Os06g0600100

From RiceWiki
Revision as of 09:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0600100| Description = Similar to TAT-binding protein homolog (Fragment)| Version = NM_001064534.1 GI:115468799 GeneID:4341448| Length = 29...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0600100

Description

Similar to TAT-binding protein homolog (Fragment)

Version

NM_001064534.1 GI:115468799 GeneID:4341448

Length

2918 bp

Definition

Oryza sativa Japonica Group Os06g0600100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:24562182..24565099

Sequence Coding Region

24562233..24562446,24562757..24562854,24563329..24563616,24563700..24563863,24563999..24564254
,24564361..24564471,24564764..24564904

Expression

GEO Profiles:Os06g0600100

Genome Context

<gbrowseImage1> name=NC_008399:24562182..24565099 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:24562182..24565099 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacggcggacgtctcgcggccctcctcctccgcgccgacggcggcggctgcgggggcagacggccacggggcgaaggggagcgccttccgcggcgacgggctgcggccgtactaccagtcgcgcatccacgacctgcagctccagatccgccaagggacggacaacctcagccgcctcgaggcccagcggaacgtcctcaattcccaagttataacgctgggggaagagttgaaggtgctccatgaaccgggctcatatgttggtgaggttgtcaaggttatgggcaagtccaaggttctagtgaaggtgcacccagaaggaaaatatgttgttgatgtcgataaaagtattgatattacaaagctctcgccttcaacaagagttgctcttcgaaatgacagctatatgcttcatcttatcctgcccagcaaagttgatccattggttaatcttatgaaggttgagaaggttcctgattctacttatgatatgattggcggccttgatcagcagattaaggagatcaaagaggttattgagcttcccattaagcatcctgagctgtttgaaagtcttggaattgcccagccaaagggtgtccttctttacgggcctccgggtacaggaaaaacgctactagctcgggcagttgctcatcacaccgactgtacctttattagggtgtcaggttccgagttggttcagaagtatattggagagggttccagaatggttcgtgaactatttgtgatggccagagagcatgcaccatccataatctttatggatgaaatagactccattggatctgctagaatgcagtcaggatctgggggtggtgatagtgaggttcaacgcactatgcttgagcttctgaatcaacttgatggctttgaagcatcaaacaaaattaaggttcttatggcgacaaataggatggatattttggatcaagctctcctgaggcctggtcgcattgataggaagattgaatttccaaatccgaatgaagattcccgctttgatatcttgaagattcattcaagaaaaatgaacttgatgcgtggcattgatctgaaaaagattgcagagaagatgaatggggcatctggagcagagcttaaggcggtctgcacggaagcaggaatgtttgcccttcgcgagagaagggttcatgtcaaccaggaggatttcttgatggcggtggcgaaggtgatgaagaaggataccgaaaagaacatgtccctgcgcaagctctggaagtga</cdnaseq>

Protein Sequence

<aaseq>MATADVSRPSSSAPTAAAAGADGHGAKGSAFRGDGLRPYYQSRI HDLQLQIRQGTDNLSRLEAQRNVLNSQVITLGEELKVLHEPGSYVGEVVKVMGKSKVL VKVHPEGKYVVDVDKSIDITKLSPSTRVALRNDSYMLHLILPSKVDPLVNLMKVEKVP DSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA VAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMQ SGSGGGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRMDILDQALLRPGRIDRKIEF PNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR VHVNQEDFLMAVAKVMKKDTEKNMSLRKLWK</aaseq>

Gene Sequence

<dnaseqindica>52..265#576..673#1148..1435#1519..1682#1818..2073#2180..2290#2583..2723#agcgtcccgacgaaagagacgagacgaaacgaaaccctcgaactcgaagcaatggcgacggcggacgtctcgcggccctcctcctccgcgccgacggcggcggctgcgggggcagacggccacggggcgaaggggagcgccttccgcggcgacgggctgcggccgtactaccagtcgcgcatccacgacctgcagctccagatccgccaagggacggacaacctcagccgcctcgaggcccagcggaacgtcctcaattcccaaggtaaacgacgaccccctccccccgcgcgcggggcagtcgaatccgtctcgtggtttggttttaatcttgccgcgtttactcgcaaccctagtttcccgtctcgtgtgaatccccccctcagaggttcttgattttgtatcaagacttctatcttttatgtggtttctatgttcgtcgtccccgtttctgccgttgaatgaagtagtgatagtaggattctagactttctttgtattgggattcgtgctttgcggtataatgtgctaatatttttattttattttccctccttgcgattttgatgttgcagttataacgctgggggaagagttgaaggtgctccatgaaccgggctcatatgttggtgaggttgtcaaggttatgggcaagtccaaggttctagtgaaggtacatatcctttgctttcttgccttttcttagtgctgtgttttagtatttgtgcacatgagtgttgctttggagataatcggggaagataatattttgttggtgagacctttcttttagtcagatcatggctgcatatattttaaatttggatagaagctgcgatttgttttggtagcacccgaaagggagctttacaaaagtatgattgcgaatagtaaatagcagaaatatttttactctatagtgtgcagatgcaattatttatactcagtcaattaaatagagatcttgaagaagtgctatatggtcacttcatatgacatactatagtgataatagctttaaaatgtacgcaattattgcactaacacaacgatatcgtgtgggtattatgagagcagaaatttttagtaattctatcaaacatttggtaaatctttctgtgttaattgatcaattgcaatctttcaggtgcacccagaaggaaaatatgttgttgatgtcgataaaagtattgatattacaaagctctcgccttcaacaagagttgctcttcgaaatgacagctatatgcttcatcttatcctgcccagcaaagttgatccattggttaatcttatgaaggttgagaaggttcctgattctacttatgatatgattggcggccttgatcagcagattaaggagatcaaagaggttattgagcttcccattaagcatcctgagctgtttgaaagtcttggaattgcccagccaaaggttagaacttgtttatcagtttgcattttgtttggtatcaactgtcattattagtggaaaatattcacctttgatttttgcagggtgtccttctttacgggcctccgggtacaggaaaaacgctactagctcgggcagttgctcatcacaccgactgtacctttattagggtgtcaggttccgagttggttcagaagtatattggagagggttccagaatggttcgtgaactatttgtgatggccaggtaaacattttctgttgatgatacattgaaatttaccatatattcaatgggatctgaaaatccttcattgggaaggatgcttgcattgctttacactattcagtaggctgacgtctttggtttgaattttgacagagagcatgcaccatccataatctttatggatgaaatagactccattggatctgctagaatgcagtcaggatctgggggtggtgatagtgaggttcaacgcactatgcttgagcttctgaatcaacttgatggctttgaagcatcaaacaaaattaaggttcttatggcgacaaataggatggatattttggatcaagctctcctgaggcctggtcgcattgataggaagattgaatttccaaatccgaatgaagatgtaagtggcaatcacttcttttttttttctgcaagcagcagagttcatgctacttcatctcgtcatcagttctttagttacttaatcgcatctttttctcctgcagtcccgctttgatatcttgaagattcattcaagaaaaatgaacttgatgcgtggcattgatctgaaaaagattgcagagaagatgaatggggcatctggagcagagcttaaggtgtgtatagttgacacttatgagccaattttctaaaatacttctcatttcaagctgatacaaatatcatgaactgaaacaaatccaggcccagttataattttgatccatatagttggtacaaccaacatttatatgagaactgctaaataccatgaaaaagtctgctcattgttttagtgctgcatgacaatgcactccattttgcatctgttgtgctccatattgatgctatcagctatatcactgtacataagttactcaccttgattttcacctttctgggtttcaggcggtctgcacggaagcaggaatgtttgcccttcgcgagagaagggttcatgtcaaccaggaggatttcttgatggcggtggcgaaggtgatgaagaaggataccgaaaagaacatgtccctgcgcaagctctggaagtgaaggaagctctcatctcgacatccctgtcatatgcctaaacagctgaagctaaacagcgccagcgatgcattgatcgctgtaaattccttaaaacatgtcgagaagggaaacgttcaacatcttacagtagcttcttttaaagttatagaattccttcattggattatcaagatgtgaaatgaaaaggtttagatc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0600100, RefSeq:Os06g0600100