Os06g0598800

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Revision as of 09:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0598800| Description = Similar to Fatty acid elongase 1-like protein| Version = NM_001064531.1 GI:115468793 GeneID:4341445| Length = 2359 b...")
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Gene Name

Os06g0598800

Description

Similar to Fatty acid elongase 1-like protein

Version

NM_001064531.1 GI:115468793 GeneID:4341445

Length

2359 bp

Definition

Oryza sativa Japonica Group Os06g0598800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:24485741..24488099

Sequence Coding Region

24486169..24487728

Expression

GEO Profiles:Os06g0598800

Genome Context

<gbrowseImage1> name=NC_008399:24485741..24488099 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:24485741..24488099 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagacctcggcggcggcggcgcccaatggcggcgcggcggcggcggagcagcagcagcggcgtcggctgccggacttccagcagtcggtgaggctcaagtacgtgaagctggggtaccactacctcatctcccacggcatgtacctgctgctgtcgccgctgatggcgctggtggccgtgcagctctccaccgtgtccccgggcgacatcgccgacctgtgggagcagctccgcttcaacctcctctccgtcgtcgcctgctccaccctcctcgtcttcctctccaccctctacttcctcacccgcccccgccccgtctacctcctcgacttcgcctgctacaagcccgacccccagcgcaagtgcacccgcgagaccttcatgcgctgctccagcctcaccggctccttcaccgacgccaacctcgacttccagcgcaagatcctcgagcgctccggcctcggcgaggacacctacctccctcccgccgtgctgcgcgtcccgcccaacccgtgcatggacgaggcccgcaaggaggcccgcaccgtcatgttcggcgccattgaccagcttcttgagaagacgggtgtgaagcccaaggacattggtgtggttgtcgtcaattgcagcttgttcaacccgacgccgtcgctgtccgccatggttgtgaaccactacaagctgagggggaatgtcatcagctacaacctcggcgggatggggtgcagtgccggcttgctgtccgtcgatctcgccaaggacttgctgcaggtgcacccaaactcgtacgcgctggtggtcagcatggagaacatcacgctcaattggtactttggcaacaaccggtcgatgctcgtgtcgaattgcctgttccggatgggcggcgccgccatcctgctgtcgaacaggcggtccgaccgccggaggtccaagtatgagcttgtgcacaccgtgcgcacgcacaagggcgccaacgacaagtgctttggctgtgtcacccaggaggaagacgagatcggcaagatcggcgtgtcgctctccaaggacctgatggcggtggccggagacgcgctgaagacgaacatcaccaccctcgggccgctcgtgctcccgttgtcggagcagctgctcttcatggccacattggttgccaagaaggtcctcaagatgaagatcaagccatacattcccgatttcaagctggcatttgagcatttctgcatccatgccggtggccgtgccgtgctggatgagctggagaagaacttggagttgactgactggcacatggagccatctaggatgacactgtaccggtttggcaacacatcgagcagctcactctggtatgagctggcgtacaccgaggcgaaggggaggatcaggaagcgggacaggatctggcagattgcatttggatctggtttcaagtgcaacagcgcagtctggaaggcgctgcaaacagtgaatccagcgaaggagaagaacccctggatggatgagattgacaacttcccggttgaagttccaaagatatcaaaggttggaaatgcatga</cdnaseq>

Protein Sequence

<aaseq>METSAAAAPNGGAAAAEQQQRRRLPDFQQSVRLKYVKLGYHYLI SHGMYLLLSPLMALVAVQLSTVSPGDIADLWEQLRFNLLSVVACSTLLVFLSTLYFLT RPRPVYLLDFACYKPDPQRKCTRETFMRCSSLTGSFTDANLDFQRKILERSGLGEDTY LPPAVLRVPPNPCMDEARKEARTVMFGAIDQLLEKTGVKPKDIGVVVVNCSLFNPTPS LSAMVVNHYKLRGNVISYNLGGMGCSAGLLSVDLAKDLLQVHPNSYALVVSMENITLN WYFGNNRSMLVSNCLFRMGGAAILLSNRRSDRRRSKYELVHTVRTHKGANDKCFGCVT QEEDEIGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPLSEQLLFMATLVAKKVLKMK IKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELTDWHMEPSRMTLYRFGNTSSSSLW YELAYTEAKGRIRKRDRIWQIAFGSGFKCNSAVWKALQTVNPAKEKNPWMDEIDNFPV EVPKISKVGNA</aaseq>

Gene Sequence

<dnaseqindica>429..1988#agtttccaccttttccctctcttcctccgcttattaaaaggcggcgtccctccccgtggtgctcgccgccgtattcaagcggaggaagagagagagagagagagaatcaaggcagtagtcgtcttcctctcctctcgccgccgcatccgaccggagaaagatcccttctttccctcctccaagcccgcctcggtatgtatgtactcgctttgcctcaaaaaaatcccccccttttctccgcccccgcattgcggccgcctggaccttctcttcgattcgcaaatctggtttcttttcgcgatttcgcatctcatctcaattcctagaccctcggagatctcgccatttcgcttctcgcggcgcaaatctgcgatcttttttaaacctcttgtttcttgtttttttcttgttttttgcatcagccagagatggagacctcggcggcggcggcgcccaatggcggcgcggcggcggcggagcagcagcagcggcgtcggctgccggacttccagcagtcggtgaggctcaagtacgtgaagctggggtaccactacctcatctcccacggcatgtacctgctgctgtcgccgctgatggcgctggtggccgtgcagctctccaccgtgtccccgggcgacatcgccgacctgtgggagcagctccgcttcaacctcctctccgtcgtcgcctgctccaccctcctcgtcttcctctccaccctctacttcctcacccgcccccgccccgtctacctcctcgacttcgcctgctacaagcccgacccccagcgcaagtgcacccgcgagaccttcatgcgctgctccagcctcaccggctccttcaccgacgccaacctcgacttccagcgcaagatcctcgagcgctccggcctcggcgaggacacctacctccctcccgccgtgctgcgcgtcccgcccaacccgtgcatggacgaggcccgcaaggaggcccgcaccgtcatgttcggcgccattgaccagcttcttgagaagacgggtgtgaagcccaaggacattggtgtggttgtcgtcaattgcagcttgttcaacccgacgccgtcgctgtccgccatggttgtgaaccactacaagctgagggggaatgtcatcagctacaacctcggcgggatggggtgcagtgccggcttgctgtccgtcgatctcgccaaggacttgctgcaggtgcacccaaactcgtacgcgctggtggtcagcatggagaacatcacgctcaattggtactttggcaacaaccggtcgatgctcgtgtcgaattgcctgttccggatgggcggcgccgccatcctgctgtcgaacaggcggtccgaccgccggaggtccaagtatgagcttgtgcacaccgtgcgcacgcacaagggcgccaacgacaagtgctttggctgtgtcacccaggaggaagacgagatcggcaagatcggcgtgtcgctctccaaggacctgatggcggtggccggagacgcgctgaagacgaacatcaccaccctcgggccgctcgtgctcccgttgtcggagcagctgctcttcatggccacattggttgccaagaaggtcctcaagatgaagatcaagccatacattcccgatttcaagctggcatttgagcatttctgcatccatgccggtggccgtgccgtgctggatgagctggagaagaacttggagttgactgactggcacatggagccatctaggatgacactgtaccggtttggcaacacatcgagcagctcactctggtatgagctggcgtacaccgaggcgaaggggaggatcaggaagcgggacaggatctggcagattgcatttggatctggtttcaagtgcaacagcgcagtctggaaggcgctgcaaacagtgaatccagcgaaggagaagaacccctggatggatgagattgacaacttcccggttgaagttccaaagatatcaaaggttggaaatgcatgacatgaaatgccttgtttgtctcaagagtagtaaaaagtatggtgggttgagtggcattgtgcattggcattggtagggcaggaagttcatcttcagggttctaaatccatttgcaattgttcaagagttctttggttttcagttgtagcatctgtgaggggaactttaaaaagaaaactgtagctgattcaattaggtagaaaaagggtgtgttttcttcacttagggctgtctgataatgctgtatttattcagattggagaaaacaattggagtcttcatgtgacgtttattcatcgttgcctgattgtgattgcccttgtagcactgtcacattctcattaaatttatctcattaaattgattggttt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0598800, RefSeq:Os06g0598800