Os06g0597900

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Revision as of 09:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0597900| Description = SOUL heme-binding protein family protein| Version = NM_001064527.1 GI:115468785 GeneID:4341438| Length = 3321 bp| D...")
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Gene Name

Os06g0597900

Description

SOUL heme-binding protein family protein

Version

NM_001064527.1 GI:115468785 GeneID:4341438

Length

3321 bp

Definition

Oryza sativa Japonica Group Os06g0597900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:24436711..24440031

Sequence Coding Region

24436730..24437125,24437228..24437365,24438161..24438229,24438307..24438378,24438628..24438710
,24438790..24438921,24439062..24439272,24439541..24439585

Expression

GEO Profiles:Os06g0597900

Genome Context

<gbrowseImage1> name=NC_008399:24436711..24440031 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:24436711..24440031 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccacatccctcctctcccgcctcctcatcctcccaccaccggcgccggccgccgccgcctctctccggcagcggaaacccgccgcagcgcactccctatcctccagggggcggaggccccgcctcgcggtacaggcggtagcccccgcggcggcggaggaggagaagggcgggctgccggcggcggaggcggagaggctggcggagttcctgcgggaggacctcccccacctgttcgacgacgtcggcgtcgaccgctcggcgtacgacgaccgcgtccgcttccgcgaccccatcacccgccacgacaccatcgacggctacctcctcaacatccgcctcctcaagctcctcttccgtcccgacttctacctccaccacgtcgagcagacagggccgtacgagatcaccacgaggtggaccatggtgatgaagttcgttctactgccgtggaagccggagctggtcttcactggcctctcgatcatgggcgtcaaccctcagaatctcaagttctgtagccacgtggatatttgggactcaatacagaataatgaatatttttcttttgaaggactgggggatgtcttcaagcagctacggatttacaagacccctgatatagaaacaccaaagtaccttatcctgaaaaggacggcaaactatgagattaggagttatccaccattcttaatagttgaagcaaaaggagataaactaaccggatcatcaggttttaataatgtaactgggtatatttttggcaagaatgcttcttcagaaacgattgcaatgactacacctgtcttcactcaggcttctgatgacaaactctcagatgtatccatccagatagttttgccgatgaacaaagacttggacagcttaccagctccaaacacggaagctgtcaacttgcgaaaggtagaaggtggcattgctgcagtgaaaaaattcagtgggagaccaaaagaggaaattgtgatccagaaagaaaaggagctgcgctcccaattactcaaagatgtgttgaagcctcaacatggttgtttgcttgcacgctacaatgatcctagaacacagagctttataatgaggaatgaggtgctgatatggttaaacgacttcacgctggagtag</cdnaseq>

Protein Sequence

<aaseq>MAATSLLSRLLILPPPAPAAAASLRQRKPAAAHSLSSRGRRPRL AVQAVAPAAAEEEKGGLPAAEAERLAEFLREDLPHLFDDVGVDRSAYDDRVRFRDPIT RHDTIDGYLLNIRLLKLLFRPDFYLHHVEQTGPYEITTRWTMVMKFVLLPWKPELVFT GLSIMGVNPQNLKFCSHVDIWDSIQNNEYFSFEGLGDVFKQLRIYKTPDIETPKYLIL KRTANYEIRSYPPFLIVEAKGDKLTGSSGFNNVTGYIFGKNASSETIAMTTPVFTQAS DDKLSDVSIQIVLPMNKDLDSLPAPNTEAVNLRKVEGGIAAVKKFSGRPKEEIVIQKE KELRSQLLKDVLKPQHGCLLARYNDPRTQSFIMRNEVLIWLNDFTLE</aaseq>

Gene Sequence

<dnaseqindica>20..415#518..655#1451..1519#1597..1668#1918..2000#2080..2211#2352..2562#2831..2875#gagagaacaaacggcatcaatggcggccacatccctcctctcccgcctcctcatcctcccaccaccggcgccggccgccgccgcctctctccggcagcggaaacccgccgcagcgcactccctatcctccagggggcggaggccccgcctcgcggtacaggcggtagcccccgcggcggcggaggaggagaagggcgggctgccggcggcggaggcggagaggctggcggagttcctgcgggaggacctcccccacctgttcgacgacgtcggcgtcgaccgctcggcgtacgacgaccgcgtccgcttccgcgaccccatcacccgccacgacaccatcgacggctacctcctcaacatccgcctcctcaagctcctcttccgtcccgacttctacctccaccacgtcgagcaggttgagctgctaccccgcactgcatttcccaatttcaatcgtaacagatttgcagcgcattttgcgaagaactcgtgactggatgggtggtggggtttttagacagggccgtacgagatcaccacgaggtggaccatggtgatgaagttcgttctactgccgtggaagccggagctggtcttcactggcctctcgatcatgggcgtcaaccctcagaatctcaagttctgtagccacgtggttagcattcttgcttgacactgcagcttttggaacatttgtttcttcgaattaatgtacgttaagattttcttttattgttcatgaaatgaattagtggtattttaatcccctgaatcatatgtatggatcacgtcttacagagtctactatatgttagaaccataggtctcctgcttgcgacattcgagacctctgagatgaagcatatatattaagcatatgcagcttagaagttaaagtcttaaaagagtacggtttcttttatcaagagcattagtaagcagtcagtctggagtaagatttcgagagatgagatcagggagttcctgacaaagctttcagacaagctttagttgcatacttatgtttagctatgtcaaataactttttattgttgcaattctccaccggatacagttcctcctataatgcaatgcttcatagtcctaattcaatttgatactaaattttagcttttcaggaagcttgtgggactatttattgatgggccggcaaaacaatacttagcttccatagtccacacttgataaagtttacaatactcttaataattgcacttgctgtgatgtgccgtagagttcctggttcttacttatttgtttttttccccccgtttagtgtgcatttttgtaaatagaagattaaggatactatgcttcccagcagagtgttggagagattttgtacatacagagaactccaacacactaaataagtttacccaagtaatcattaaatattattataacttcccaatatgctgaagtgcaggatatttgggactcaatacagaataatgaatatttttcttttgaaggactgggggatgtcttcaagcaggtcatttgtcatgactctacatttttcttataatttgtcaaacaaatgtttgagctagatcttttgattctgcacagctacggatttacaagacccctgatatagaaacaccaaagtaccttatcctgaaaaggacggcaaactatgaggtattaactttaggaattcattttatatctgttctgaagtaacagcactgccatattctcatgatccatgcttcatatgaattaaccatactgataagtatccgaattattttacttgatttttgccagtgtataatctttgctaatgtgatctctatagtagtcagaactcagaacatctaatttatagctgttacttctctgcagaatgtttaagatgaaatcatgaacataaattcttttttgcagattaggagttatccaccattcttaatagttgaagcaaaaggagataaactaaccggatcatcaggttttaataatgtaactgggtgagttatttttctgttacagtagatatttaaccctgtaatcctagtactgattacttataagcgcttgtaaatgtaggtatatttttggcaagaatgcttcttcagaaacgattgcaatgactacacctgtcttcactcaggcttctgatgacaaactctcagatgtatccatccagatagttttgccgatgaacaaagacttggacaggtctatcttgtgcaatgcaggatttcagttactgacagtgcggtttaaagcattgattttggacagctgtgcaaaattaaactaaaagtagtcttatggatttatttctattactaatagtagtaatcttgttcaatcagcttaccagctccaaacacggaagctgtcaacttgcgaaaggtagaaggtggcattgctgcagtgaaaaaattcagtgggagaccaaaagaggaaattgtgatccagaaagaaaaggagctgcgctcccaattactcaaagatgtgttgaagcctcaacatggttgtttgcttgcacgctacaatgatcctagaacacagagctttataatggtatgtttccttttgggctgtcccttattgtttaagctgacatgtgatttttttgatgtacttcactataatgatcctaagactaactaatgaggtttattttatgattaagtgttggaaagttgatattttatcatcatgcttcctttcccaaaattccagttcattcttttttcagttttacatttccagttcctttttttcagttttacattcattgttatcttttttaattcggaaactctcttatgttcttccttatcaaaagaggaatgaggtgctgatatggttaaacgacttcacgctggagtagtagtcttcactgtctacaacacatttctgcaacatatagacacttagcattggagctttcggagcatcatagcaaggtaaagtaattgttcataaagcattttgcgtggtttggtagtattttaaagctgcatgttatttcctctaaaaaagctttgtattctacatgtaaaaaaaatgtagaaacaatttatgtatctaaatgtatcgtgcaacttagttattcccatagatccgtcatgccttttgtcatccatgttttaattttttgcattatgctcacttagcttttgcattatgcaggtgaaaaaaattaggaagatgcatggatgaaatgataggagaatgtaaataccgaaaaggtcactatattacatggtaattctagtccatatgaaaaatgtttgtgtataacaaaagtgaaatgaacaaaatgaaactgtttag</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0597900, RefSeq:Os06g0597900