Os09g0513300

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Revision as of 07:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0513300| Description = PEBP family protein| Version = NM_001189009.1 GI:297727148 GeneID:9268282| Length = 9013 bp| Definition = Oryza sat...")
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Gene Name

Os09g0513300

Description

PEBP family protein

Version

NM_001189009.1 GI:297727148 GeneID:9268282

Length

9013 bp

Definition

Oryza sativa Japonica Group Os09g0513300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20631409..20640421

Sequence Coding Region

20631409..20631766,20634825..20635041,20637119..20637159,20637422..20637465,20638188..20638225
,20638663..20638724,20640399..20640421

Expression

GEO Profiles:Os09g0513300

Genome Context

<gbrowseImage1> name=NC_008402:20631409..20640421 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:20631409..20640421 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacctgcctctacctccccaggttatggtggatcctgatgcgccaagtccaagcaaaccagaatacagggaatatttgcattgtatttaagaaggcaccttaccaacttctcatggagaagttgatcgggcaaattcttgcttgctgtgtactactaacaatgtggttggtgacagacatcccagaggcaatagatgcacgttttggcaatgaaatagttccgtacgaagctccacggccaccggctggaattcatcggcttgtttttgtgctattcaaacaggaagcacgacaaacagtttatgctccaggatggcggcaaaatttcaacgtcagagatttctctgcattttacaatcttggaccacctgttgctgcattatacttcaactgccagaaggagagtggtgttggtggcagaaggttcttgctgggcgttctccgccgtggcggtgatagaggggatcaacaagaacggcgagctggtgtcgctgtcagagcaggagctcgtagactgcaacgacgaggctgtggggtgcggcggtgggtacatgagctgttcgagttcatcgtcggcaaccacggcctcactagtcaccacggaggcgagctagccgtaccacgccgcgaacggcgcgtgccaggcggcgaaactgaaccagagcgcggtcagcatcgcgggctaccagaacgtgacaccagcagcgagcccgacttggcgagggctgtggcggcgcagccggtgtccgtcaccgtcgacgccggcaacttcatgttctag</cdnaseq>

Protein Sequence

<aaseq>MTCLYLPRLWWILMRQVQANQNTGNICIVFKKAPYQLLMEKLIG QILACCVLLTMWLVTDIPEAIDARFGNEIVPYEAPRPPAGIHRLVFVLFKQEARQTVY APGWRQNFNVRDFSAFYNLGPPVAALYFNCQKESGVGGRRFLLGVLRRGGDRGDQQER RAGVAVRAGARRLQRRGCGVRRWVHELFEFIVGNHGLTSHHGGELAVPRRERRVPGGE TEPERGQHRGLPERDTSSEPDLARAVAAQPVSVTVDAGNFMF</aaseq>

Gene Sequence

<dnaseqindica>8656..9013#5381..5597#3263..3303#2957..3000#2197..2234#1698..1759#1..23#atgacctgcctctacctccccaggtttcatactcttgcattgtgatgtcgatcaaaagattctctctccagctgagtgctcaccactcagagaagtatcattgaacacgaaatgactcatcgtaaacctttggcctagcccaggcaaggcgccatgcaggggaggctaactcttggagctttaaacatacctccagatctttggggaatatatgcatgaaaaactgaccatagatatcaatcacaaagaccatatgcaatacagaagcaactataagggaaataaatattatataaaaagcaagattccatttgctcatagtgctcaatggaatgttgtgaacataaagtggatgcttcactcctaatataaatttacatcgaaccgctctgttctttcccacagaaaatttgttagctagcccttccaccttattgaatatttcccaattcccttctcaccaaggatcaataaaattatgtcacgaggtagggatcctttggcattgagccaggtaattggcgatgtgttggatcctttcataaagtcagctgcaatgaggattaattatggtgagaaggagattacaaatggaactggagtacgatcatctgctgttttcactgcaccacatgttgagattgaaggtcgtgaccaaacgaagctctacacacttgtaagtgtcataatttgtaggatcatgatcagagtagtgtacaggtcttttgaaccattctgttaggtaaggtgaaaatgacttttgatccaaacaaagcttcaagttaaaaagatttctctcgtgtcagaagaggtaatatttattttctagaatattagataatttcttatggagtgactcatgcatatgcacactaattaatgaaacatgtttgttactccaggcaccctacgttttaaagaaataatgcacagatctaattagtgcttcaccagaaaaggccatctaacttgcacaagtatagattattcaacagatccataggtactgtcgataatagaaatatgagggatatagcttattaggtttcacagaatattgtagtggcaggaaaactaaatcataatgccagctggtatttgctaaaaaagtaatcatattgtaaccttttggtaatgatcaagtacacatatggtacaatctactttagaatatacttgtgcacccctgtcttgtttgtacactgtggtacaggaatattggataggataaggccctgtcatgtctgatttacttaaagtgagaaattgaatctctgctgtattaaagttggtaatttggcatactttctcatatcagcatcctttccacaacaatagacactgccacacatttcaaattatccatgaaatatcacgcactaaaatatccagcctgaactcactgtagaaaagtaagactgtaagatactaagctgatcccacttccctgcacagtgctgctctaaccactaataggcactctacaactttaattttatcacaaaacctcacataattagcatggagagggtgaaaacttatatggtttttattttttatggtctccagaatacctttttgtctctctttttttctgtttgctttattgagctatgccctaggtcctctataaggcatgcaactagtccttgatatctatgtctaaatgctaaaataaaaggttttccttttataaggttatggtggatcctgatgcgccaagtccaagcaaaccagaatacagggaatatttgcattggtgagcttattgaatttattatacaagcaaagagttgcataatgccttcctaaaaactcaacaaagccacattttgcaagaaaccaatgagtgctacttgccacactattgttatgtttatagttcaagaacaccttacctagataacctgcaggattggaatgcagccctctcgaaaaggaggggggtgtttcttatccaaccatcaacagctgaagaactcttgttctatatgctattgggtaagaaagtacaatttctgtgataacttaattcttttcatcaccataattccctcaacctaagtctctttgttcagattgtcatttcttatcatcaatcattagttcttaaattggcactattatgtagcttcaaaataaaattgccaatacttcaaactatttcatattatcttaatagtttatactttctagtatttaagaaggcaccttaccaacttctcatggagaaggtactctggaagtttgcctattaatttcttcatagataaagtaaggagaaaccagtcatgatcctgagtaactctaaggacatcattattgggtgctacaatcaattaacatatcaacataagatgataaactatgaaaaaacattaattgacggcattatttatgatatcagcatgaaggacttcatgtagatagcatgcatgcatgcaattatacggttacagggaaaaaatggctagaatttaaagataccttaaaaaagaaacatgtgctggagctaatgcttacaggtaatgtcacatatggctaaaataagtaaataacattaatgcgtgttaaattgaaatttatgtttttcttattatgtttataaacaagactaatggattttgtataatttgtaactgggaatactagtatcatggattttgaatactaatatcattataaataagaattgtaatatcattcttattatgtttataaacaagtgctggagctaatatcaaaatttgtaactgggaagtttatgattttgaatataattagaagctaactaatctagaagatgtattaagagccttgctatggcatattaatatagaagaactgtgccctttaccaccaaacaaacttatgagtaactaatcttaattaaactttcaaaggatgatctgatgtaacatgatggtcatttgcaacactgaattttttttttcagttgatcgggcaaattcttgcttgctgtgtactactaacaatgtggtaccataatatatctaaaatattatatattgattatctaatctaatccatgtttctgcaactcatatctccttacatagatttgcgtttttcataagagtaaagatttccaatttgaccatacatgaagtttctttaattaacatataacttatcatagtatcttattatttgtgtcctttacaagcagttcttacttctgagcctaatcaaagagctaaagctagggtcttgtttctttcttcttgttatttttctacaggttggtgacagacatcccagaggcaatagatgcacgttttggtgggtaacatcttactcctacataacctccaatgttgagtaattgcatgtacagatcagcaaacatttttattatacaaacagcaaaatcacttccaatatttgccatttgtttcaaacagaaatcatgatatttattgttgtatatggttgtaaacatttcacaagtacccttggcaatggaataaccacgtggttagtaaaatctatgtcaagttggaaaaataaatgatgatagagacaggagtaactatggaaatactactataactaatataactgtttggaaatatcgttggtttgatccaaccaaaataccaaataccttaatacttccatgaaataattgttttgctaaaattatgttagtgcatatatttccaagattttaagtaaacaagtttactgtatgaaacttgatgaattttatttgtatagtaggctggtgtttggggtgtcaaggtagaaatctacgagggtgttacatatgcaaaagtaaaagacatgataaaaatgctaaggaatgattcaaaagaatgcattggtcttcatagtttatgttactatcgaccatgattacacagtcaaattttgcaaagaaagtatagggagcttgagacaatcaatttatctcctgtactaagctaacaagacaaggatcaagtcaataattattttagatgtcatatacactgaaaatcaatggcattttcattaaaggtgcatttagtaggtcatctatcagactatcacataccgagattccttttctttaattggaaaatctagttctatatccctacacttgttgttcttttggatttaaggtgacattgcaaaaattaagaaaaaaacattaggtccctaattttaaagtaagtctgcgattgatctattgactactaaactatatacagtcatcttaaatatgcatacctgtgaatcaaatgtaaagcaacttagggagagggggatgggccccgctctaatgtatgactgcacctatttttgatgcaggttaagcagttggacggttgttatctgcccaacagcgcctcaagttgagtacctcagatcatctgtggggcccactgatgaaattagtatatgtggctattatggtattacctgcctatggttgaccaatggttctgttgtgtggggccccacagaaacacacacctaatctgtgtgacatacttcagatttttcaaacatgagatctttcatttccaagtgaaaacataatactatcgtttctggagttttaaggaaaaccaaggtgtaaagttatcacatgccctctgtccctccctaaagaagctgccaactaggaataatcatgtgagcaactgaaaataataatagttcaaaaacagcactactgttttcccacaaaaaacactagtagcattacaaattacagacttctttggagccaagctgcaatgctggagttataacttataagcataccttcggtagtgcatacatgaagcacgcctgatcctctcatctggctcatcccaaggatatcagagaggcacactcttttctgctaaattatcaagattgcaagtgattatttaaacatcaaatctagttttatgaatattgaaaaaaataaatgtaagtcacataatatactagaactcaggcatttactattttttattagtcacacactcacacttaatggtcacataataaaaatggttcacctcttttttttatatatgcattttcactagtgggatttcaactttaatatttattttcatgtggaagccatgacagatattcaggatgtgcaattggttgcaatacttctaaccataatgatatttcgtgaaacaacatgtaccacagggtattgtttatttgctttaattggcagcaagtggcacaggactgaagggtgggcagtaatgtcactgaatgactgaactataggacaatctataccacactatcaaggaacatgtagtctgtagagtgatgtggtgaaagctaacattcaccttgataatatgaaccacaacaaaacaaatctaataaagaatacacactgtttcaggcaatgaaatagttccgtacgaagctccacggccaccggctggaattcatcggcttgtttttgtgctattcaaacaggaagcacgacaaacagtttatgctccaggatggcggcaaaatttcaacgtcagagatttctctgcattttacaatcttggaccacctgttgctgcattatacttcaactgccagaaggagagtggtgttggtggcagaaggtaggaacaaatttaatattttacttaaagagagactaaaacaataaatattcatatattggtagtcatgaaatcacaggagccagatagactcatacaccccctctcaaaacataaccatgacatttttgattgaaaattcatagacttagacgtggcatctactctaacacaagcataagatttccaaagatgctctagagaaaagattctgaggatcgctaaagctcattgcatatatctggaagatacaaaataggtttattagtaatacacgtttcttcccagaatagtgaattcagagtagaatatcaacttaagttcctagcttagtacctttttaggacacgggtgcgcttactttaccctgttcatgataatgagcaagctttccatgacataagtgcacatatgtagttttaattaccatggcaattttgtcaacagaaataagccttctcgcatcctttttaatgctgaacaattattctactcactatatacacttccggtgtttcaaaagaaacaaacaatacattagattacaaagatggcatgtttatcccccctattcatatatgcaagaagccaagacctagacaccaaaacaataacaaactaggcatgctgtttttaggagaaaagccatcatttactaattctttttttctattctttgttaataggtttcagggaccaagttgaaggctggatgcaacatcattcaagattacaaaacataatgcacaaaacgcagttaacagcatatatatagcagttgacaatcaagtagtctagtaattgacttgtattgtatgaaataaattagaagtccaatatcttcatagtcacctattaatgctgatgttcatatcagtaattatgaggaatagtgcaacagttggtgttctctactttaaaatgaacacaaattagcacatacatatatgcaaatctgaattctttttactcgcagcatctaattgtggacatttttttctcattctttttttctaaagggtcacaaaaaaccaagttgaaactcatttatatggcatacaaaaccatatataccataacatttctagatacaggtgccagggcctgatttaaagtataatgaatggaagaaaggctaatatatccaaatacattgaatcaaaggaataaaccccagagatgaagaaccatttctagtttcctacagatagcaataattggatgcatccacacatggataaacgcaatgcaatggggatatcaatgagaaaagtaatgctcagtgttagatcccctaatttcagataatagccacaatgcagctagattactaataacaacaccaatcaatcagtcaccacagagtctcgcggaggccacaataaacaaattagtgatgcaagtggggcgggcaagcgagattattttgcccgcttatctcacttctagttcatttttccttccgaaatttatactatcatgtaagaaatgaactagcgagtgaatttttatgcgggtagtgagatcacccacttgcatccctagaacaaatgagaggggatcatggtaagagcataccgtcagcgcccgccgaacgattgagccggctgagacgaacacatttcagactctggcctactgctcatcgcgaccggcgagaaagtggggaatgggacgctcgcgcggcagtgccatgaacgggggacggcccttcttcgcctagtccgcgcctgcggccctgcagaatctgggatttggttagacggaggaagagcaaagtcgtcgacgacgacgacggcgaggtggggaggagggaggagtcgtctgtcgtcgtgcgacagtgagaagggggtagcctgccgccaaacctgaaccctgctaccgcggcggcgtagatagggttcggcagggcgccatggcgagctcatcgacgacgaggcggcggccgccggcggcggcggcgtcaggtcgcggcctcgcggaggagataaaccttgcggcggcgaccgcgctgcacgggccacgagcccatgagtcatctgggctctcaatgggctaatatgggccaggcctaatataagcattaaagaagaggactttacgttaggaataagttcatttaaggtcccttaacttgtcaacgaattctattttcgtccttcaaccgaaaaaccagatacaacgggtccctcaactatcaaaactagtgcagatgaggtccctcggcggtttggatggcggttttggttgacgtggcgcttacgtggctaatttgactcggtcttcatctgacgtagcattgacgtggcgcttacgtgacaattcgatccgaaaaataataaaactcatgggacccacatgtcagtttcaccgaaagaatgaattaaaaaatggtggggcccacatggccccacatatcattgtcacccctcctcttcttcctcctctctcaccatctctcccctctcctccctccaggcgccacggggccacggggaggtccggcggcggcagccggcgacgcgggagaagggtagtgggcagggcgtcggcggcgggagcgctaggtcttcgctcacggcgtcggcgcggaccccgcgcgtgggctcgtggaggagatcggggccgcggcgccgcccgtctccgacgagctggagctcgtgcgagcgtggtgccgggagctgcacgactgccgaagagaagcagaggaggttcgaggtgtacaggagcaacgttgagttatttgagaagttcaactccatgtgcaatggctacaagctggctgacaagaagtacgttcgccgacctgacgaacgaggagttcagagccaagatgctggggttcagacctcatgtcgcaattcctcaaagcaatgcctggagagagcagtgatgatattctgccgaagagcgtagattggaggaagaaaggagcagtggtggaagtggagtaccaagaagattgtggtgtgtgagcaatagcatggtaaagaaagattcaaacctgtaaaaatgttggagattaatcgatggaaatctgggtgttgtgtggatgcaggttcttgctgggcgttctccgccgtggcggtgatagaggggatcaacaagaacggcgagctggtgtcgctgtcagagcaggagctcgtagactgcaacgacgaggctgtggggtgcggcggtgggtacatgagctgttcgagttcatcgtcggcaaccacggcctcactagtcaccacggaggcgagctagccgtaccacgccgcgaacggcgcgtgccaggcggcgaaactgaaccagagcgcggtcagcatcgcgggctaccagaacgtgacaccagcagcgagcccgacttggcgagggctgtggcggcgcagccggtgtccgtcaccgtcgacgccggcaacttcatgttctag</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0513300, RefSeq:Os09g0513300