACAGCGACATATTCAAGATGGTGAAGATGATAATTCAGCGTCAATATGACCCAGTCATACTTTTTAGCTTTAGCAAAAGGGAGTGTGAATTTCTTGCTATGCAGGTACGTTCTTCCGTAAATTACTGTGATTTAGAGAACATAAGATTTTATTGATTAGACAAACAGGCCGATTTAGTTTCTTTCTTTTTTACTGCCCTTCTTGTATGCTATAGATGGCTAAGATGGACTTGAATGATGATGATGAGAAGGCAAACATTGAAACAATTTTTTGGAGTGCTATGGATTTGCTTTCAGATGATGATAAAAAGCTTCCCCAGGTAAGTTGTTTTATATGGCTATGTTGATTCAGATAGGTTTTCAAAAAGACAGGATGTTTGAACTCAAGCTACTAGCACACAGGATATGTATTGCCTGTAGCTATTATGCACTTCATTTGTATATGTAGTCTTGCGGAAACTATTTTTCAAACAATCAAATGATACATCAGTCATCTTTCATTTATACCCATACATTAGGTTTTCTGGGCCTCTTCTTTTTCCCAACAAAGTTTCCTGTTTCTTCAAAGTTTTTACTTTAAAGCACATATGTGTTGGTGGAAGACTGCTATCGACATAGTAATTAGTAAAGTTGTACCAGTACCACGGCACAAGATACACTGATACCGTGCTATACCAGCATCAACAGACTAATTACCCACTAGTGCGGGGACCATTAATTGGTCCATACCTTCAACCAGTGCTTGTATTTTATCTTTCATTTAATTCCTTTGATAACTGAGCGATTGGGATAATTGAGCCATGGGGTATTCACAGGTTTCAAATATGCTTCCCTTATTGAAACGTGGCATTGGTGTACATCATTCTGGTCTTTTGCCCATTTTGAAGGAAGTGATTGAGATACTCTTCCAAGAGGGCCTTATCAAGGTTAGCATATTATATTATTTTATGTTTCCTATGACTTCTTCAGTTGCTGTTATTTCCTAGTCTTATTGCTGAAAGTGTATCAACAGTTCAATTAGCATATTGACTGACTGCTCATCTATGAAACAATGATAGTTAGAAGCAAATGTTTTGATTCATATTTTACACTTTTACTCAAGATGATTCTGGATGAACTTAAAGGGTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCGATTGCACTGTAGGGTTTGAATAGAAAAAGATATCTAAATTTTGTGAAGTCCTTTTCTTTTATGGGTTAATTAGATCTATGCCATTAAAATTTTACTGGTTTTGAAATATACCATTACTATTTGTGTATTTGTAACGATGCCACTGCTACTTGTTTGTAATTTCAGTGGTGCCACTAAGATACGTATTTTGGATGTATTGGACGAAAATACCCTCATCTTCTACCTCTCTCTTCTCTCTATTCTCTCTCTTCTACCTCTCTCTCTCCACGTTGCTTCTTGCTCCGCCACCGCTGCTGCTGCCACTCGCCGCCGCGCCGCGCCGCCGCTTGCTGCTGTCGCCACGACACTGCTCGGTGCTGCCGCCACGCCGCTGCTAACGCCGCGCCGCCGCTCGCTGCTGCTGCCTCCGCCGCCGCTCGCCGCTTGCCACCGGGCCGCTTGCTCCACCGCCGCGCCGCCGCTGCTGCTGCCGCTGCTGCCGCCGCTGCCGCCACTCGTCGCCGCACCGGTGCCGCCGCTTGCCGCCGGGCCGCTCGCTCTGCCGCTGCGCTGCTGCTCCACCACTGCCGCTGCTGCCGCTGCTTGCCACCGCGCTGCTGCTCCATAGTTGCCGTCGAACAGGAATAAGGGAGAAGAAGGGGAGGTAGAAAGAAGAAGGGCAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCGCGCTGCTGCTCCATAGTTGCCGTCGAACAGGAATAAGGGAGAAGAAGGGGAGGTAGAAAGAAGAAGGGCAATTTTGTGCAAACTTTTTTGTAAATGCATCCAAGTGGTAAATAGTGGCATGTATCAAATATGTGTAAAATTATAATGGCATGGTTCCAAATACTTGAATACTAGTGGTATATTTCCATTCCAAACCAGCATATTTTTAATGGCATGGATCTAATTAACCCTTTTTTATATTGTGATGAAATTATAATTTCAACTGCTCGTTTTATTTGAAATGAAAATGGTATCTATTTTCTGCTTTTGTGATCCATGCCATTCATTGTATTTACCTTGATGATAAAACGCTAACATAATATTAATTTTATTATCTGGAGCTTAGCATACTTGTATGCCTTATCTATTTAAGATATACCTTTTTGTTGTAACTTTTAGCTTCTTTCTGAGATTGAAACCTTGTGTTGTAGTGTTTGTTTGCCACAGAAACATTCAGTATTGGTTTGAACATGCCTGCAAAGACTGTTGTGTTTACCAATGTGCGAAAATTTGACGGTGATCGATTCAGATGGTTGTCAAGTGGAGAATACATCCAAATGAGTGGCCGTGCTGGTCGCCGAGGTATTGATCAGCGTGGTATCTGTATATTGATGGTAGATGAGAAAATGGAACCTTCAACTGCCAAAATGATGCTGAAAGGAAGTGCTGATAGTTTGAACAGGTAACTGTCATGGATTCACTGCTTATACTTAGCATTTTAGCCTGGATGAATAAATGAGAAAACCTGGGCATTGGACTGAAACTATCTGATCTATTACTAAATTAACAATGGTTATGCTTTACCAATCCTTTTAATTAAGTAGCCCGTGTTTCTGTGCATGCTATTCAGGTCCTTGTATCAAGAAACCTTGAGCTATCATACTATTGCTTAAGTTAGTTTTGGCATATCTTTCTTTTGAACTGTTATGCTTCTTATAGTTTAGAGCGTGCAATTATTTTTTTTTCCTGTTTTGCATGGTTCTCAACTTCTCATGTGATTATCCTCCTCTTGATCAGTGCCTTTCATTTGAGCTACAATATGTTGTTAAATCAAATACGCTGTGAAGATGGTGATCCTGAAAAGCTTCTTCGGCACTCATTTTACCAATTTCAAGCTGATCGAGCTCTCCCTGATCTTGAGGTTTGTTGACATTGTCAATTTATATTTATGCTTAGTTTTTGGGCATGAGGATTCCATGAGCAAATTACAAAACAATCTACCTGTTTAGTATCCAGGAAAGTGAGCAGTTCTAATTAATAATTACATACCAAAATTGATTTTTCCCTCAGAAAAAAAATGCCAGTAAACTGATTAGTGCACCCAGTACATTGGTGCCCTAGTATCACAATTAATAGCAATTCCACTAGCATAAAAACTCTGTTATTGAAGCATTATATTTGCACTTACGTATTACTCTATTTGAATTTTGTGCAGAAGCAAGTCAAGGAGCTGGAACTAGAGAGAAATTCCATGATTATTGAGGAGGAAGAGAACCTAAAGAGTTATTATGATCTCTTGCAGCAGTACAAAAATCTAAAGAAGGATGTCCGCGATATTGTTCATTCTCCTAAATATGTTCTACCTTTCTTGCAACCAGGAAGGCTTGCTCGCGTTCAGTACAGTACTGATGAGCAATCCACCTTCTCTATTGATGAAAACATCACTTGGGGAGTTACAATAAACTTCGAAAAGGTGAAAACCCATAGTGAAGGTACATAAAACTTAAATGGAAAATCTGATCCAGCCATACTGTTTTGTAGTCTTTTTCTCTTTTGTTGAAGTTGTATCCCCCCGAGTTGTTTGGCAATGCAATTCCATTATATAACCTACAAGTCTTGTAATTAGACAGTTTAAGGTGGTTTTGGAACTGAGTTTAGGTTCCAGCACAAGATATGCTTGCTGACGAGTCGCCGCTTCAAAGTTGAAATTTGTATGACCACATTTATTTTTTCTATGGTCTTGCACTTAATCTAAATGAGCTTTGGTTAATTGTGGTAGATTGATATTTGATAGTCTGTCCTGGATTTTTTTTGCAGTCATAAAAGTTAGGATCCTTTTTTTTCAGCAAATTGCATTTCATGAGTCTCATTATGTTTAACTCCAGCACTGTCTGGTTGAGAACACATGACAGGGGCATCTTATAGCTCTTGTGTCTCTCCTTACTCCTGAGTTCTGATTTCCTTTTTTATAAAAAAATTCAGATAGGAGGCCTGAGGATTCTGATTACACAGTTGATGTTCTCACAAGATGTTCTGTAAGTAAGGACAAAAGTGGAAAGAAGACAATGAAGATTATTCCTCTGAAAGACCGTGGAGAACCGGTTGTCATTTCCTTGCCACTTTCTCAGGTTATTTCCTTTTCCTATTTGACCGGTGAACTTTTTATGTTCTAAACATTTATAACAATGCAAAGTGTTCCGTTTTCTGTCTAATTCACAGATTGATGGACTAAGCAGCATTCGGATGCACATACCAAAGGATCTTTTGCCTGTAGAAGCTCGAGAAAACACATTGAGGAAAGTTGATGAAGTTATTTCCAGGTTTGCTAAAGATGGGATCCCTTTATTGGATCCAGAAGAGGATATGAAAGTAAGAAAAAAAATCATGCATATCACTCTCAGGTTACCTCTATATATGTGGTTTTAACAGCTTGTTTGTTTTTCTTTTCAGGTACAATCAAGCTCTTTCCGGAAAGCTTCCAGAAGAATAGAAGCTCTTGAAAGTTTATTTGAGAAGCACGATGTCCACAATTCTCCACATATTAAACAAAAGCTAAAAGTGTTGCATGCTAAACAAGAATTATCAGCCAAAATAAAGGCCATTAAAAAAACAATGCGGTCTTCAACTGCTTTAGCCTTCAAAGATGAGCTCAAGGCCCGAAAACGGGTTCTTCGTAGACTGGGGTAATGCTTCGATGCATCCTTTGACACTTATATTCTGATAATATGCTGATTTGGAATTCACAATGACTGTCTAATCTACATTTCTAAGGATTGCCATCCACAAGATAGATCATGTTTGTCGTATAAATTTTGCTTGCTGAAAAACAACTTTACCAGGGCACCAGATAAAAACTGACAAACACATAGCATAATTACATAACCAGTGGATTATTCTATCAAATTAGAAACAACATACACTATCTATCCCAATTGGCATGTCCTATGTTAGTTGCATGTCAAATTGTATCCATTCTTTTGTAAATAAATATAAATTCTTATCAGAGGATCAACTTTGTGACAGATATATTACAAGTGAGGATGTTGTGGAAGTGAAGGGCAAAGTAGCATGCGAGATAAGTTCTGCTGATGAGCTAACATTGACAGAGCTTATGTTTAGCGGCACTCTGAAGGATGCTACAGTAGAACAGATGGTAGCGCTGCTTTCTTGCTTTGTTTGGCAGGAAAAGCTTCAGGATGCCCCAAAGCCAAGGGAGGAGCTCGACTTGCTGTTCTTCCAGTTGCAGGAGACAGCTAGAAGGGTTGCTAACCTTCAGCTTGAATGCAAGGTAATTGATATAACTAAGCCATCATATGGATTGTTTGTAGATATAATTGTTATAAAGCTAGGTGGACTTGCTTCAGAATTGTATCTTAATGCTGAAACAAAATGTTCTCGTCTTGCCGATGACAGATCCAAATTGACGTGGAGAGTTTTGTGAACTCTTTCCGGCCTGATATAATGGAAGCGGTGTATTCATGGGCCAAAGGATCCAAATTCTATCAAATCATGGAGATGACCCAAGTATTTGAGGGCAGCTTGATCAGGGCTATCAGGAGGCTTGAGGAGGTCCTGCAACAGCTAATTCTGGCATCGAAGTCCATCGGTGAAACCCAATTGGAAGCAAAACTTGAGGAGGCTGTCAGTAAGATCAAGAGGGATATAGTGTTTGCAGCATCTTTATACCTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037235