Os06g0590600

From RiceWiki
Revision as of 09:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0590600| Description = Similar to Beta-1,3-glucanase-like protein| Version = NM_001064503.1 GI:115468737 GeneID:4341414| Length = 1774 bp| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0590600

Description

Similar to Beta-1,3-glucanase-like protein

Version

NM_001064503.1 GI:115468737 GeneID:4341414

Length

1774 bp

Definition

Oryza sativa Japonica Group Os06g0590600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:24064197..24065970

Sequence Coding Region

24064352..24065450,24065542..24065894

Expression

GEO Profiles:Os06g0590600

Genome Context

<gbrowseImage1> name=NC_008399:24064197..24065970 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:24064197..24065970 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctccgcctccgcggctgccggccggcgcggccgcgctgctgctgctgctcgccgtggcgtcccgtgcggcggcggacggcaacgccgtggacgtcggcgtgaactggggctcgcagctgtcgcacccgctgctgcccaagtcggtcgtgcagatgctcaaggagaacggcatcctgaaggtgaagctgttcgacgccgacccgtggcccgtcggcgcgctcgtcgactccggcatcgaggtcatgctcggcatccccaacgacatgctggagacgatgaacagctacgggaacgcccaggattgggtcaaggagaacgtcaccagctacggcgacaagctcaagatcaagtatgtcgccgtggggaacgagccgtttctcaaggcgtacaacggatcgttcatgaagacgaccttcccggcgctgaagaacatccagaaggcgctgaacgaggccggcgtcggcgacaaggtgaaggcgaccgtcccgctgaacgccgacgtgtacgtctcgccggacaacaagccgtcctccggcgcgttccggccggacatccagggcctgatgacggacatggtgaagttcctgcacgagcacggctcgcccttcgtcgtcaacatctaccccttcctcagcctgtaccagagcgacgacttcccgttcgagttcgccttcgtcgacggcggcaagaccatccaggacaagggcggcatcagctactccaacgtgttcgacgccaactacgacacgctggtcaccgcgctgaagaaggccggcgtcccaagcctaaaggtcgtcgtcggcgaggtcggctggccgaccgacggcgacaagaacgccaacctcaagctcgcgcggcgctactacgacggcctcctgaagaagctctccaagaaggaaggcacgccgctccggcctggcaagatggacgtctacatgttcggcctcttcgacgaggacatgaagagcattctcccgggcaacttcgagcgccattggggcatcttcacctacgacggcaagcccaagttcccgatggacctctccggccacggcaacgacaagccgctcgccggcgtgcccggcgtcgagtacctcccgaagcagtggtgcgtgttcgacgacggggccgaggacaagtccaagctccccgggaacatccagtacgcgtgcgccagcggcgactgcacggcgctcggctacgggtgctcctgcaacggcctcgacgagaagagcaacatctcctacgccttcaacatgtacttccagatgcaggaccaggacgtgcgcgcctgcgacttcgacggcctcgccaagatcaccaccaagaacgcctccgcgcgcggctgcgcgttcccgatccagatcatcagcgccgccgcgccggccgtcgccggcgtcggcttatccgcggcggcgttgctggcattgttgatggtgctggtgtga</cdnaseq>

Protein Sequence

<aaseq>MAPPPRLPAGAAALLLLLAVASRAAADGNAVDVGVNWGSQLSHP LLPKSVVQMLKENGILKVKLFDADPWPVGALVDSGIEVMLGIPNDMLETMNSYGNAQD WVKENVTSYGDKLKIKYVAVGNEPFLKAYNGSFMKTTFPALKNIQKALNEAGVGDKVK ATVPLNADVYVSPDNKPSSGAFRPDIQGLMTDMVKFLHEHGSPFVVNIYPFLSLYQSD DFPFEFAFVDGGKTIQDKGGISYSNVFDANYDTLVTALKKAGVPSLKVVVGEVGWPTD GDKNANLKLARRYYDGLLKKLSKKEGTPLRPGKMDVYMFGLFDEDMKSILPGNFERHW GIFTYDGKPKFPMDLSGHGNDKPLAGVPGVEYLPKQWCVFDDGAEDKSKLPGNIQYAC ASGDCTALGYGCSCNGLDEKSNISYAFNMYFQMQDQDVRACDFDGLAKITTKNASARG CAFPIQIISAAAPAVAGVGLSAAALLALLMVLV</aaseq>

Gene Sequence

<dnaseqindica>521..1619#77..429#tctctcacctagctgccatcgatccgaaacacagggggcggggagatcgatcagagctgagacggcaaaccccggcatggctccgcctccgcggctgccggccggcgcggccgcgctgctgctgctgctcgccgtggcgtcccgtgcggcggcggacggcaacgccgtggacgtcggcgtgaactggggctcgcagctgtcgcacccgctgctgcccaagtcggtcgtgcagatgctcaaggagaacggcatcctgaaggtgaagctgttcgacgccgacccgtggcccgtcggcgcgctcgtcgactccggcatcgaggtcatgctcggcatccccaacgacatgctggagacgatgaacagctacgggaacgcccaggattgggtcaaggagaacgtcaccagctacggcgacaagctcaagatcaagtaggggcatatgccggccgctcgccaaggtgttcgtccatggccgcaatccccgcgatgatcctaatcgtgagtctgatcgatcgagcaggtatgtcgccgtggggaacgagccgtttctcaaggcgtacaacggatcgttcatgaagacgaccttcccggcgctgaagaacatccagaaggcgctgaacgaggccggcgtcggcgacaaggtgaaggcgaccgtcccgctgaacgccgacgtgtacgtctcgccggacaacaagccgtcctccggcgcgttccggccggacatccagggcctgatgacggacatggtgaagttcctgcacgagcacggctcgcccttcgtcgtcaacatctaccccttcctcagcctgtaccagagcgacgacttcccgttcgagttcgccttcgtcgacggcggcaagaccatccaggacaagggcggcatcagctactccaacgtgttcgacgccaactacgacacgctggtcaccgcgctgaagaaggccggcgtcccaagcctaaaggtcgtcgtcggcgaggtcggctggccgaccgacggcgacaagaacgccaacctcaagctcgcgcggcgctactacgacggcctcctgaagaagctctccaagaaggaaggcacgccgctccggcctggcaagatggacgtctacatgttcggcctcttcgacgaggacatgaagagcattctcccgggcaacttcgagcgccattggggcatcttcacctacgacggcaagcccaagttcccgatggacctctccggccacggcaacgacaagccgctcgccggcgtgcccggcgtcgagtacctcccgaagcagtggtgcgtgttcgacgacggggccgaggacaagtccaagctccccgggaacatccagtacgcgtgcgccagcggcgactgcacggcgctcggctacgggtgctcctgcaacggcctcgacgagaagagcaacatctcctacgccttcaacatgtacttccagatgcaggaccaggacgtgcgcgcctgcgacttcgacggcctcgccaagatcaccaccaagaacgcctccgcgcgcggctgcgcgttcccgatccagatcatcagcgccgccgcgccggccgtcgccggcgtcggcttatccgcggcggcgttgctggcattgttgatggtgctggtgtgagcataccgtgtgagacgggtgggtgggtgcgtgcgtggcgtacatgtagtgagagtgggtctatgcgtgaattgaattgtccatttttcgcagcgttcaaatgtgttgtgacatttgcaaattcttcacgccggatgcatccttaattttctctt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0590600, RefSeq:Os06g0590600