Os06g0595900

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Revision as of 09:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0595900| Description = The start codon is not identified.| Version = NM_001064519.1 GI:115468769 GeneID:4341430| Length = 5728 bp| Definit...")
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Gene Name

Os06g0595900

Description

The start codon is not identified.

Version

NM_001064519.1 GI:115468769 GeneID:4341430

Length

5728 bp

Definition

Oryza sativa Japonica Group Os06g0595900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:24320729..24326456

Sequence Coding Region

24320729..24321144,24321247..24321306,24323818..24323938,24324131..24325394,24325474..24325501

Expression

GEO Profiles:Os06g0595900

Genome Context

<gbrowseImage1> name=NC_008399:24320729..24326456 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:24320729..24326456 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>caattcggcatcaaacatgtcgatcaagatgagcttctgcaaggccatggactttgctggtcttctgacgttgttggagcttctgaaactatttctcaatccgatccagacagagtcagaaaatctgatattgatgaaggtgttgatgtatctctgattgagcatgagtctaaaagaataaagactgatgatggggcagcagaagaaaagaagagtgtaacccaaaaggcccaaattttagcatttgaaattgaaggtgagctgttcactttattgggaggagttaacaagaaatacaaggagaagggtcgatcacttctgttcaacttaaaagataaaagtaatcctgtactgaggggacgtgtcttgtctggagatataacacccaaacgcctatgttcaatgactactgaagaactcgcttcaaaggaactttcagactggcggttggctaaggctgaagagcttgcaaagatggtggttcttcctagtaaagaagtggatgttagacgcttggtgaggaaaacacacaaaggagaatttcaagttgaggtggaagaaactgacggtatctctgtggaggttggaattgggggtgatttgctttcgcatgttccatcaagacctactgaaggtcaaaccaaaaccgatgataaaagtgtacacacggaagaaaaagaatcagacaatagtgagcaagatggagttatcgtgacaggcggcaataacatgccaagcaatttagaacatacagaaaatgagaaaactgatctgatgcaggaactgatggtagatgacctgaaagatacagagaatcttccaccaattatgtcactggacgaattcatggagacccttgattctgaaccacctttcgaagatgattccactcaaactgtgaaagatgatcctaattctattgagaaaactgacatttcattgaaatcggaagattcttccaaaaatgtggatagtgcttctgcatcagattctcaacttgatccgcaaacattatctcctcaagataagtttgagtccaagttacagtcacccaaaaaagacgcaggctcaattttgtttccagttgaacaaataaaggaagatctgttagtcaaatcctcccctgaaaaggccaatgctgaaaacattgatactggcagtcagtcgatccctgaatctatcacggattgtaaatcagctcctgatgctttgctgacacatgacagtgtatgggagggaacaattcaactttccttgtcatcactcacaaatgttgttgcgatcttcaaaagcggtgaaaagacatccacaaacgagtggcgccatttccttgatatcaagggaagagtcaggctcagtgcttttcaagaatttcttgaacaacttcctaaatccaggagccgtgctataatggtaactgagttgcgttggaaggagggctctcttgagagtgggcgccagcatctcttgcggaccattgactcatatattgcagacgagagagtaggactagtgaagcctgcagatggagtggagctttacctctgcccttctcaagggaaggcagcacagatacttgcagagcacctacccaaggagcagtcgagcagcttaaccgtgacaggaacatcagctattggagtcgtcgtgtggcggaggccccatgtttcacctaggatacccgccaggaacgatggctccagaaaccaatccatctcgaggaagcagcatgccgtgattgccagtgcagtgcccttgtcttccaagcctaccaatgagcgtcagcaccacggtcaggatgttgtaactgatgatgttcctccgggctttggccctggtgttgttagggaagacgatgacctacctgaatacgattttgttaccgtccc</cdnaseq>

Protein Sequence

<aaseq>QFGIKHVDQDELLQGHGLCWSSDVVGASETISQSDPDRVRKSDI DEGVDVSLIEHESKRIKTDDGAAEEKKSVTQKAQILAFEIEGELFTLLGGVNKKYKEK GRSLLFNLKDKSNPVLRGRVLSGDITPKRLCSMTTEELASKELSDWRLAKAEELAKMV VLPSKEVDVRRLVRKTHKGEFQVEVEETDGISVEVGIGGDLLSHVPSRPTEGQTKTDD KSVHTEEKESDNSEQDGVIVTGGNNMPSNLEHTENEKTDLMQELMVDDLKDTENLPPI MSLDEFMETLDSEPPFEDDSTQTVKDDPNSIEKTDISLKSEDSSKNVDSASASDSQLD PQTLSPQDKFESKLQSPKKDAGSILFPVEQIKEDLLVKSSPEKANAENIDTGSQSIPE SITDCKSAPDALLTHDSVWEGTIQLSLSSLTNVVAIFKSGEKTSTNEWRHFLDIKGRV RLSAFQEFLEQLPKSRSRAIMVTELRWKEGSLESGRQHLLRTIDSYIADERVGLVKPA DGVELYLCPSQGKAAQILAEHLPKEQSSSLTVTGTSAIGVVVWRRPHVSPRIPARNDG SRNQSISRKQHAVIASAVPLSSKPTNERQHHGQDVVTDDVPPGFGPGVVREDDDLPEY DFVTVP</aaseq>

Gene Sequence

<dnaseqindica>5313..5728#5151..5210#2519..2639#1063..2326#956..983#atcgagccgcaacaaaagcggaaataaatcccccacaaaccctacccttctctcccctccactcccccacctccgcgcctctctccgccgtgttcctcccgcccgccgccgccttcccgccggacctagctcctcccccgccgtcctcgacctcaccggaggtgagcccccctcccccccgggaacccgcattgcggtttgacgtcgagtaggtagggttttatctgcgtgcgaacgtgtgctgatgtaaccctagttttggatccccctaggtggcgtggtgcgggaacgggcagggcgccgtgatggagatccccaagcaggggcagccgccgcgggtggcggggacgccgccgacattgcctggggcgattacccacactacgcaggttgggtacccggccgtgttctacaatggcaactggggcgcgcaggtgccggccagcagctacctgatcgtgcccatgagcgagccgccggcgcaggttggtgtgcccaggcccaacgcgctgggcctctccgggtccggggccaggccgttgagtagggtgtcgcttaggccgccgcaacaggtgctgagtgtccagacagctttgcctggtatggccgcgatgatgccatcgccgtctatgatagcaggtaagaagatggcagcgtcgccgaaggttcagatgctgaagtctgtgccctttcggtctgctggtagcaagcgtcctgcgcaggaactgctgcccaaggcacagccgcaattatttgagtccgtgagatcaaagttcagagagactctggctgctgccctgaatatggattctgaccaacagtgtgccccgcaatccgttgaaaccgtgtcacatgttggatctgctagcgagaacaagcaagccgatggtgctggtattgattctgtcacagagactagtgctttgaaaagcgggcaacataacatgttaagtagcaattcggcatcaaacatgtcgatcaaggtgagtgatgatatgcagcagcaatcaatacatgttcctttggaaaataaagtactggataacaattcttgcactttagatgagcttctgcaaggccatggactttgctggtcttctgacgttgttggagcttctgaaactatttctcaatccgatccagacagagtcagaaaatctgatattgatgaaggtgttgatgtatctctgattgagcatgagtctaaaagaataaagactgatgatggggcagcagaagaaaagaagagtgtaacccaaaaggcccaaattttagcatttgaaattgaaggtgagctgttcactttattgggaggagttaacaagaaatacaaggagaagggtcgatcacttctgttcaacttaaaagataaaagtaatcctgtactgaggggacgtgtcttgtctggagatataacacccaaacgcctatgttcaatgactactgaagaactcgcttcaaaggaactttcagactggcggttggctaaggctgaagagcttgcaaagatggtggttcttcctagtaaagaagtggatgttagacgcttggtgaggaaaacacacaaaggagaatttcaagttgaggtggaagaaactgacggtatctctgtggaggttggaattgggggtgatttgctttcgcatgttccatcaagacctactgaaggtcaaaccaaaaccgatgataaaagtgtacacacggaagaaaaagaatcagacaatagtgagcaagatggagttatcgtgacaggcggcaataacatgccaagcaatttagaacatacagaaaatgagaaaactgatctgatgcaggaactgatggtagatgacctgaaagatacagagaatcttccaccaattatgtcactggacgaattcatggagacccttgattctgaaccacctttcgaagatgattccactcaaactgtgaaagatgatcctaattctattgagaaaactgacatttcattgaaatcggaagattcttccaaaaatgtggatagtgcttctgcatcagattctcaacttgatccgcaaacattatctcctcaagataagtttgagtccaagttacagtcacccaaaaaagacgcaggctcaattttgtttccagttgaacaaataaaggaagatctgttagtcaaatcctcccctgaaaaggccaatgctgaaaacattgatactggcagtcagtcgatccctgaatctatcacggattgtaaatcagctcctgatgctttgctgacacatgacagtgtatgggagggaacaattcaactttccttgtcatcactcacaaatgttgttgcgatcttcaaaaggtttgtttcatccgcagttctgcactgcttatctctcttgtatatacaattcactattgaaagtacttctcttgctagtttctatatcttgagcacaatacatggtaccattttatagaacagtgcacaacttgacaaattaatatttcagttatatatcctcagtcgattattgttttgtctgttctgtagcggtgaaaagacatccacaaacgagtggcgccatttccttgatatcaagggaagagtcaggctcagtgcttttcaagaatttcttgaacaacttcctaaatccaggagccgtgctataatggtaatagttatttctcatttgctattctcagttggatgactatattttttaattaaaattggcaattaccacagtatggaaatgtgaaatacatcgatgttgtacagttgtacctattgacttgctagcagtagcatctactgcttcttctgaatgattgattgtaagatgctacggaaacacatttttgttttgtaagataatctttgttgttaacgttaggcatttgcataaatattccgaactccgtgttcaggggattccataaatctaatgatggtagccattcccttaaaagaaatactgggtcaacatgacatgctgtggcaattcctttcctttttttttttttgcagagtgttattcaatgtcactgttttctggttgtgttttaattgagttctacacattgcattgaagtgcactgcagatatagtgctataccttcagtggaatggactgtcgcctctgttgtccttacagcaaattgattccttatgggactcggtacacaaacctagcaaaaacaagttgcgcacatggatttgcctatgcaaattgccctcgcagatcaacagaagaaagccacgaaaataactagtatcctgagaaagggcctgttttgagtgcttaataaaagttaatatacataatatacatctgctaacgagatatttctttttttaccactgaacgaacctccattctatttctttgtgctccaaaatgacactgtgtttctgtattaaccctttttgcactcccagtttgactcttttcgaacacataaaaaataccacaaaatcaagggaaaaaaatcagaatacacttaaaaaaaaagctctgttcaaagagggttcaatactatgttaggaactgggtagttcatgtggaatatgttgaaactgtggttccaaatacagtgtaaaacaccttatactgttatacatgcaattaggctttagatattatgcgagtgaatttgagaaaacctcatgtttgtggccccttctgacacaaaatcgcagatagatgggtgatagttacagaaaaccccatagtcgaatatagcattgtgatgtggacattcggcccaaccgtggcctttttgctgtagggtatgttcctgaaaaagttggaagtttgaagaaagttgggagtttggaaaaaaagttgaaagtttatgtgtgtaggaaagtttttgatgtgatatgatgtaatggaaagttgggaataggggggaaactaaacacggctgtagtgtggcactacatccatcttgtgtgggtccttggtgtaaatctagaaccacgttcgcatgtcagcctgtcaggatggacagctgttgggctacgcagttaggcaaccgccataacacaaccttctgtcctgatacgtgagccattcaaatatggcttaagaattccataaaggcccacactagaccagtgttctagaaaaaaggtctacaaggccacattccagaaaaagggtctacaaggccaagccactggatacatggaacgggtgccccaaccttgcactggacacatgttgtgccctgttggcaaacctaacatcataccacaatgaatttttcggtctggattgcaacaactctgggtttcatttactagcttcaattgacgtgtgttatgtgaaaatatttttaaaacgcgtggttttgtggtacacagggttgtatttgtacctggagttttatgcaatttattactcgtattggtccactaggccactaggtattaatgtttttgaaatgggttgcatagttgcactaatgttatgttgaggcatggacctttgccaatgttttacactttaagtgttagttggagaaacaaataaatgaaagaaaaaaagggaatgccctaataagaagactatgaccgtattatagcctgaatgttggattgtgctatggttcccgcactgattcatgaatgatagaaatattatgtacttcggaattgcatatgtacttttgtgctcttgaatttgattattcactatgcttagtatatactccctccgtttcatattataagactttctagcattgcccacattcatatagatgttaatgaatctaaatacatatatatgtctagaactctagattcattagtatatatatgaatgtgggcaatgctagaaagtcttataatatgaaacggaggaagtagttccacattccacgctatgagaaatccacaattttcatttgaacctgcttttcttttgcttagagcctagcaattagcacatacaaggtcttgttcttaaagttcctgactgcaccccaagtatttcatatacctgattagcccaaataaataggttatgttcatgcattaaatgttgatttgtgcatatagagatgctatctgatggaaaatgatttaccttgtgccatccagatgggtaatcttccattatttctgctcctgaaacatatgttatttcattaagaacctgttactcgttttacaggtaactgagttgcgttggaaggagggctctcttgagagtgggcgccagcatctcttgcgggttactcccttaattcttgtcatctgttaccttttgcacgggctcagcgtaatgctattgtgggactcctgatctgctaaccacctctaatttttcctgcagaccattgactcatatattgcagacgagagagtaggactagtgaagcctgcagatggagtggagctttacctctgcccttctcaagggaaggcagcacagatacttgcagagcacctacccaaggagcagtcgagcagcttaaccgtgacaggaacatcagctattggagtcgtcgtgtggcggaggccccatgtttcacctaggatacccgccaggaacgatggctccagaaaccaatccatctcgaggaagcagcatgccgtgattgccagtgcagtgcccttgtcttccaagcctaccaatgagcgtcagcaccacggtcaggatgttgtaactgatgatgttcctccgggctttggccctggtgttgttagggaagacgatgacctacctgaatacgattttgttaccgtccc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0595900, RefSeq:Os06g0595900