Os01g0104000
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os01g0104000 |
|---|---|
| Description |
C-type lectin domain containing protein |
| Version |
NM_001048296.1 GI:115434005 GeneID:4326291 |
| Length |
3473 bp |
| Definition |
Oryza sativa Japonica Group Os01g0104000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:205134..208606 |
| Sequence Coding Region |
205450..206029,206706..207276,207408..207836,208438..208525 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:205134..208606 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:205134..208606 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcggcggccatcctccgcttcttcttcttcttcttcttcttcatcctgcccgcctccctcaccgccaccgcctccacctccacctcatcatgccctgatggttggcaaatcactcctgctctcgacaagtgtttcatctacatacctacacccctttcttgggacagatccgaggctctctgccgcaacaacttcaccgctcatttggctgccctatcatcacttcaagacctcaatcttgcaaagtctctctgtggaccttccccctctggatgctgggtcggaggtcatcgcaacaacactgcctcggcttttgcttggaaatggtccgatgattcatcttcttggaatgatactgccttccctgctgacccattgcgcgccaactgcagcactactgggtgtgctcttgctaccaccaatgatgcatgcactttggttaccaatacccatgccgcacttaccgcaaaaagatgcagcgactcacatggactcatctgtatgatcaatcatgaagaccgatgctaccatgatcactgccacaaggagtatttcatagtgctcgtcgttgtaagcggattcattctcttgaccactctagcagtagtagtttggctacttgtctataggcgaagcaagaggaggagaagatcgcgtgaaggttccagtacttcagctaccgcgttagttccaccgctatggaaagtgttcaccagtgaagaacttagatcaatcacaaagaacttcagtgagggcaaccggcttcctgggaatgcaaagactggtggaacctatagcggaattttgccagatggatccagagtagcaatcaagaggctgaagagatcaagcctacaaaggaaaaaagatttctactctgagattgggagagttgcaaagctgtatcatcctaatttagttgcagtaaaaggatgttgttacgatcatggtgaccgctttattgtttatgagtttgttgccaatgggccgttggatgtttggctacatcatgtccctagaggagggcggtgccttgattggccaatgaggatgagagttgctacaactcttgcacaagggatcgcatttttgcatgacaaggtgaagccgcaggtcgtgcaccgtgatatccgtgcaagcaacgtgctacttgacgaggaatttggttcccatctgatgggggttgggctgtccaagtttgtaccatgggaagtaatgcacgagaggactgtgaaggctgcaacctatgggtaccttgctcctgaattcatatacaggaatgaactgacaacaaagagcgatgtctacagctttggtgtgctccttctagagatcatcagtggccgtcggcctactcagtctgtcgagtctgttggatggcagactatatttgagtgggcaacacctctagtccagtcacaccggtacctagagctgttagacccactgattcaggagttgccagatgtaggtgtcatccagaaagttgttgacttggtctatgcctgcacccagcatgtcccttcggtgcgaccaaggatgtctcatgtggtccatcagctccagcaacttgagctaaagtcagcagcatcagaacaactgagcggcacaagcactagcgctacatctccaatgttaccattggaggttcggactcctcgctga</cdnaseq> |
| Protein Sequence |
<aaseq>MAAAILRFFFFFFFFILPASLTATASTSTSSCPDGWQITPALDK CFIYIPTPLSWDRSEALCRNNFTAHLAALSSLQDLNLAKSLCGPSPSGCWVGGHRNNT ASAFAWKWSDDSSSWNDTAFPADPLRANCSTTGCALATTNDACTLVTNTHAALTAKRC SDSHGLICMINHEDRCYHDHCHKEYFIVLVVVSGFILLTTLAVVVWLLVYRRSKRRRR SREGSSTSATALVPPLWKVFTSEELRSITKNFSEGNRLPGNAKTGGTYSGILPDGSRV AIKRLKRSSLQRKKDFYSEIGRVAKLYHPNLVAVKGCCYDHGDRFIVYEFVANGPLDV WLHHVPRGGRCLDWPMRMRVATTLAQGIAFLHDKVKPQVVHRDIRASNVLLDEEFGSH LMGVGLSKFVPWEVMHERTVKAATYGYLAPEFIYRNELTTKSDVYSFGVLLLEIISGR RPTQSVESVGWQTIFEWATPLVQSHRYLELLDPLIQELPDVGVIQKVVDLVYACTQHV PSVRPRMSHVVHQLQQLELKSAASEQLSGTSTSATSPMLPLEVRTPR</aaseq> |
| Gene Sequence |
<dnaseqindica>2578..3157#1331..1901#771..1199#82..169#acctctactccattcctctttctttgttcatcatcaaggaaggaagggcaaggccgcaagggaagacacggatcggcggccatggcggcggccatcctccgcttcttcttcttcttcttcttcttcatcctgcccgcctccctcaccgccaccgcctccacctccacctgtatgtattccctcctcgcctcgcctgcctcataggagtactactttctttctctactgcttctactacacttgactagatccctactactccagttagtactaggggcgctgcatccatcacttctttccctatctctctcgccaacctcaacctgcatgcatctctcttctatttcttctttctactctccttttgcccttgcttcctccctcctaataactactcttccacatcaatctgtctgtcacaaacaagcaacgaattcctctcttacatcttcttcttcttcttctacactcgcacacaaatttatatataaaacaagatttctttttttttccccgccacctacaccctttcttcggctacactttctccgcacgaccatgtaaatgtaatggggataccattagtatattattaataattaatttacgacctgtgttgtgttcatcctcatgtctgtcacaccttcttctttaacttcactatactctactgtcgtccttgtatcagatgccagggttctcattattcatacttactaccttattattattattattattattattaactgccacccatttctctgcagcatcatgccctgatggttggcaaatcactcctgctctcgacaagtgtttcatctacatacctacacccctttcttgggacagatccgaggctctctgccgcaacaacttcaccgctcatttggctgccctatcatcacttcaagacctcaatcttgcaaagtctctctgtggaccttccccctctggatgctgggtcggaggtcatcgcaacaacactgcctcggcttttgcttggaaatggtccgatgattcatcttcttggaatgatactgccttccctgctgacccattgcgcgccaactgcagcactactgggtgtgctcttgctaccaccaatgatgcatgcactttggttaccaatacccatgccgcacttaccgcaaaaagatgcagcgactcacatggactcatctgtatgatcaatcatggtgagtatcccttttgctaatactggtgccatctgtataatctattatctctttatcacaaatcattatttcctctcaccatatgcaaatatgtttgttctgtactgctgatcaactctactttatgtcagaagaccgatgctaccatgatcactgccacaaggagtatttcatagtgctcgtcgttgtaagcggattcattctcttgaccactctagcagtagtagtttggctacttgtctataggcgaagcaagaggaggagaagatcgcgtgaaggttccagtacttcagctaccgcgttagttccaccgctatggaaagtgttcaccagtgaagaacttagatcaatcacaaagaacttcagtgagggcaaccggcttcctgggaatgcaaagactggtggaacctatagcggaattttgccagatggatccagagtagcaatcaagaggctgaagagatcaagcctacaaaggaaaaaagatttctactctgagattgggagagttgcaaagctgtatcatcctaatttagttgcagtaaaaggatgttgttacgatcatggtgaccgctttattgtttatgagtttgttgccaatgggccgttggatgtttggctacatcatgtccctagaggagggcggtgccttgattggccaatgaggatgagagttgctacaactcttgcacaagggatcgcgtaagtcatcctagccatctgtacagaatctttgattacttgcctatttttcacaaacatgttactctacttcttactgagatgtttaggtccctctaacatagatccatgcataaacctagcttgcgtgcactcgtgtgcatgcagatttttcgtaccgcttgcatgcgcctgcctgcactaatttatatccagacctatttggaactcatttgggttaccattttaggatggtttgtctttgcattaaatttcaaggtttcattcagagttttgttgtttcccgtcattcagctcccatggttgatcattatatgtttttggttgcttattaattgacaccggtgggctgcataaatgtacgtggtagcatgcatgggaaaccactaagtatacttacactttaattatgtcataataaagacaattagagaagccacctgttgtcttacggttctatcgctgcaggtgcatgattctagagttctcgaattatattgatggcttctacatccatataatcttttaaagctatattactcaagagtgttgtttgggttcccgtggaactaaaattaggccaaatgcgtatacgtcaatgcaagcccttatggcgttgtgttttgttttgctactattagttgctatttacttaccagtgctcattttgatccagatttttgcatgacaaggtgaagccgcaggtcgtgcaccgtgatatccgtgcaagcaacgtgctacttgacgaggaatttggttcccatctgatgggggttgggctgtccaagtttgtaccatgggaagtaatgcacgagaggactgtgaaggctgcaacctatgggtaccttgctcctgaattcatatacaggaatgaactgacaacaaagagcgatgtctacagctttggtgtgctccttctagagatcatcagtggccgtcggcctactcagtctgtcgagtctgttggatggcagactatatttgagtgggcaacacctctagtccagtcacaccggtacctagagctgttagacccactgattcaggagttgccagatgtaggtgtcatccagaaagttgttgacttggtctatgcctgcacccagcatgtcccttcggtgcgaccaaggatgtctcatgtggtccatcagctccagcaacttgagctaaagtcagcagcatcagaacaactgagcggcacaagcactagcgctacatctccaatgttaccattggaggttcggactcctcgctgaaatccactgctagaggaaaaccaattcagtagtttccgatgtcagtcagctggcagcacatctattgaagtgtctgcttaactagtactaggagaagtacttgaggggagaagttaggacccccataggccaaaccaaattaacctttgtgtagcaatgggctgtttgttgttaaaatggtcattgcccatgtgtacttgagttggcctctatgtagaagatatcagtttagtgagcacaaatttctgaatggttgtaatagtgaccttatctatatatctacatttgatagaaggtgtgataatatcttcctgtc</dnaseqindica> |
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