BGIOSGA037316

From RiceWiki
Revision as of 18:34, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA037316

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037316, complete gene.

LocusTag

OsI_38148

Ensembl Transcript ID

BGIOSGA037316-TA

Ensembl Protein ID

BGIOSGA037316-PA

Length

8634

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:10833893..10842526

Sequence Coding Region

10833893..10833968,10834080..10834246,10834393..10834510,10835948..10836026,10836622..10836685
,10836818..10836854,10837758..10837843,10841482..10841577,10841679..10841838
,10841928..10842081,10842517..10842526

Genome Context

<gbrowseImage1> name=IndicaChromosome12:10833893..10842526 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:10833893..10842526 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTACAAGCAGACTGCTGATGCCGTCATGTGCATTCTCCTGCCGGATTCAGAGACCGCCGCTTTCAGAACAAAAGGTGGTTTGCTGTACGTTGATGAGTGGAACTCACTCCAGCACCCGGTGGCATCGGCGTTCCTCGCCGCCGTTTACAGCGACTACATGCAGAGCTCCAGGAAGACGGAGCTAAGCTGCAGTGGGCAGGGCTTCTCGCCGAGCGACCTGCGCAAATTCGCCAAGTCCCAGGCGGATTACTTGCTGGGCAGCAACCCGATGAAGATTAGTTGTCTGGTCGGGTACGGCGACCGGTACCCGGAGCGGGTGCACCACCGCGGCACATCTATCCCGGAGGACGTCGACACCGGAATGGATCTTATAGAATCCTATGAAATTCCTATGGATTGCCTAATACCATGCAAGTTTTGGAGGAATTCTAACATGAGGTTATTGATTAGACGCTTCGGGGTCGCGGAGATGAACTGCGAGACCTGTCAGCTGAAGGAGCTGGAACTGGAGCCTCGGGAGATCAAGGATGTGCTACGATGCATTTTGCACACCATATTCTTCCACAGAACCTTGAGCCTTGTTCGGCCCAAAGATGTTGATTGTGATTTCTTTGAGATTACCTATGTACAATGTGGACTTCCTGAATTAGAAAAGGAAGTTGATGAAAAGATTAACCAGTTTGTTGCGTGGGTAGAGAAACATCCAAATCGGAGCAGTCAGGTTTGCCTCTCCTTTTTCGATGAGAAAAACAAACTCCCAAGCTGGTTTGGCAACAAAACAGAGCGTATTTATTGGGAACAGTGGTTCATAAATTTGCATGTAATAAGCCCAAAAAGGCATGGCAAATCACATAGCTCTAAAGCACTAACAAATATTGGAGGGCAAGCATTGGAAGAGAGTAGCTCAAGACGTGCTGCCTTGGAATCATCAATTCATGAAGTACTATTCCAGATCATAAACTTTGCCAATGAGAAAAAGGACCATATTCCTCCAATCCCTGATAGAATATTCAATCATGAGATCTCCATTCCAAGTACCAATTGA</cdnaseq>

Protein Sequence

<aaseq>MYKQTADAVMCILLPDSETAAFRTKGGLLYVDEWNSLQHPVASAFLAAVYSDYMQSSRKTELSCSGQGFSPSDLRKFAKSQADYLLGSNPMKISCLVGYGDRYPERVHHRGTSIPEDVDTGMDLIESYEIPMDCLIPCKFWRNSNMRLLIRRFGVAEMNCETCQLKELELEPREIKDVLRCILHTIFFHRTLSLVRPKDVDCDFFEITYVQCGLPELEKEVDEKINQFVAWVEKHPNRSSQVCLSFFDEKNKLPSWFGNKTERIYWEQWFINLHVISPKRHGKSHSSKALTNIGGQALEESSSRRAALESSIHEVLFQIINFANEKKDHIPPIPDRIFNHEISIPSTN</aaseq>

Gene Sequence

<dnaseqindica>1..76#188..354#501..618#2056..2134#2730..2793#2926..2962#3866..3951#7590..7685#7787..7946#8036..8189#8625..8634#ATGTACAAGCAGACTGCTGATGCCGTCATGTGCATTCTCCTGCCGGATTCAGAGACCGCCGCTTTCAGAACAAAAGGTAAATTCCATGATTCAGAAGCTTAAAAAAAACAATCTCAGGTTCACCATTTGTGTAGCTGGTAATAACAATGCACTAGTAATTCAGATGGCTTGCAAAATTTTATTTCAGGTGGTTTGCTGTACGTTGATGAGTGGAACTCACTCCAGCACCCGGTGGCATCGGCGTTCCTCGCCGCCGTTTACAGCGACTACATGCAGAGCTCCAGGAAGACGGAGCTAAGCTGCAGTGGGCAGGGCTTCTCGCCGAGCGACCTGCGCAAATTCGCCAAGTCCCAGGTAGTAACAAGATTCAGAATTGTCCATGATCCAGAGTTCACAATTGTTCAGACTAACATATGTTCAGAGAGAACATAAATGTTAAGAAATGCAGTACGTAACTTAGATGTGATCACGCACTGATCAGTGATCTTTGTTCTTGGCAGGCGGATTACTTGCTGGGCAGCAACCCGATGAAGATTAGTTGTCTGGTCGGGTACGGCGACCGGTACCCGGAGCGGGTGCACCACCGCGGCACATCTATCCCGGAGGACGTCGACACCGGTGCGACAGCCACAAGTGCAGTGGTGAAGCAGGATTTAGAGATGGGGGTGCCATCTCTAACTCGACATTGTAGCGTTGATGTATGATCGCTAACTCAACATCATACATGTTATAGCGATTAGCTAGAAGAGAGAATGAGAACCCATAGATTATAATTTGCCAATTTAAACAGTTTGTTCCATGATTTTAATTGGAGTCTTGCAATCATTTTTAAAATGATAAATCAGTTAACTAAGTCATTTCATAAGTCCTATATATATAGCTAGGCAGTTATTCTATATAGTTAGTCTCATCTGCAACTAATGATGTAATTAATGGCTAGATTATAAGGGCTAATTATCCTTGGGAGAAGAGAGGGGAGGGGAGGTCACATAGGGGTTAGGGGGTGTTGGCCCTCCCTGGCCCCTACGGTGGCTTCGCCACTGCACAAGTGGCTGGAGACGTCCAAGCCTAACCCAAACGTCACCACCGACGCGCTCGTCGGCGGTATGTACAAGAACAATAGCTTCGTTGACGAGCGCGACAACGTGATGCACAACGAGGCCACCACCTACAACTGTGCCCTCGTCGCCGGCTTGCTCTCCGCCCTCGTCTCCACCTCCTCCCTCGAGCGGCAGCACCGTACTGCAGGCGGCGGTGGCGGCAGTGGCGGTGGCGGTGGCGGTGGCGGTGGCGGTAGGCGACGCCCCACACGGCCACGGCGCCGTCATCGGCAGCCCGCCTCCTCCCGCGTGCTGCCCCTTCTCCCCGCTAGTCGCCTTGTCCCCATCGGCTGCCGGCACCGCCCCTTCTCCCTTCCCCTTGTCCCAGTTGGCCAGCGCGCCGCCCTTCTCCCCGCCAGTCGCCGCCCGTCGCGCCATCCTCCTCGCCGTCAGCTTGCAGAGAAGTGAGAGAGAGAGATGAGGAAGAGAGAGAAGAGGGGAAAGAGGGAGAAGAGGCTGACGTGGACATCTGACATGTGGGACCCACGTGGATCCCACGCTGACTCAGCCGCCACGTAGACCAAAACCAGGGTCAAAACCACCAAAGGATCTTAGGTGACCAGTTTTGCATAGTTAAGGGACCCCGCATATCTGGTTTTGCGGTTCGAGGATGTTTTTTATCCCGATGATAAGTTGAGGGACCTTCGGTGTACTTTTTCCTTGATTTAATAGGGGTGAAAACGTATAAGGGAGTAAAGTAGACTTATTCGTTTGCTGAACAAAAGAGGAACCACCAATGGGCCTATCTGCTAACTTCACTAGGCCCTGGGCCATTCACTGCATCCAGTCTTCCTCTCCAAATCGGTAGCAAGCAACCCACCACGGCACCACCAGCAGAGAGAGGGCTTTTAACTATTTGCCACTCTTAGGCCCTTTGATTCGAAGGAAATTCATAGGATTTTTAGAGGATTTTATTCCTATAGAAATTTTTCCTATATAGCCCTTTGAATCAAAGGAATGGATCTTATAGAATCCTATGAAATTCCTATGGATTGCCTAATACCATGCAAGTTTTGGAGGAATTCTAACATGAGGTAAAACCTCTTGGAAACTTTCATTTGAGTCTTTATCTCTCCTCAATTCCTGTGTTTTTCCTGCGGTCCAATCAAACGACCATTCCTGTGTTTTTCATGTGTTTTGCAATCCTCTGTTTTACCCTTATATTCCTATCAAAATCCCGCGTTTTTCCTATTCCTATGTTTTCTCATTCCTGTGATTCAAAGGGACCCTTACGGATGTTGCTTAACGGTTTGCCACTAGGCCCAGATATCATAGACACATGAGGGCCCACATGTCATTGACAGGGTGTGGTAAATCATTAATTGCCATGTCACAGTAGTGGCAAACAAGTTAAATTTCCCGCAGCAGTCTTCCCCAGTTCTTCTCCTCGATACATCCATTCATCCATCCATTGCCGGCGAGGCGAGACACACACCAACAACTCCGCCGCCGCCGTCGTCAACCTCGCCAGCCCCGGTAAGCCCCAGAATCGAGTCGGTATGATTCGAGTTTCCACGAGCATATGTTCTGCTCCAGCGGGGCCGTAGGCTACCAAAGCCCCGAATATTTCTGCGGGAATCCGACCGGCTTTCTGAGTTTATATATAATTCGTAATTTCATATGGCTTAGGTTATTGATTAGACGCTTCGGGGTCGCGGAGATGAACTGCGAGACCTGTCAGCTGAAGGAGCTGGTCAGATCCAAATTCCACCACTTTTTATTGTTCTTTTCGTTTTCTTTTTTTTCTTTCATGGAATTATTGGTGTGGTTTTTGTGTTTACTTTTTTTTTTTTTTTTTGCTGTGCTGCTTTGTTTTGGGTCGCAGGAACTGGAGCCTCGGGAGATCAAGGATGTGCTACGATGTGAGTCTTCTCTTCCCCTTCTATATCTCCTTACTTTTCTTAAGGAGTGCCCCTTTGTTTCGATCTGCAGTCCCATGAAATCGTTGTTTTGGGTTGAATTGTTTGTGGACTCAAATATTTCTGTAATGTTGAGAATTTCAAATCATAGTTGGGATGTTGAGTATGTTGCATCCGAACACTTCTTCCTATTTGCATAATGGAAAATTATTGGATGAATGATGTATGAGCAAATGAACAAAGAATTGGATATTTAGTTAGTGTTATTGTTAGGTTACCTATTTACCCTTAGTTATTTACTACCTTCTACATTGGGATTTTTTTTTTGTTTTGCAACATATATATACATATTTGTTTACTGTTGGATGGCAGTACCAAGTTCACAGCCTTTTTGCACCTATGGTTTGTCATGAATTTTGCGATAAGGATTTGTGAAACTAGTGTTTATAGTTCTGCACTTCTGCTGTTATACGGTGTAATTAGATTACGCCATGATCTGATTTCATTAGATACTGTTTGATTTCATTAGATCATGCCGTAAAACAGATGATAACCTAGTTCAAATTCCTTTATGCTTTGAGGTTTGAGCGGCATGGAATCCTGTTATAGTGTTATGCTGTTGCTGGCCACCGCATAACTCAATGAACTTCGCTTTTGTTCAGGCTTAATATTCCGTTATCATTGTTCCACCTAAACAAACAAAGTAATCTTCCATTACACGAGCAATACCCATCCCATTTTGATTACATTGTTTTATCGTTGTTTGAACCAAAACACCACATTAATTTCTTTAATAAACTTCGAGTATATTTGTTAAGTAATAAACTGAGAAGTCGAGAGCAGCTTATCCTTCCTAGCATCATCTAATATATGCTGATTGATATGCTGCTTTTGGCTGTGCTGCAGGCATTTTGCACACCATATTCTTCCACAGAACCTTGAGCCTTGTTCGGCCCAAAGATGTTGATTGTGATTTCTTTGAGATTACCTATGTGAGTATTTATCCTGTATAAAGGTCTTGAACTATTTAATGTACTGAATCTATTTGGGTTTTCTATCTAATGTTTGCTGGCACTAAGCACATTTCATGGCTAGCAAATGAAGTATGAAATTTATTACCAACTGCAATTGTCTAGCAAATGAAGTATGAAATTTATTTCCTACTGCAATTGTCTAGTATTTGTAGCAGTGAAATATAGCTTAGCAATTCGAATATCCTATCTGTGCTTTATGTTTGCTGCTGATTTGGTCTTAATTATTGCGATTGTCCACCCTGAACTGTGTAGCCTTGATGTTGTTAACAGTGAGATGTTATCACTTACTCCTATCAGAATAGGAGCTACATGATGTTAAGATATAATTAGATATTTAAGGTCCAGGTGTGACTGACACGTCACTGATGCATAATTAGAGCAAAAGAGCCATGGAAAAGATCAAACCAAAGATAATACAAGATTAATCATAACCATATAATGGTTTATCTTAAATATATATTAGCAATAGTCATGTCTCTTTTATGGATGTAATGCTTTCTATTCTCATTCGCGGTAGCTTCAGATGAGTGTCATGGCACTTGTTTATGCCTTGAGGCACGCAGATAGCTTTTGGCAAGCTGTATTACTTCTTAACCATTATGAGCTTACTGTGTGTATTGATAAACTACTTTTTAGTTAATTGACTGAAGAATTCTGCAAAATCTTTAGGATATAGCCATGTTTTCTATTTTTAGCTTGAATAACCATATAACCAATTCTAATTAGTGACACCTGCTCTATGGTTGCTGATCACCATAAAAATTATATCCAGAGAAGTTCTGAATTGTTGCATTAGACACCTCTCTCATTGTCTCGTTTTATTGTATTGATTTATCTGCATGACCCAACTCTGACCATGAGGTGGTTCAGCCATCCAGAGCACATGCTTTGGTTTATTATGACCTTTACACCATACGACCTAATGACCTAGGCTAAGATAACCCAATGCATATCCTCCATTACATCCACCTTCATGTCAGGCCAAGACTTTGTCTCATGCTTCTGGCCCATTGTGTCATTCAGGCCACTCTATTGACTGATCCACACATGTACTCCCTCCGTTTTTTAATATATGATACTGTTGACTTTTGTTACAACCTTTGACCATTTATTTTATTCAATTTTTTTTGCAAATCTTAAAAATATAAGTAATGCTTAAAGTTCTTTTAGTGATAAATCAAGCCACAAAAAAGAAAAAGACATAAGCTTAAATTTTTTTGAATAAGTCGAACGGTCAAACATGATATAAAAAATCAACAGGATCATATATTAAAAAGAAAAAATGGAGGTAGTATAATGTAGGTACAGGCCAATCCATGCTGTGCCACTCAAAATTACAAATGCCATTAAATGTCATTCACTCCAAAATCTGAAAATTCTCAGCTCAAATTTGCATGGTGCATGTTACAGACTATAGCTTATTATCTGCACCCAACTGGCTTTTTTTCTGACAAAGCCATTACTGGTGTTATATTATACTCTCGCTCCATTCGCAATTGATCATCCCATTACGTTTGTGCAGCGATACCAAGGAAAAATAAATCAAGCATGTAAGCCACAATGCTGAGTGCCAGTTCAGTGGCCCGCGCGCATGGCCAATTAACTTTGCGGGTGGATTTAACTAATCTCGCAATAATCACTCAGCATTAAATTCATGCATCATGCAAGCAATAAAAAAGGAGCGACGGTTTAATTAATCCCCGGATAATCTCTCCGCATTAAATCCATGTGCAGATGCATGAGATAAAAAGAGAAATATGCTGGCTTCCAACGTTGTGCAACAATAAAACCAGAATTTTTCTTTTCAATATGATGATCAACTGCGAATGGAGGGAGTAGGTAGGAAAAACGTACAGAAGCATGAAAAAAAAACAAAAATGTATGTGGTAAATCTTGCAATACTTTTCGCACCCCCTATGCCCTATTGCCAAGCCTCTTGCACTGTGCCATCAGATCGATGATGATTCTCTTCTCTTCAGAAAACCCTTGCACCCATCAATCAGTATCACCGCATGGATTTGAATTCTGCATTCATGGGTAACCTACTAGGAATCTGGTCAGCAACATGTTTCTTGGTCGACTGCTGACCTGATAAAAATGGATTGTCATTATATTTTGTATAATGTATAAGAACATTTAGAGTATCACTAATAATGAAGTGTCTATCCAAAACCTAACTATCCATGTAAAAGATTTCATGCTGCCTTTCACATTTTGGTTTCAGTTTCACTGTGTAACATTTACAAACATTGGTACGAGCTTGTTTTGTTTCTACTTTTAACATAATTGCGAATAGTGATGTTTGGGGCATCCTCCAAGATCTGAATGATTATCTGTTACTGCCTTATGCGTGTCTTATGTGGTCTACAATATGTTTTTGAGAAATATGATAGGAAAGAACCAACTAAGTTAAAAGTGAAGTGTTTAGATTAGATGTTCCTTAAAGGATCATAATCTTATGGCAAATTATGCTACAGGACATTGTGACTTCGTGGTTTTAGCAGTAGGATACCGCACGAAGTGACTTTTGAGGGAAGACACTCTTGAAAGTGGGATATTTGCTGGTGGACAACGGACAACACACCCATTAAAATAATAATTTTCGGTTGAAGAGGAGAGAGAAATCGTGTGAATGACAAAAAATATCCCTGGAACCACATGTCAGCTCTCCAATCTCTCTTCTCTCTATCCCCTCCTTCCACACTTCTTGGTCGGTTGGCGCGAGTCAGGCCGGTGCTGATCTCTTGATCCAGGCCGGCGCTGCCGCCTCCTTCCGCTCCTCTCTGATCGGCGAGCAGACATCGGCAGTGGGCGGCGTTCATTCTTGGTTCATCGCCCAACGCATGTTGATTCTTGCAACACCCGGTTGGCGAGGGATTCTTGCGACTCCCGGCATAGGAGCTCCCCGATGGTTCTTGCTGCGGTAGAGCTCCTGACGGCAGCAGCGGTGTCGTCCCCAGCAGAGCTCCCGGCGGCACAGGTGTCGCCCGCGGGTTCTTGGAACTAGGCGCCCTGTCGTCCACGACAATTCTTGGCACGGCGGAGCTTCGGCGGCAGAGGCGGTGTCAACTCCATGGGTTCTTGGCTTGGCGGAGCTTCGGGCGGTGTAGGTTTCGCTAGCAGGGATGGCTGGCCGGTGCAGACCAGTGGTCGCTGCGACAAGTTCCTGTCTTGGCGGAGGCATGAGAGACAGCGGAGTTCTTTGTGGCAAGAATGGAGGGGAAAGGAGGACAGTTCTTGGTGGCAAGAAGAGAGATGGGATACCTGACATGTGGAAGGGTATTTCAGAACTTTCACGCAATTTCGGTCTCCTATTCAACCAGAAAAGAATATTCTAATGGACGCGGTGTCCATGAGCTAATTTCCACATTTACATAGTGATTTCCCCCAAAAGTCACTTAGTGCGGCGTCCTACAGCTAAAACCGTGAAGTCACGATATTCTATAGCAAAATTTGCCGTAATCTTATTTGGCGTTGAGGGGATCGGATGTCTACTATTGGTCTAACTTGGATAGGCTGTTTTTCATGGATTCACAAATGCTTCGTTATGCTATGAGGTTCCTTAGATTTATTATTGTTGTTGTTGTTTTGTGTAGGTACAATGTGGACTTCCTGAATTAGAAAAGGAAGTTGATGAAAAGATTAACCAGTTTGTTGCGTGGGTAGAGAAACATCCAAATCGGAGCAGTCAGGTTGCATTTCCCATCTCTTTGTTCTGCAATTTTCCACCTTCAATGCTAGACTTGTATTATCTATTCTCCAATTTAATTAGCATATAAGATGAATATGTCAGGTTTGCCTCTCCTTTTTCGATGAGAAAAACAAACTCCCAAGCTGGTTTGGCAACAAAACAGAGCGTATTTATTGGGAACAGTGGTTCATAAATTTGCATGTAATAAGCCCAAAAAGGCATGGCAAATCACATAGCTCTAAAGCACTAACAAATATTGGAGGTAATTTTACTAAAAAACACTTTCATCATCTTTCACAACGATATCCTTAGTTTCACACTATGGTCACATGTGATGCACCATTACCTTAGGGCAAGCATTGGAAGAGAGTAGCTCAAGACGTGCTGCCTTGGAATCATCAATTCATGAAGTACTATTCCAGATCATAAACTTTGCCAATGAGAAAAAGGACCATATTCCTCCAATCCCTGATAGAATATTCAATCATGAGATCTCCATTCCAAGGTATGTCCTATATATGTCTCATGATAAGAACTGTCCATATTGGTCCTTTTTGTTGAGATTCTTTACATATATCTGGATCCCCAGGTGACACGTTTTCCTTGGACGTGTTGACAGCTCCTCGGATTCTATGTTTGGATGGAACACGGATGTTCTTAGGAGAGTGTTGAATAGTGGGCATCCATACTCCCTCTAGCTCAAGATGGCCAATGCTGCCAGTTATCATCACCTTTAATGCTCATAAGGAACAAAGTTTGTGTACATAATCATGTGCGTATTTCATCTGGCTTGTAAATATTTAGGCTAATTTGGTTCTTAGTTTATCAGTGTCGCACGTTCCATAGAGAAACAGGTTCTGAGTATTTTGCAGTAACATCAGATGGTTCATTGTGACGGGATACCGGTTACTGTCAATTGAAATGTGTATCCCTCTTGCAGTACCAATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037316