Os01g0100800

From RiceWiki
Revision as of 18:42, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0100800

Description

Protein of unknown function DUF1664 family protein

Version

NM_001048274.1 GI:115433961 GeneID:4326458

Length

4636 bp

Definition

Oryza sativa Japonica Group Os01g0100800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:28818..33453

Sequence Coding Region

28940..28976,29146..29228,29735..29806,29885..29963,30258..30325
,30505..30606,31377..31466,31542..31616,31712..31744
,31828..31905,32274..32330,32400..32471,32543..32617
,32975..33124

Expression

GEO Profiles:Os01g0100800

Genome Context

<gbrowseImage1> name=NC_008394:28818..33453 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:28818..33453 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgctgggaaagatcgtcatcgtcatcggctccggaatcgttgggacattactcaccagcggagaggccaagattgcgctccccgattttagggatgtgctctctggtgccttcaagtttgtgaccaagcaagacaaaaaggatggcccatccaccagcagccctcacgctgctcacttgctatctcaggtcaatcatctcagagaggacctccaacttttgtccaggtcaaatcaagttgctattgtcaccgtcgatggtagaccaggccctggtgcttatggtataacagctgttgttgctggggctatcggctatttatacataaggtggaagggttggaaactttctgatttgatgtttgtgacgaagcgtggcttatctgatgcctgcgatgtggttggcaaacagttggaacatgtttcagagaatgttaatgctgcaaagaggcatctggcaggaagaatagatcatgtagattgtactttagatgaatgccaggaaattacagaatccacaagaaaagaggttacagtcatccatgaagatataagtgccttccaggaggaaatgcaatcagttcatcttgtggttcgtactctggagacaaagcttggacgtctttcatatacccaagatcgtacagcacgaggaatttatgacttatgcgagttcactaaaaggctggataagagccccaaaactgatactcgtcaggtcttatcatcaactcctcttccagctattgaattgccagagagaattacaagggctgcttctttgcctccaagttcagaaccggagttttctggccctcgatcacctgtaacagaggcatctaaggttgtgcattctcctacaactatgtcggcatcaggactgagtatgctagttgaaacatcaatgccacctaaaaggggtgttttgagccgagcaagttctatgaaagaaggatcccaggagctatcaaatgggtcatcaagttcaggggaaccaaccactgggaggaatgttccaaattcaagactgtttggagggtttggttttttgaagagttctgccagttga</cdnaseq>

Protein Sequence

<aaseq>MVLGKIVIVIGSGIVGTLLTSGEAKIALPDFRDVLSGAFKFVTK QDKKDGPSTSSPHAAHLLSQVNHLREDLQLLSRSNQVAIVTVDGRPGPGAYGITAVVA GAIGYLYIRWKGWKLSDLMFVTKRGLSDACDVVGKQLEHVSENVNAAKRHLAGRIDHV DCTLDECQEITESTRKEVTVIHEDISAFQEEMQSVHLVVRTLETKLGRLSYTQDRTAR GIYDLCEFTKRLDKSPKTDTRQVLSSTPLPAIELPERITRAASLPPSSEPEFSGPRSP VTEASKVVHSPTTMSASGLSMLVETSMPPKRGVLSRASSMKEGSQELSNGSSSSGEPT TGRNVPNSRLFGGFGFLKSSAS</aaseq>

Gene Sequence

<dnaseqindica>123..159#329..411#918..989#1068..1146#1441..1508#1688..1789#2560..2649#2725..2799#2895..2927#3011..3088#3457..3513#3583..3654#3726..3800#4158..4307#ggcaagatcccacgggcgatgcgaacgagcaccggatccgctgcggctgctcggcgtcgggtcggaggtgaggtctcgaaaccctagctgctccgacgacgatcgtggcagccgccgtcgccatggtgctgggaaagatcgtcatcgtcatcggctccggtagggatccactctcgcgatttctgtgcgtctaatctgtatgtatagggtagcttggcccaatcccccctctctctcgttagcctctagctcgattcgctcctgctcctgtttgttgcttcatttactggagtagcttcgattagctttacttgtttggaaattgcaggaatcgttgggacattactcaccagcggagaggccaagattgcgctccccgattttagggatgtgctctctggtgccttcaaggttgttcttttttctttcaatttcaatcattccttcctttcagtagtattttgtttttatttagagtaaatttcacaaaactacatattttatggttcacgttgcagaaaaccacatattttgatacttggcacttaagtacatatattttggtagtttagtttcacaaaaccacactatcgatgaatggattcacttgtgatatgacgacgtggttgtttcatctagtatgaggacgtggcatcatattaatttcgtgcgatggctggtaataggatgccatgtcctcgtcctaggtgaaacagccacatcatctcgcgggtgaatctatacatcgataatgtagttttgtgaaactacacgaccaaaatatatgtactcaagtgccaagtgtcaaagtgcgtgtggttttctgcaacttgtaccacaaaatatgtagttttgtgaaatttactcttttatttaagacataaaaggttcctttgctcctttgctctgctctctagtttgtgaccaagcaagacaaaaaggatggcccatccaccagcagccctcacgctgctcacttgctatctcaggtctcccactcgtcatctcttactgtacttcatcgctggatggctccatgattaacccactgctcatctaactattaggtcaatcatctcagagaggacctccaacttttgtccaggtcaaatcaagttgctattgtcaccgtcgatggtagaccaggtctctcccattcttctctgttctgttgtatctgcagtgtgcttttttcctggaattattaaccataacctattaacctagtgatatttatgttttctttaccgtccatatcgtttttcctgccaaccattatcttggaggaatacattaagcccattttctgatctaactaatttatggaaacttgctcgtgaaatcgtttgatgcccttttggacaccaaatttttgtatgtaatttttgcagctacttcattgtcttctatactaacgctgacaaattctttcttttgcaggccctggtgcttatggtataacagctgttgttgctggggctatcggctatttatacataaggtggaaggtaaaagtaatcactgattctcaacttggcagaagggtgctattgaacaattataaacacatcatcttagactatcagacaagcaaagttttctctttttctctctccttccttttcattttagggcaactgtcataatccacaaaatggggcaatcaagctaactcggtgatttacagggttggaaactttctgatttgatgtttgtgacgaagcgtggcttatctgatgcctgcgatgtggttggcaaacagttggaacatgtttcagagaatgttaatgtaagtttctccttcgttcactggaatatgaatattgcactatttgaagcttttacatgcatactgcaatgatcctatatttctctctttgggaagttggaactgttgtttgttgaatggagttcaatcctttaacatcccgttaaagtttgtggcatactgtatgtcaatcactattggactgccacctcaaatgagagagtacacatcaggccgctcaattaaaatggttaaaggggaaatatctagtgaaaaccatcaaataaatgaaaacctgtgaaaaccggaccgaatctaaattcataacagtttcctattactgttcacctgaaatttgtcttttttgttcctcccaaatgaagttgagtttttacttaagatttggtgggaatgttgcctctagtttttttttcatgaatttagagaacttttaggtccggttttcacttatttgatggttttcaccagatatgtccacatggttagaataccttggatttgcaggatgacctttcttggatatgaacatttacaattatgtgttgtttttgtatatggcatctttataattctattaagcattcttgacctatttggaccaaacaagaaaagttaacctgagaaaacaaaacagaatctatgattcccacctcccactagatatgcctctgaacattttgaggctagctttgttatactgttgcatctgcgtgtgcttactcccactgtttgattcaaattcgtgtttatgtgcaatcttctgatatcaggctgcaaagaggcatctggcaggaagaatagatcatgtagattgtactttagatgaatgccaggaaattacagaatccacaagaaaagaggtttgaatgctcaagcattatgttaataggattttatatagtttattggaggttgatacaaaattaattcaataggttacagtcatccatgaagatataagtgccttccaggaggaaatgcaatcagttcatcttgtggttcgtactctggtaggtgccttgtattccgcatacacttctttttcaagataactcttttcctcactggtgctagatggaaactgacttcttcccttgtactacaggagacaaagcttggacgtctttcatatacccaagtaattaagagtttgcaacaatataacttgctttacccccagaaatatgcattttgctaacctcttttactgaaatgtcttaggatcgtacagcacgaggaatttatgacttatgcgagttcactaaaaggctggataagagccccaaaactgatactcgtcaggcaagttagcacaatgcccaaaagctatttttggcagaccttgctatgttgctagcctgaacttctattcccttacgatcccatactagaacattattgatataaaaaggcatacacttacacatgagtttctgatagattgtgtaaaatgactgctcagacattgatttggcattataagttatgatatggctcctacatgaccaactttaatctatttcttttgatccatgagatatccctcaggcaatgtccctcgacacagtttctggcgtgataccaattacgatgtattaagtggcaccatgaagctttcttatatcatccttctatactgatagtcttgatttttcttaatcgatttccaggtcttatcatcaactcctcttccagctattgaattgccagagagaattacaagggtaaagttgtgcacctttttgaatgttaacatgatttggattatctgaccttttattttcttaccacaggctgcttctttgcctccaagttcagaaccggagttttctggccctcgatcacctgtaacagaggcatctaaggtcaggtctggttttgtgtctgaggacatgtttgacctgggttattgcatctaattatttttcttttgcaggttgtgcattctcctacaactatgtcggcatcaggactgagtatgctagttgaaacatcaatgccacctaaaagggtaatatcatctaacatgcttttaaattgaatagagcgactcatggcctattaagtgttaatgcttacgctgggaaagatgaagcacttcgcctgatgattatagacattggaaatactagctgtttacaaagacgatggtgtattgactatgcttgagtgaacacattaatagtgagtctgcgttatactttctggcaatatgcccgagcttttatcacttttcgttgctcgactaggtgtgccattgttgttaccttccaaaactctatagcactaaatgcaaaccagaacgtaaggagtgtgtatgccctaaactgagcagcttaagttgtcttaatcctgcatgaatctccagggtgttttgagccgagcaagttctatgaaagaaggatcccaggagctatcaaatgggtcatcaagttcaggggaaccaaccactgggaggaatgttccaaattcaagactgtttggagggtttggttttttgaagagttctgccagttgagatacatggcattgtcatggttttacccaaaggagttggattgacctttacgtgtatatgtattgctagctactaggtgccagtagaaaaatatgcagttgccccatggcatcactttcacctattggaagtgccaattttttgtagaaattaattaatctatataccaaatacaaatgcattgcagagatatactgtttgtcggttgtggttgtaaaaaaaaactcgtaggggcagaaagagacacctgattgcgtcttgttgcagcaagtttgtttggggaggatgtactggaataagggtatagtagtagtaggaattattatggc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0100800, RefSeq:Os01g0100800